RNA–Protein interactions for RNA: ENST00000479309.6

SPC25-204, Transcript of SPC25, NDC80 kinetochore complex component, humanhuman

TSL 5

Gene SPC25, Length 510 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC25-204ENST00000479309 TTC24A2A3L6 582 aaPredicted RBP8.19□□□□□ -1.1
SPC25-204ENST00000479309 NUTM2BA6NNL0 878 aaPredicted RBP8.19□□□□□ -1.1
SPC25-204ENST00000479309 NUTM2EB1AL46 878 aaPredicted RBP8.19□□□□□ -1.1
SPC25-204ENST00000479309 CSPP1Q1MSJ5 1256 aa8.19□□□□□ -1.1
SPC25-204ENST00000479309 RTL5Q5HYW3 569 aaPredicted RBP8.19□□□□□ -1.1
SPC25-204ENST00000479309 NUTM2DQ5VT03 806 aaPredicted RBP8.19□□□□□ -1.1
SPC25-204ENST00000479309 PPP2R2DQ66LE6 453 aa8.19□□□□□ -1.1
SPC25-204ENST00000479309 TREML4Q6UXN2 200 aa8.19□□□□□ -1.1
SPC25-204ENST00000479309 NUTM2AQ8IVF1 878 aaPredicted RBP8.19□□□□□ -1.1
SPC25-204ENST00000479309 MPNDQ8N594 471 aa8.19□□□□□ -1.1
SPC25-204ENST00000479309 AAASQ9NRG9 546 aa8.19□□□□□ -1.1
SPC25-204ENST00000479309 POLR3EQ9NVU0 708 aa8.19□□□□□ -1.1
SPC25-204ENST00000479309 PER1O15534 1290 aaPredicted RBP8.18□□□□□ -1.1
SPC25-204ENST00000479309 GOPCQ9HD26 462 aa8.18□□□□□ -1.1
SPC25-204ENST00000479309 ZNF511Q8NB15 262 aa8.17□□□□□ -1.1
SPC25-204ENST00000479309 HELBQ8NG08 1087 aaPredicted RBP8.17□□□□□ -1.1
SPC25-204ENST00000479309 BAP1Q92560 729 aa8.17□□□□□ -1.1
SPC25-204ENST00000479309 VARSP26640 1264 aaKnown RBP8.16□□□□□ -1.1
SPC25-204ENST00000479309 CTHP32929 405 aa8.16□□□□□ -1.1
SPC25-204ENST00000479309 EHBP1Q8NDI1 1231 aa8.16□□□□□ -1.1
SPC25-204ENST00000479309 J3QL48 77 aa8.15□□□□□ -1.1
SPC25-204ENST00000479309 MAP10Q9P2G4 905 aa8.15□□□□□ -1.1
SPC25-204ENST00000479309 AXIN1O15169 862 aa8.14□□□□□ -1.11
SPC25-204ENST00000479309 ARMC2Q8NEN0 867 aa8.14□□□□□ -1.11
SPC25-204ENST00000479309 ST8SIA5O15466 376 aa8.13□□□□□ -1.11
SPC25-204ENST00000479309 LINC01559Q495D7 138 aa8.13□□□□□ -1.11
SPC25-204ENST00000479309 PROCA1Q8NCQ7 364 aaPredicted RBP8.13□□□□□ -1.11
SPC25-204ENST00000479309 FBXO31Q5XUX0 539 aaPredicted RBP8.12□□□□□ -1.11
SPC25-204ENST00000479309 ALDH1A1P00352 501 aa8.11□□□□□ -1.11
SPC25-204ENST00000479309 CTDSPL2Q05D32 466 aa8.11□□□□□ -1.11
SPC25-204ENST00000479309 TSC1Q92574 1164 aa8.11□□□□□ -1.11
SPC25-204ENST00000479309 HPS1Q92902 700 aa8.11□□□□□ -1.11
SPC25-204ENST00000479309 GPKOWQ92917 476 aaPredicted RBP eCLIP8.11□□□□□ -1.11
SPC25-204ENST00000479309 BRPF1P55201 1214 aaPredicted RBP8.1□□□□□ -1.11
SPC25-204ENST00000479309 NEUROD2Q15784 382 aa8.1□□□□□ -1.11
SPC25-204ENST00000479309 SH3RF1Q7Z6J0 888 aa8.1□□□□□ -1.11
SPC25-204ENST00000479309 CDK15Q96Q40 435 aa8.1□□□□□ -1.11
SPC25-204ENST00000479309 FAM174AQ8TBP5 190 aa8.09□□□□□ -1.11
SPC25-204ENST00000479309 FOXJ1Q92949 421 aa8.09□□□□□ -1.11
SPC25-204ENST00000479309 DACH1Q9UI36 760 aa8.09□□□□□ -1.11
SPC25-204ENST00000479309 NBPF14Q5TI25 921 aa8.08□□□□□ -1.12
SPC25-204ENST00000479309 BPHLQ86WA6 291 aaPredicted RBP8.08□□□□□ -1.12
SPC25-204ENST00000479309 TPRNQ4KMQ1 711 aa8.07□□□□□ -1.12
SPC25-204ENST00000479309 C4orf48Q5BLP8 95 aa8.07□□□□□ -1.12
SPC25-204ENST00000479309 SH3BP5LQ7L8J4 393 aa8.07□□□□□ -1.12
SPC25-204ENST00000479309 C1QTNF2Q9BXJ5 285 aa8.07□□□□□ -1.12
SPC25-204ENST00000479309 STK17AQ9UEE5 414 aa8.07□□□□□ -1.12
SPC25-204ENST00000479309 WASF2Q9Y6W5 498 aa8.06□□□□□ -1.12
SPC25-204ENST00000479309 ZC3H4Q9UPT8 1303 aaKnown RBP8.05□□□□□ -1.12
SPC25-204ENST00000479309 RFC5P40937 340 aa8.05□□□□□ -1.12
SPC25-204ENST00000479309 PDXDC2PQ6P474 469 aa8.05□□□□□ -1.12
SPC25-204ENST00000479309 TRMT44Q8IYL2 757 aaKnown RBP8.05□□□□□ -1.12
SPC25-204ENST00000479309 LRRN4Q8WUT4 740 aa8.05□□□□□ -1.12
SPC25-204ENST00000479309 PCMTD1Q96MG8 357 aaPredicted RBP8.05□□□□□ -1.12
SPC25-204ENST00000479309 ATP13A2Q9NQ11 1180 aa8.05□□□□□ -1.12
SPC25-204ENST00000479309 TLL2Q9Y6L7 1015 aa8.05□□□□□ -1.12
SPC25-204ENST00000479309 ADH1CP00326 375 aa8.04□□□□□ -1.12
SPC25-204ENST00000479309 GMPR2Q9P2T1 348 aaKnown RBP8.04□□□□□ -1.12
SPC25-204ENST00000479309 MAP4K5Q9Y4K4 846 aa8.04□□□□□ -1.12
SPC25-204ENST00000479309 TMEM259Q4ZIN3 620 aa8.03□□□□□ -1.12
SPC25-204ENST00000479309 IL27Q8NEV9 243 aa8.03□□□□□ -1.12
SPC25-204ENST00000479309 KLF16Q9BXK1 252 aaPredicted RBP8.03□□□□□ -1.12
SPC25-204ENST00000479309 FKBPLQ9UIM3 349 aa8.03□□□□□ -1.12
SPC25-204ENST00000479309 AP1G2O75843 785 aa8.02□□□□□ -1.13
SPC25-204ENST00000479309 GRM5P41594 1212 aa8.02□□□□□ -1.13
SPC25-204ENST00000479309 NR5A1Q13285 461 aa8.02□□□□□ -1.13
SPC25-204ENST00000479309 NNTQ13423 1086 aa8.02□□□□□ -1.13
SPC25-204ENST00000479309 SENP2Q9HC62 589 aa8.02□□□□□ -1.13
SPC25-204ENST00000479309 CAPN5O15484 640 aaPredicted RBP8.01□□□□□ -1.13
SPC25-204ENST00000479309 USP17L8P0C7I0 530 aa8.01□□□□□ -1.13
SPC25-204ENST00000479309 AGERQ15109 404 aa8.01□□□□□ -1.13
SPC25-204ENST00000479309 NR6A1Q15406 480 aa8.01□□□□□ -1.13
SPC25-204ENST00000479309 TRIM47Q96LD4 638 aa8.01□□□□□ -1.13
SPC25-204ENST00000479309 GPSM3Q9Y4H4 160 aa8.01□□□□□ -1.13
SPC25-204ENST00000479309 C11orf95C9JLR9 678 aaPredicted RBP8□□□□□ -1.13
SPC25-204ENST00000479309 KIFC2Q96AC6 838 aa8□□□□□ -1.13
SPC25-204ENST00000479309 ATP1B4Q9UN42 357 aaPredicted RBP8□□□□□ -1.13
SPC25-204ENST00000479309 TIMP2P16035 220 aa7.99□□□□□ -1.13
SPC25-204ENST00000479309 ERFEQ4G0M1 354 aa7.99□□□□□ -1.13
SPC25-204ENST00000479309 SOCS7O14512 581 aa7.98□□□□□ -1.13
SPC25-204ENST00000479309 TRIM46Q7Z4K8 759 aa7.98□□□□□ -1.13
SPC25-204ENST00000479309 PNMA1Q8ND90 353 aa7.98□□□□□ -1.13
SPC25-204ENST00000479309 HMX1Q9NP08 348 aaPredicted RBP7.98□□□□□ -1.13
SPC25-204ENST00000479309 NR3C2P08235 984 aa7.97□□□□□ -1.13
SPC25-204ENST00000479309 EPS8L1Q8TE68 723 aa7.97□□□□□ -1.13
SPC25-204ENST00000479309 OCSTAMPQ9BR26 566 aa7.97□□□□□ -1.13
SPC25-204ENST00000479309 CDV3Q9UKY7 258 aaKnown RBP7.97□□□□□ -1.13
SPC25-204ENST00000479309 PTK2Q05397 1052 aa7.96□□□□□ -1.14
SPC25-204ENST00000479309 ARID5BQ14865 1188 aa7.96□□□□□ -1.14
SPC25-204ENST00000479309 BANK1Q8NDB2 785 aa7.96□□□□□ -1.14
SPC25-204ENST00000479309 ARHGAP9Q9BRR9 750 aa7.96□□□□□ -1.14
SPC25-204ENST00000479309 TRIM34Q9BYJ4 488 aa7.96□□□□□ -1.14
SPC25-204ENST00000479309 MAGEB6P1A0A0J9YX57 407 aa7.95□□□□□ -1.14
SPC25-204ENST00000479309 WIPF1O43516 503 aa7.95□□□□□ -1.14
SPC25-204ENST00000479309 WFS1O76024 890 aa7.95□□□□□ -1.14
SPC25-204ENST00000479309 SNRPBP14678 240 aaKnown RBP7.95□□□□□ -1.14
SPC25-204ENST00000479309 WDR4P57081 412 aaKnown RBP7.95□□□□□ -1.14
SPC25-204ENST00000479309 SUZ12Q15022 739 aaKnown RBP7.94□□□□□ -1.14
SPC25-204ENST00000479309 VASH1Q7L8A9 365 aaPredicted RBP7.94□□□□□ -1.14
SPC25-204ENST00000479309 GJD4Q96KN9 370 aaPredicted RBP7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms