RNA–Protein interactions for RNA: ENST00000479414.1

CCDC58-204, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3

Gene CCDC58, Length 431 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-204ENST00000479414 LIAT1Q6ZQX7 453 aa11.22□□□□□ -0.61
CCDC58-204ENST00000479414 ERICH6Q7L0X2 663 aa11.22□□□□□ -0.61
CCDC58-204ENST00000479414 TBC1D2BQ9UPU7 963 aa11.22□□□□□ -0.61
CCDC58-204ENST00000479414 GPKOWQ92917 476 aaPredicted RBP eCLIP11.21□□□□□ -0.61
CCDC58-204ENST00000479414 TRIM32Q13049 653 aa11.2□□□□□ -0.62
CCDC58-204ENST00000479414 POM121Q96HA1 1249 aa11.2□□□□□ -0.62
CCDC58-204ENST00000479414 GDPD2Q9HCC8 539 aa11.2□□□□□ -0.62
CCDC58-204ENST00000479414 RAD21O60216 631 aa11.19□□□□□ -0.62
CCDC58-204ENST00000479414 SLC19A1P41440 591 aa11.19□□□□□ -0.62
CCDC58-204ENST00000479414 NBPF14Q5TI25 921 aa11.19□□□□□ -0.62
CCDC58-204ENST00000479414 A6NJR5 290 aa11.18□□□□□ -0.62
CCDC58-204ENST00000479414 C14orf37Q86TY3 774 aa11.18□□□□□ -0.62
CCDC58-204ENST00000479414 CD2BP2O95400 341 aaKnown RBP11.17□□□□□ -0.62
CCDC58-204ENST00000479414 PDXDC2PQ6P474 469 aa11.17□□□□□ -0.62
CCDC58-204ENST00000479414 BAP1Q92560 729 aa11.17□□□□□ -0.62
CCDC58-204ENST00000479414 CLUAP1Q96AJ1 413 aa11.17□□□□□ -0.62
CCDC58-204ENST00000479414 V9GY48 417 aaPredicted RBP11.17□□□□□ -0.62
CCDC58-204ENST00000479414 WNT7BP56706 349 aa11.16□□□□□ -0.62
CCDC58-204ENST00000479414 ZNF511Q8NB15 262 aa11.16□□□□□ -0.62
CCDC58-204ENST00000479414 PRKD2Q9BZL6 878 aa11.16□□□□□ -0.62
CCDC58-204ENST00000479414 RGS20O76081 388 aa11.15□□□□□ -0.62
CCDC58-204ENST00000479414 ABL2P42684 1182 aa11.15□□□□□ -0.62
CCDC58-204ENST00000479414 SH3BP2P78314 561 aa11.15□□□□□ -0.62
CCDC58-204ENST00000479414 IRF5Q13568 498 aa11.15□□□□□ -0.62
CCDC58-204ENST00000479414 LINC01559Q495D7 138 aa11.15□□□□□ -0.62
CCDC58-204ENST00000479414 SPRYD7Q5W111 196 aa11.15□□□□□ -0.62
CCDC58-204ENST00000479414 GPSM3Q9Y4H4 160 aa11.15□□□□□ -0.62
CCDC58-204ENST00000479414 SH3BP5LQ7L8J4 393 aa11.14□□□□□ -0.63
CCDC58-204ENST00000479414 ZMYND15Q9H091 742 aa11.14□□□□□ -0.63
CCDC58-204ENST00000479414 SKOR1P84550 965 aa11.13□□□□□ -0.63
CCDC58-204ENST00000479414 SH3RF1Q7Z6J0 888 aa11.12□□□□□ -0.63
CCDC58-204ENST00000479414 FNBP4Q8N3X1 1017 aaPredicted RBP11.12□□□□□ -0.63
CCDC58-204ENST00000479414 PTK2Q05397 1052 aa11.11□□□□□ -0.63
CCDC58-204ENST00000479414 PROSER2Q86WR7 435 aaPredicted RBP11.11□□□□□ -0.63
CCDC58-204ENST00000479414 FOXJ1Q92949 421 aa11.11□□□□□ -0.63
CCDC58-204ENST00000479414 ZBBXA8MT70 800 aa11.1□□□□□ -0.63
CCDC58-204ENST00000479414 ZNF598Q86UK7 904 aaKnown RBP11.1□□□□□ -0.63
CCDC58-204ENST00000479414 BPHLQ86WA6 291 aaPredicted RBP11.1□□□□□ -0.63
CCDC58-204ENST00000479414 WWC1Q8IX03 1113 aa11.1□□□□□ -0.63
CCDC58-204ENST00000479414 OCSTAMPQ9BR26 566 aa11.1□□□□□ -0.63
CCDC58-204ENST00000479414 FBXO45P0C2W1 286 aa11.09□□□□□ -0.63
CCDC58-204ENST00000479414 NR1H3Q13133 447 aa11.09□□□□□ -0.63
CCDC58-204ENST00000479414 WASHC4Q2M389 1173 aa11.09□□□□□ -0.63
CCDC58-204ENST00000479414 ARHGAP9Q9BRR9 750 aa11.09□□□□□ -0.63
CCDC58-204ENST00000479414 C4orf48Q5BLP8 95 aa11.08□□□□□ -0.64
CCDC58-204ENST00000479414 ZNF697Q5TEC3 545 aa11.08□□□□□ -0.64
CCDC58-204ENST00000479414 C1QTNF2Q9BXJ5 285 aa11.08□□□□□ -0.64
CCDC58-204ENST00000479414 WNT7AO00755 349 aa11.07□□□□□ -0.64
CCDC58-204ENST00000479414 RC3H1Q5TC82 1133 aaKnown RBP11.07□□□□□ -0.64
CCDC58-204ENST00000479414 AGERQ15109 404 aa11.06□□□□□ -0.64
CCDC58-204ENST00000479414 TRAK2O60296 914 aa11.05□□□□□ -0.64
CCDC58-204ENST00000479414 VARSP26640 1264 aaKnown RBP11.05□□□□□ -0.64
CCDC58-204ENST00000479414 MAGEB6P1A0A0J9YX57 407 aa11.04□□□□□ -0.64
CCDC58-204ENST00000479414 VAC14Q08AM6 782 aa11.04□□□□□ -0.64
CCDC58-204ENST00000479414 ERFEQ4G0M1 354 aa11.04□□□□□ -0.64
CCDC58-204ENST00000479414 ZBTB33Q86T24 672 aa11.04□□□□□ -0.64
CCDC58-204ENST00000479414 EHBP1Q8NDI1 1231 aa11.04□□□□□ -0.64
CCDC58-204ENST00000479414 ADAM32Q8TC27 787 aa11.04□□□□□ -0.64
CCDC58-204ENST00000479414 TRMT44Q8IYL2 757 aaKnown RBP11.03□□□□□ -0.64
CCDC58-204ENST00000479414 FAM174AQ8TBP5 190 aa11.03□□□□□ -0.64
CCDC58-204ENST00000479414 CARD14Q9BXL6 1004 aa11.03□□□□□ -0.64
CCDC58-204ENST00000479414 PKD2L1Q9P0L9 805 aa11.03□□□□□ -0.64
CCDC58-204ENST00000479414 ZNF330Q9Y3S2 320 aaPredicted RBP11.03□□□□□ -0.64
CCDC58-204ENST00000479414 SIAH2O43255 324 aa11.01□□□□□ -0.65
CCDC58-204ENST00000479414 GDF9O60383 454 aa11.01□□□□□ -0.65
CCDC58-204ENST00000479414 MRGPRX2Q96LB1 330 aa11.01□□□□□ -0.65
CCDC58-204ENST00000479414 SOX11P35716 441 aa11□□□□□ -0.65
CCDC58-204ENST00000479414 EIF4G2P78344 907 aaKnown RBP eCLIP11□□□□□ -0.65
CCDC58-204ENST00000479414 FOXC1Q12948 553 aa11□□□□□ -0.65
CCDC58-204ENST00000479414 MPNDQ8N594 471 aa11□□□□□ -0.65
CCDC58-204ENST00000479414 ZNF592Q92610 1267 aa11□□□□□ -0.65
CCDC58-204ENST00000479414 POM121CA8CG34 1229 aa10.99□□□□□ -0.65
CCDC58-204ENST00000479414 MCCD1P59942 119 aaPredicted RBP10.99□□□□□ -0.65
CCDC58-204ENST00000479414 TRIM67Q6ZTA4 783 aa10.99□□□□□ -0.65
CCDC58-204ENST00000479414 PRR20EP86478 221 aa10.98□□□□□ -0.65
CCDC58-204ENST00000479414 PRR20CP86479 221 aa10.98□□□□□ -0.65
CCDC58-204ENST00000479414 PRR20DP86480 221 aa10.98□□□□□ -0.65
CCDC58-204ENST00000479414 PRR20BP86481 221 aa10.98□□□□□ -0.65
CCDC58-204ENST00000479414 PRR20AP86496 221 aa10.98□□□□□ -0.65
CCDC58-204ENST00000479414 CDK15Q96Q40 435 aa10.98□□□□□ -0.65
CCDC58-204ENST00000479414 SLC10A4Q96EP9 437 aa10.97□□□□□ -0.65
CCDC58-204ENST00000479414 CDV3Q9UKY7 258 aaKnown RBP10.97□□□□□ -0.65
CCDC58-204ENST00000479414 MAP4K5Q9Y4K4 846 aa10.97□□□□□ -0.65
CCDC58-204ENST00000479414 PCDHB9Q9Y5E1 797 aa10.97□□□□□ -0.65
CCDC58-204ENST00000479414 DZIP3Q86Y13 1208 aaKnown RBP10.96□□□□□ -0.65
CCDC58-204ENST00000479414 ALG2Q9H553 416 aa10.96□□□□□ -0.65
CCDC58-204ENST00000479414 SNIP1Q8TAD8 396 aaKnown RBP10.94□□□□□ -0.66
CCDC58-204ENST00000479414 ADAMTS19Q8TE59 1207 aa10.94□□□□□ -0.66
CCDC58-204ENST00000479414 TOR4AQ9NXH8 423 aa10.94□□□□□ -0.66
CCDC58-204ENST00000479414 TLL2Q9Y6L7 1015 aa10.94□□□□□ -0.66
CCDC58-204ENST00000479414 TNFRSF10AO00220 468 aa10.93□□□□□ -0.66
CCDC58-204ENST00000479414 SEMA3FQ13275 785 aa10.93□□□□□ -0.66
CCDC58-204ENST00000479414 ZNF777Q9ULD5 760 aaPredicted RBP10.93□□□□□ -0.66
CCDC58-204ENST00000479414 NBPF20Q3BBV1 942 aa10.92□□□□□ -0.66
CCDC58-204ENST00000479414 CYP4X1Q8N118 509 aa10.92□□□□□ -0.66
CCDC58-204ENST00000479414 HDGFL1Q5TGJ6 251 aa10.91□□□□□ -0.66
CCDC58-204ENST00000479414 VASH1Q7L8A9 365 aaPredicted RBP10.91□□□□□ -0.66
CCDC58-204ENST00000479414 GLMNQ92990 594 aa10.91□□□□□ -0.66
CCDC58-204ENST00000479414 CEP126Q9P2H0 1117 aa10.91□□□□□ -0.66
CCDC58-204ENST00000479414 ESPNB1AK53 854 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms