RNA–Protein interactions for RNA: ENST00000479458.1

HMGCL-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 3

Gene HMGCL, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-205ENST00000479458 CAMTA1Q9Y6Y1 1673 aa11.34□□□□□ -0.59
HMGCL-205ENST00000479458 ARHGEF10O15013 1369 aa11.34□□□□□ -0.59
HMGCL-205ENST00000479458 FAM83GA6ND36 823 aa11.34□□□□□ -0.59
HMGCL-205ENST00000479458 TECPR2O15040 1411 aa11.34□□□□□ -0.59
HMGCL-205ENST00000479458 SPATA31A5Q5VU36 1347 aa11.34□□□□□ -0.59
HMGCL-205ENST00000479458 SPATA31A7Q8IWB4 1347 aa11.34□□□□□ -0.59
HMGCL-205ENST00000479458 FMN2Q9NZ56 1722 aa11.33□□□□□ -0.6
HMGCL-205ENST00000479458 KRT28Q7Z3Y7 464 aa11.33□□□□□ -0.6
HMGCL-205ENST00000479458 COL14A1Q05707 1796 aaKnown RBP11.33□□□□□ -0.6
HMGCL-205ENST00000479458 SPATA31E1Q6ZUB1 1445 aa11.33□□□□□ -0.6
HMGCL-205ENST00000479458 A0A0G2JS52 829 aa11.32□□□□□ -0.6
HMGCL-205ENST00000479458 HAP1P54257 671 aaPredicted RBP11.32□□□□□ -0.6
HMGCL-205ENST00000479458 MYT1Q01538 1121 aa11.32□□□□□ -0.6
HMGCL-205ENST00000479458 PSME1Q06323 249 aa11.32□□□□□ -0.6
HMGCL-205ENST00000479458 RPGRIP1LQ68CZ1 1315 aa11.31□□□□□ -0.6
HMGCL-205ENST00000479458 PPLO60437 1756 aa11.31□□□□□ -0.6
HMGCL-205ENST00000479458 ANKRD30BQ9BXX2 1392 aa11.3□□□□□ -0.6
HMGCL-205ENST00000479458 TRIM37O94972 964 aa11.3□□□□□ -0.6
HMGCL-205ENST00000479458 APBA3O96018 575 aa11.3□□□□□ -0.6
HMGCL-205ENST00000479458 RGPD3A6NKT7 1758 aaPredicted RBP11.3□□□□□ -0.6
HMGCL-205ENST00000479458 RGPD4Q7Z3J3 1758 aa11.3□□□□□ -0.6
HMGCL-205ENST00000479458 FAM182BQ5T319 152 aa11.29□□□□□ -0.6
HMGCL-205ENST00000479458 CASZ1Q86V15 1759 aa11.28□□□□□ -0.6
HMGCL-205ENST00000479458 NRXN1Q9ULB1 1477 aa11.28□□□□□ -0.6
HMGCL-205ENST00000479458 CABLES1Q8TDN4 633 aa11.28□□□□□ -0.6
HMGCL-205ENST00000479458 BTG4Q9NY30 223 aa11.28□□□□□ -0.6
HMGCL-205ENST00000479458 KNDC1Q76NI1 1749 aa11.28□□□□□ -0.6
HMGCL-205ENST00000479458 IFT172Q9UG01 1749 aa11.28□□□□□ -0.6
HMGCL-205ENST00000479458 C11orf95C9JLR9 678 aaPredicted RBP11.27□□□□□ -0.61
HMGCL-205ENST00000479458 CAPN15O75808 1086 aa11.27□□□□□ -0.61
HMGCL-205ENST00000479458 CACNB1Q02641 598 aaPredicted RBP11.27□□□□□ -0.61
HMGCL-205ENST00000479458 TRIM26Q12899 539 aaPredicted RBP11.27□□□□□ -0.61
HMGCL-205ENST00000479458 RGL3Q3MIN7 710 aa11.27□□□□□ -0.61
HMGCL-205ENST00000479458 ABCC11Q96J66 1382 aa11.27□□□□□ -0.61
HMGCL-205ENST00000479458 RGPD8O14715 1765 aaPredicted RBP11.26□□□□□ -0.61
HMGCL-205ENST00000479458 PHF8Q9UPP1 1060 aa11.26□□□□□ -0.61
HMGCL-205ENST00000479458 SPATA31A1Q5TZJ5 1347 aa11.26□□□□□ -0.61
HMGCL-205ENST00000479458 NRKQ7Z2Y5 1582 aa11.25□□□□□ -0.61
HMGCL-205ENST00000479458 SIRT1Q96EB6 747 aa11.25□□□□□ -0.61
HMGCL-205ENST00000479458 ZNF219Q9P2Y4 722 aaPredicted RBP11.25□□□□□ -0.61
HMGCL-205ENST00000479458 ADGRF5Q8IZF2 1346 aa11.24□□□□□ -0.61
HMGCL-205ENST00000479458 ALS2Q96Q42 1657 aa11.24□□□□□ -0.61
HMGCL-205ENST00000479458 TRPM3Q9HCF6 1732 aaPredicted RBP11.23□□□□□ -0.61
HMGCL-205ENST00000479458 PLSCR1O15162 318 aa11.23□□□□□ -0.61
HMGCL-205ENST00000479458 GIGYF1O75420 1035 aaPredicted RBP11.23□□□□□ -0.61
HMGCL-205ENST00000479458 BARGINQ6ZT62 677 aa11.23□□□□□ -0.61
HMGCL-205ENST00000479458 MAP3K5Q99683 1374 aa11.23□□□□□ -0.61
HMGCL-205ENST00000479458 MYOM1P52179 1685 aa11.23□□□□□ -0.61
HMGCL-205ENST00000479458 CRYBG1Q9Y4K1 1723 aa11.23□□□□□ -0.61
HMGCL-205ENST00000479458 NUTM2FA1L443 756 aa11.22□□□□□ -0.61
HMGCL-205ENST00000479458 PIK3C2GO75747 1445 aa11.22□□□□□ -0.61
HMGCL-205ENST00000479458 PTGER2P43116 358 aa11.22□□□□□ -0.61
HMGCL-205ENST00000479458 SYT17Q9BSW7 474 aa11.22□□□□□ -0.61
HMGCL-205ENST00000479458 WAPLQ7Z5K2 1190 aa11.21□□□□□ -0.61
HMGCL-205ENST00000479458 DLC1Q96QB1 1528 aa11.2□□□□□ -0.62
HMGCL-205ENST00000479458 ANKARQ7Z5J8 1434 aa11.19□□□□□ -0.62
HMGCL-205ENST00000479458 DHX57Q6P158 1386 aaKnown RBP11.19□□□□□ -0.62
HMGCL-205ENST00000479458 PDE3BQ13370 1112 aa11.19□□□□□ -0.62
HMGCL-205ENST00000479458 SBF2Q86WG5 1849 aa11.19□□□□□ -0.62
HMGCL-205ENST00000479458 PLEKHH1Q9ULM0 1364 aa11.18□□□□□ -0.62
HMGCL-205ENST00000479458 LMOD2Q6P5Q4 547 aa11.18□□□□□ -0.62
HMGCL-205ENST00000479458 SGIP1Q9BQI5 828 aa11.18□□□□□ -0.62
HMGCL-205ENST00000479458 FHDC1Q9C0D6 1143 aaPredicted RBP11.18□□□□□ -0.62
HMGCL-205ENST00000479458 C14orf93Q9H972 538 aaKnown RBP11.17□□□□□ -0.62
HMGCL-205ENST00000479458 PARP4Q9UKK3 1724 aaKnown RBP11.17□□□□□ -0.62
HMGCL-205ENST00000479458 PEAK1Q9H792 1746 aa11.16□□□□□ -0.62
HMGCL-205ENST00000479458 STAC3Q96MF2 364 aa11.16□□□□□ -0.62
HMGCL-205ENST00000479458 ANO8Q9HCE9 1232 aaPredicted RBP11.16□□□□□ -0.62
HMGCL-205ENST00000479458 PRDM11Q9NQV5 511 aa11.16□□□□□ -0.62
HMGCL-205ENST00000479458 THRAP3Q9Y2W1 955 aaKnown RBP11.16□□□□□ -0.62
HMGCL-205ENST00000479458 GOLGB1Q14789 3259 aaKnown RBP11.16□□□□□ -0.62
HMGCL-205ENST00000479458 SHANK3Q9BYB0 1731 aa11.15□□□□□ -0.62
HMGCL-205ENST00000479458 CFAP70Q5T0N1 1121 aa11.15□□□□□ -0.62
HMGCL-205ENST00000479458 TMEM132EQ6IEE7 984 aa11.15□□□□□ -0.62
HMGCL-205ENST00000479458 DCAF11Q8TEB1 546 aa11.15□□□□□ -0.62
HMGCL-205ENST00000479458 MTFR1LQ9H019 292 aa11.15□□□□□ -0.62
HMGCL-205ENST00000479458 YTHDC2Q9H6S0 1430 aaKnown RBP11.15□□□□□ -0.62
HMGCL-205ENST00000479458 GPRASP1Q5JY77 1395 aa11.15□□□□□ -0.63
HMGCL-205ENST00000479458 KDM2AQ9Y2K7 1162 aa11.14□□□□□ -0.63
HMGCL-205ENST00000479458 BCL9O00512 1426 aa11.14□□□□□ -0.63
HMGCL-205ENST00000479458 ADGRB1O14514 1584 aa11.13□□□□□ -0.63
HMGCL-205ENST00000479458 OVOS2A0A0G2JMS6 1433 aa11.13□□□□□ -0.63
HMGCL-205ENST00000479458 OVOS2A0A0J9YW53 1432 aa11.13□□□□□ -0.63
HMGCL-205ENST00000479458 OVOS2Q6IE36 1432 aa11.13□□□□□ -0.63
HMGCL-205ENST00000479458 SSH2Q76I76 1423 aa11.13□□□□□ -0.63
HMGCL-205ENST00000479458 ZBTB7AO95365 584 aa11.13□□□□□ -0.63
HMGCL-205ENST00000479458 TCP11L2Q8N4U5 519 aa11.13□□□□□ -0.63
HMGCL-205ENST00000479458 SIN3AQ96ST3 1273 aa11.13□□□□□ -0.63
HMGCL-205ENST00000479458 PDGFDQ9GZP0 370 aaPredicted RBP11.13□□□□□ -0.63
HMGCL-205ENST00000479458 STK26Q9P289 416 aa11.13□□□□□ -0.63
HMGCL-205ENST00000479458 DSG3P32926 999 aa11.12□□□□□ -0.63
HMGCL-205ENST00000479458 AATKQ6ZMQ8 1374 aa11.12□□□□□ -0.63
HMGCL-205ENST00000479458 KIAA0232Q92628 1395 aa11.12□□□□□ -0.63
HMGCL-205ENST00000479458 PLEKHG5O94827 1062 aa11.11□□□□□ -0.63
HMGCL-205ENST00000479458 HSPA6P17066 643 aa11.11□□□□□ -0.63
HMGCL-205ENST00000479458 PROM2Q8N271 834 aa11.11□□□□□ -0.63
HMGCL-205ENST00000479458 BCL11BQ9C0K0 894 aaPredicted RBP11.11□□□□□ -0.63
HMGCL-205ENST00000479458 PHRF1Q9P1Y6 1649 aaKnown RBP11.1□□□□□ -0.63
HMGCL-205ENST00000479458 SLC15A2Q16348 729 aa11.1□□□□□ -0.63
HMGCL-205ENST00000479458 ARXQ96QS3 562 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms