RNA–Protein interactions for RNA: ENST00000479389.1

RIPK1-203, Transcript of receptor interacting serine/threonine kinase 1, humanhuman

TSL 3

Gene RIPK1, Length 1,481 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK1-203ENST00000479389 CRYBG1Q9Y4K1 1723 aa23.4■■□□□ 1.34
RIPK1-203ENST00000479389 RALGAPBQ86X10 1494 aa23.4■■□□□ 1.34
RIPK1-203ENST00000479389 CCDC61Q9Y6R9 512 aa23.39■■□□□ 1.34
RIPK1-203ENST00000479389 FAM83GA6ND36 823 aa23.37■■□□□ 1.33
RIPK1-203ENST00000479389 COL14A1Q05707 1796 aaKnown RBP23.37■■□□□ 1.33
RIPK1-203ENST00000479389 POLR3AO14802 1390 aaPredicted RBP23.36■■□□□ 1.33
RIPK1-203ENST00000479389 VPS72Q15906 364 aa23.36■■□□□ 1.33
RIPK1-203ENST00000479389 ACEP12821 1306 aa23.36■■□□□ 1.33
RIPK1-203ENST00000479389 SRPK2P78362 688 aaKnown RBP23.36■■□□□ 1.33
RIPK1-203ENST00000479389 NRAPQ86VF7 1730 aa23.35■■□□□ 1.33
RIPK1-203ENST00000479389 PLEKHG3A1L390 1219 aa23.35■■□□□ 1.33
RIPK1-203ENST00000479389 CCDC9Q9Y3X0 531 aaKnown RBP23.35■■□□□ 1.33
RIPK1-203ENST00000479389 BRWD3Q6RI45 1802 aa23.33■■□□□ 1.33
RIPK1-203ENST00000479389 ROCK2O75116 1388 aaKnown RBP23.33■■□□□ 1.33
RIPK1-203ENST00000479389 NBPF8Q3BBV2 869 aa23.33■■□□□ 1.33
RIPK1-203ENST00000479389 PHRF1Q9P1Y6 1649 aaKnown RBP23.32■■□□□ 1.32
RIPK1-203ENST00000479389 PPIP5K1Q6PFW1 1433 aa23.32■■□□□ 1.32
RIPK1-203ENST00000479389 CABP2Q9NPB3 220 aa23.31■■□□□ 1.32
RIPK1-203ENST00000479389 BTG4Q9NY30 223 aa23.31■■□□□ 1.32
RIPK1-203ENST00000479389 EP400Q96L91 3159 aa23.31■■□□□ 1.32
RIPK1-203ENST00000479389 PRDM11Q9NQV5 511 aa23.29■■□□□ 1.32
RIPK1-203ENST00000479389 NUTM2GQ5VZR2 741 aa23.28■■□□□ 1.32
RIPK1-203ENST00000479389 SEPT12Q8IYM1 358 aa23.27■■□□□ 1.32
RIPK1-203ENST00000479389 EVC2Q86UK5 1308 aa23.27■■□□□ 1.31
RIPK1-203ENST00000479389 KIAA0232Q92628 1395 aa23.25■■□□□ 1.31
RIPK1-203ENST00000479389 ONECUT3O60422 494 aaPredicted RBP23.25■■□□□ 1.31
RIPK1-203ENST00000479389 ABTB2Q8N961 1025 aa23.25■■□□□ 1.31
RIPK1-203ENST00000479389 CCDC125Q86Z20 511 aa23.24■■□□□ 1.31
RIPK1-203ENST00000479389 TONSLQ96HA7 1378 aa23.23■■□□□ 1.31
RIPK1-203ENST00000479389 CABP1Q9NZU7 370 aa23.23■■□□□ 1.31
RIPK1-203ENST00000479389 NRKQ7Z2Y5 1582 aa23.23■■□□□ 1.31
RIPK1-203ENST00000479389 BRD4O60885 1362 aaPredicted RBP23.22■■□□□ 1.31
RIPK1-203ENST00000479389 A0A0G2JS52 829 aa23.22■■□□□ 1.31
RIPK1-203ENST00000479389 ZC3H6P61129 1189 aaKnown RBP23.22■■□□□ 1.31
RIPK1-203ENST00000479389 MYT1Q01538 1121 aa23.22■■□□□ 1.31
RIPK1-203ENST00000479389 CHRNA2Q15822 529 aa23.21■■□□□ 1.31
RIPK1-203ENST00000479389 FAM98CQ17RN3 349 aaKnown RBP23.2■■□□□ 1.3
RIPK1-203ENST00000479389 SPATA31A5Q5VU36 1347 aa23.2■■□□□ 1.3
RIPK1-203ENST00000479389 SPATA31A7Q8IWB4 1347 aa23.2■■□□□ 1.3
RIPK1-203ENST00000479389 USP6P35125 1406 aa23.19■■□□□ 1.3
RIPK1-203ENST00000479389 KRT27Q7Z3Y8 459 aa23.19■■□□□ 1.3
RIPK1-203ENST00000479389 NLRP13Q86W25 1043 aa23.19■■□□□ 1.3
RIPK1-203ENST00000479389 USP19O94966 1318 aa23.19■■□□□ 1.3
RIPK1-203ENST00000479389 CARD11Q9BXL7 1154 aa23.17■■□□□ 1.3
RIPK1-203ENST00000479389 BLMP54132 1417 aaPredicted RBP23.17■■□□□ 1.3
RIPK1-203ENST00000479389 AKAP12Q02952 1782 aa23.17■■□□□ 1.3
RIPK1-203ENST00000479389 STRN4Q9NRL3 753 aa23.16■■□□□ 1.3
RIPK1-203ENST00000479389 CPDO75976 1380 aa23.15■■□□□ 1.3
RIPK1-203ENST00000479389 THSD7AQ9UPZ6 1657 aa23.14■■□□□ 1.3
RIPK1-203ENST00000479389 GCP02774 474 aa23.14■■□□□ 1.29
RIPK1-203ENST00000479389 PIK3C2AO00443 1686 aa23.13■■□□□ 1.29
RIPK1-203ENST00000479389 LMO7Q8WWI1 1683 aa23.13■■□□□ 1.29
RIPK1-203ENST00000479389 SBNO2Q9Y2G9 1366 aa23.13■■□□□ 1.29
RIPK1-203ENST00000479389 SPATA31A1Q5TZJ5 1347 aa23.13■■□□□ 1.29
RIPK1-203ENST00000479389 EVA1CP58658 441 aa23.12■■□□□ 1.29
RIPK1-203ENST00000479389 NLRP6P59044 892 aa23.12■■□□□ 1.29
RIPK1-203ENST00000479389 SF3B2Q13435 895 aaKnown RBP23.12■■□□□ 1.29
RIPK1-203ENST00000479389 ZNF692Q9BU19 519 aaPredicted RBP23.12■■□□□ 1.29
RIPK1-203ENST00000479389 CAMTA1Q9Y6Y1 1673 aa23.12■■□□□ 1.29
RIPK1-203ENST00000479389 SSH2Q76I76 1423 aa23.12■■□□□ 1.29
RIPK1-203ENST00000479389 SLIT3O75094 1523 aa23.1■■□□□ 1.29
RIPK1-203ENST00000479389 ZRANB1Q9UGI0 708 aa23.08■■□□□ 1.29
RIPK1-203ENST00000479389 CPSF1Q10570 1443 aaKnown RBP23.07■■□□□ 1.28
RIPK1-203ENST00000479389 MON2Q7Z3U7 1717 aa23.07■■□□□ 1.28
RIPK1-203ENST00000479389 USP35Q9P2H5 1018 aa23.07■■□□□ 1.28
RIPK1-203ENST00000479389 TTC21BQ7Z4L5 1316 aa23.07■■□□□ 1.28
RIPK1-203ENST00000479389 KTN1Q86UP2 1357 aaKnown RBP23.06■■□□□ 1.28
RIPK1-203ENST00000479389 ZBTB7CA1YPR0 619 aa23.05■■□□□ 1.28
RIPK1-203ENST00000479389 LARP1Q6PKG0 1096 aaKnown RBP23.05■■□□□ 1.28
RIPK1-203ENST00000479389 DEFB132Q7Z7B7 95 aa23.05■■□□□ 1.28
RIPK1-203ENST00000479389 RGPD1P0DJD0 1748 aa23.05■■□□□ 1.28
RIPK1-203ENST00000479389 TTC21AQ8NDW8 1320 aa23.05■■□□□ 1.28
RIPK1-203ENST00000479389 PCGF6Q9BYE7 350 aa23.05■■□□□ 1.28
RIPK1-203ENST00000479389 COL5A2P05997 1499 aaPredicted RBP23.04■■□□□ 1.28
RIPK1-203ENST00000479389 FAM182BQ5T319 152 aa23.04■■□□□ 1.28
RIPK1-203ENST00000479389 AATKQ6ZMQ8 1374 aa23.03■■□□□ 1.28
RIPK1-203ENST00000479389 BARGINQ6ZT62 677 aa23.03■■□□□ 1.28
RIPK1-203ENST00000479389 TCP11L2Q8N4U5 519 aa23.02■■□□□ 1.28
RIPK1-203ENST00000479389 COL18A1P39060 1754 aa23.01■■□□□ 1.27
RIPK1-203ENST00000479389 BAG6P46379 1132 aa23■■□□□ 1.27
RIPK1-203ENST00000479389 KCNH5Q8NCM2 988 aa23■■□□□ 1.27
RIPK1-203ENST00000479389 TMC1Q8TDI8 760 aa23■■□□□ 1.27
RIPK1-203ENST00000479389 THRAP3Q9Y2W1 955 aaKnown RBP22.99■■□□□ 1.27
RIPK1-203ENST00000479389 RGPD5Q99666 1765 aa22.99■■□□□ 1.27
RIPK1-203ENST00000479389 CRB1P82279 1406 aa22.99■■□□□ 1.27
RIPK1-203ENST00000479389 CD163L1Q9NR16 1453 aa22.98■■□□□ 1.27
RIPK1-203ENST00000479389 TNS1Q9HBL0 1735 aaKnown RBP22.98■■□□□ 1.27
RIPK1-203ENST00000479389 PARP4Q9UKK3 1724 aaKnown RBP22.97■■□□□ 1.27
RIPK1-203ENST00000479389 SOX12O15370 315 aa22.97■■□□□ 1.27
RIPK1-203ENST00000479389 PDE3BQ13370 1112 aa22.97■■□□□ 1.27
RIPK1-203ENST00000479389 FAM196AQ6ZSG2 479 aa22.97■■□□□ 1.27
RIPK1-203ENST00000479389 HDGFL2Q7Z4V5 671 aaPredicted RBP22.97■■□□□ 1.27
RIPK1-203ENST00000479389 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.97■■□□□ 1.272e-6■■□□□ 13.1
RIPK1-203ENST00000479389 PUS7Q96PZ0 661 aaKnown RBP22.96■■□□□ 1.27
RIPK1-203ENST00000479389 SLC12A5Q9H2X9 1139 aa22.96■■□□□ 1.27
RIPK1-203ENST00000479389 USP54Q70EL1 1684 aa22.96■■□□□ 1.27
RIPK1-203ENST00000479389 NFAT5O94916 1531 aa22.95■■□□□ 1.26
RIPK1-203ENST00000479389 ST20-MTHFSA0A0A6YYL1 179 aa22.95■■□□□ 1.26
RIPK1-203ENST00000479389 ARHGEF25Q86VW2 580 aa22.95■■□□□ 1.26
RIPK1-203ENST00000479389 TERF2IPQ9NYB0 399 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms