RNA–Protein interactions for RNA: ENST00000479307.5

RFC4-212, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,043 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-212ENST00000479307 CTHP32929 405 aa9.47□□□□□ -0.89
RFC4-212ENST00000479307 HOMEZQ8IX15 550 aa9.47□□□□□ -0.89
RFC4-212ENST00000479307 ARMC2Q8NEN0 867 aa9.47□□□□□ -0.89
RFC4-212ENST00000479307 GPKOWQ92917 476 aaPredicted RBP eCLIP9.47□□□□□ -0.897e-6■■■■■ 33.4
RFC4-212ENST00000479307 PRDM9Q9NQV7 894 aa9.47□□□□□ -0.89
RFC4-212ENST00000479307 FKBPLQ9UIM3 349 aa9.47□□□□□ -0.89
RFC4-212ENST00000479307 SOX11P35716 441 aa9.46□□□□□ -0.9
RFC4-212ENST00000479307 KCNH2Q12809 1159 aa9.46□□□□□ -0.9
RFC4-212ENST00000479307 ZNF516Q92618 1163 aa9.46□□□□□ -0.9
RFC4-212ENST00000479307 MAP10Q9P2G4 905 aa9.46□□□□□ -0.9
RFC4-212ENST00000479307 GLMNQ92990 594 aa9.45□□□□□ -0.9
RFC4-212ENST00000479307 CALR3Q96L12 384 aaKnown RBP9.45□□□□□ -0.9
RFC4-212ENST00000479307 ARID3AQ99856 593 aa9.45□□□□□ -0.9
RFC4-212ENST00000479307 POM121CA8CG34 1229 aa9.44□□□□□ -0.9
RFC4-212ENST00000479307 ITGBL1O95965 494 aaPredicted RBP9.44□□□□□ -0.9
RFC4-212ENST00000479307 VAC14Q08AM6 782 aa9.44□□□□□ -0.9
RFC4-212ENST00000479307 NBPF14Q5TI25 921 aa9.43□□□□□ -0.9
RFC4-212ENST00000479307 GPSM3Q9Y4H4 160 aa9.43□□□□□ -0.9
RFC4-212ENST00000479307 ZBBXA8MT70 800 aa9.42□□□□□ -0.9
RFC4-212ENST00000479307 KCNC4Q03721 635 aa9.42□□□□□ -0.9
RFC4-212ENST00000479307 NR1H3Q13133 447 aa9.42□□□□□ -0.9
RFC4-212ENST00000479307 EIF4G2P78344 907 aaKnown RBP eCLIP9.41□□□□□ -0.9
RFC4-212ENST00000479307 PDXDC2PQ6P474 469 aa9.41□□□□□ -0.9
RFC4-212ENST00000479307 HDGFL1Q5TGJ6 251 aa9.4□□□□□ -0.9
RFC4-212ENST00000479307 ZNF592Q92610 1267 aa9.4□□□□□ -0.9
RFC4-212ENST00000479307 S1PR4O95977 384 aa9.39□□□□□ -0.91
RFC4-212ENST00000479307 PTK2Q05397 1052 aa9.39□□□□□ -0.91
RFC4-212ENST00000479307 CCDC24Q8N4L8 307 aa9.39□□□□□ -0.91
RFC4-212ENST00000479307 NKX2-3Q8TAU0 364 aa9.39□□□□□ -0.91
RFC4-212ENST00000479307 UNC93B1Q9H1C4 597 aa9.39□□□□□ -0.91
RFC4-212ENST00000479307 ALG2Q9H553 416 aa9.39□□□□□ -0.91
RFC4-212ENST00000479307 FBXO45P0C2W1 286 aa9.38□□□□□ -0.91
RFC4-212ENST00000479307 SEMA3FQ13275 785 aa9.38□□□□□ -0.91
RFC4-212ENST00000479307 ADAMTS19Q8TE59 1207 aa9.38□□□□□ -0.91
RFC4-212ENST00000479307 IRX2Q9BZI1 471 aaPredicted RBP9.38□□□□□ -0.91
RFC4-212ENST00000479307 GGCXP38435 758 aa9.37□□□□□ -0.91
RFC4-212ENST00000479307 FCF1Q9Y324 198 aaKnown RBP9.37□□□□□ -0.91
RFC4-212ENST00000479307 MCCD1P59942 119 aaPredicted RBP9.35□□□□□ -0.91
RFC4-212ENST00000479307 PTCRAQ6ISU1 281 aaPredicted RBP9.34□□□□□ -0.91
RFC4-212ENST00000479307 ANKLE1Q8NAG6 615 aa9.33□□□□□ -0.92
RFC4-212ENST00000479307 ARHGAP9Q9BRR9 750 aa9.33□□□□□ -0.92
RFC4-212ENST00000479307 A0A0G2JS52 829 aa9.32□□□□□ -0.92
RFC4-212ENST00000479307 PPP1R15AO75807 674 aaPredicted RBP9.32□□□□□ -0.92
RFC4-212ENST00000479307 RGS20O76081 388 aa9.32□□□□□ -0.92
RFC4-212ENST00000479307 SH3BP5LQ7L8J4 393 aa9.32□□□□□ -0.92
RFC4-212ENST00000479307 SH3RF1Q7Z6J0 888 aa9.31□□□□□ -0.92
RFC4-212ENST00000479307 BPHLQ86WA6 291 aaPredicted RBP9.31□□□□□ -0.92
RFC4-212ENST00000479307 PPP1R12CQ9BZL4 782 aa9.31□□□□□ -0.92
RFC4-212ENST00000479307 RNF223E7ERA6 249 aa9.3□□□□□ -0.92
RFC4-212ENST00000479307 ZBTB24O43167 697 aaPredicted RBP9.3□□□□□ -0.92
RFC4-212ENST00000479307 IFFO2Q5TF58 517 aa9.3□□□□□ -0.92
RFC4-212ENST00000479307 ZBTB33Q86T24 672 aa9.3□□□□□ -0.92
RFC4-212ENST00000479307 ZNF511Q8NB15 262 aa9.3□□□□□ -0.92
RFC4-212ENST00000479307 OCSTAMPQ9BR26 566 aa9.3□□□□□ -0.92
RFC4-212ENST00000479307 ADAM32Q8TC27 787 aa9.29□□□□□ -0.92
RFC4-212ENST00000479307 BAP1Q92560 729 aa9.29□□□□□ -0.92
RFC4-212ENST00000479307 UCN2Q96RP3 112 aa9.29□□□□□ -0.92
RFC4-212ENST00000479307 PALM3A6NDB9 673 aaPredicted RBP9.28□□□□□ -0.92
RFC4-212ENST00000479307 CFAP70Q5T0N1 1121 aa9.28□□□□□ -0.92
RFC4-212ENST00000479307 NFATC2IPQ8NCF5 419 aa9.28□□□□□ -0.92
RFC4-212ENST00000479307 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.28□□□□□ -0.92
RFC4-212ENST00000479307 CCDC180Q9P1Z9 1646 aa9.27□□□□□ -0.92
RFC4-212ENST00000479307 PPEF1O14829 653 aaPredicted RBP9.27□□□□□ -0.93
RFC4-212ENST00000479307 AGERQ15109 404 aa9.27□□□□□ -0.93
RFC4-212ENST00000479307 PPP1R18Q6NYC8 613 aa9.27□□□□□ -0.93
RFC4-212ENST00000479307 PCDHB9Q9Y5E1 797 aa9.27□□□□□ -0.93
RFC4-212ENST00000479307 RPIAP49247 311 aa9.26□□□□□ -0.93
RFC4-212ENST00000479307 TRIM32Q13049 653 aa9.26□□□□□ -0.93
RFC4-212ENST00000479307 LINC01559Q495D7 138 aa9.26□□□□□ -0.93
RFC4-212ENST00000479307 PBXIP1Q96AQ6 731 aa9.26□□□□□ -0.93
RFC4-212ENST00000479307 MAGEB6P1A0A0J9YX57 407 aa9.25□□□□□ -0.93
RFC4-212ENST00000479307 ATP9BO43861 1147 aa9.25□□□□□ -0.93
RFC4-212ENST00000479307 TFIP11Q9UBB9 837 aaKnown RBP9.25□□□□□ -0.93
RFC4-212ENST00000479307 WNT7BP56706 349 aa9.24□□□□□ -0.93
RFC4-212ENST00000479307 SH3BP2P78314 561 aa9.24□□□□□ -0.93
RFC4-212ENST00000479307 SLFNL1Q499Z3 407 aa9.24□□□□□ -0.93
RFC4-212ENST00000479307 ERFEQ4G0M1 354 aa9.24□□□□□ -0.93
RFC4-212ENST00000479307 DZIP3Q86Y13 1208 aaKnown RBP9.24□□□□□ -0.93
RFC4-212ENST00000479307 FOXJ1Q92949 421 aa9.24□□□□□ -0.93
RFC4-212ENST00000479307 C1QTNF2Q9BXJ5 285 aa9.24□□□□□ -0.93
RFC4-212ENST00000479307 CARD14Q9BXL6 1004 aa9.24□□□□□ -0.93
RFC4-212ENST00000479307 CEP126Q9P2H0 1117 aa9.24□□□□□ -0.93
RFC4-212ENST00000479307 CDV3Q9UKY7 258 aaKnown RBP9.24□□□□□ -0.93
RFC4-212ENST00000479307 MAFBQ9Y5Q3 323 aaPredicted RBP9.24□□□□□ -0.93
RFC4-212ENST00000479307 LMOD1P29536 600 aaPredicted RBP9.23□□□□□ -0.93
RFC4-212ENST00000479307 PLA2G2CQ5R387 149 aa9.23□□□□□ -0.93
RFC4-212ENST00000479307 TBC1D9Q6ZT07 1266 aa9.23□□□□□ -0.93
RFC4-212ENST00000479307 TRMT44Q8IYL2 757 aaKnown RBP9.23□□□□□ -0.93
RFC4-212ENST00000479307 SLC10A4Q96EP9 437 aa9.23□□□□□ -0.93
RFC4-212ENST00000479307 ACIN1Q9UKV3 1341 aaKnown RBP9.23□□□□□ -0.93
RFC4-212ENST00000479307 NBPF20Q3BBV1 942 aa9.22□□□□□ -0.93
RFC4-212ENST00000479307 C4orf48Q5BLP8 95 aa9.22□□□□□ -0.93
RFC4-212ENST00000479307 LZTS3O60299 673 aaPredicted RBP9.21□□□□□ -0.94
RFC4-212ENST00000479307 CD2BP2O95400 341 aaKnown RBP9.21□□□□□ -0.94
RFC4-212ENST00000479307 RFX1P22670 979 aa9.21□□□□□ -0.94
RFC4-212ENST00000479307 VARSP26640 1264 aaKnown RBP9.21□□□□□ -0.94
RFC4-212ENST00000479307 CCDC125Q86Z20 511 aa9.21□□□□□ -0.94
RFC4-212ENST00000479307 PLEKHM2Q8IWE5 1019 aa9.21□□□□□ -0.94
RFC4-212ENST00000479307 PIK3CDO00329 1044 aa9.2□□□□□ -0.94
RFC4-212ENST00000479307 SKIP12755 728 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms