RNA–Protein interactions for RNA: ENST00000479192.1

ZNF3-213, Transcript of zinc finger protein 3, humanhuman

TSL 2

Gene ZNF3, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF3-213ENST00000479192 CDK19Q9BWU1 502 aa16.08■□□□□ 0.16
ZNF3-213ENST00000479192 NBPF1Q3BBV0 1214 aa16.07■□□□□ 0.16
ZNF3-213ENST00000479192 AKAP12Q02952 1782 aa16.07■□□□□ 0.16
ZNF3-213ENST00000479192 VPS72Q15906 364 aa16.06■□□□□ 0.16
ZNF3-213ENST00000479192 CCDC9Q9Y3X0 531 aaKnown RBP16.06■□□□□ 0.16
ZNF3-213ENST00000479192 FAM83GA6ND36 823 aa16.05■□□□□ 0.16
ZNF3-213ENST00000479192 POLR3AO14802 1390 aaPredicted RBP16.04■□□□□ 0.16
ZNF3-213ENST00000479192 CENPJQ9HC77 1338 aaPredicted RBP16.04■□□□□ 0.16
ZNF3-213ENST00000479192 RGPD1P0DJD0 1748 aa16.04■□□□□ 0.16
ZNF3-213ENST00000479192 NRKQ7Z2Y5 1582 aa16.04■□□□□ 0.16
ZNF3-213ENST00000479192 CCDC125Q86Z20 511 aa16.03■□□□□ 0.16
ZNF3-213ENST00000479192 L3MBTL2Q969R5 705 aa16.03■□□□□ 0.16
ZNF3-213ENST00000479192 CCDC61Q9Y6R9 512 aa16.03■□□□□ 0.16
ZNF3-213ENST00000479192 ACEP12821 1306 aa16.02■□□□□ 0.16
ZNF3-213ENST00000479192 BTG4Q9NY30 223 aa16.02■□□□□ 0.16
ZNF3-213ENST00000479192 PPIP5K1Q6PFW1 1433 aa16.02■□□□□ 0.15
ZNF3-213ENST00000479192 THSD7AQ9UPZ6 1657 aa16.02■□□□□ 0.15
ZNF3-213ENST00000479192 SRPK2P78362 688 aaKnown RBP16.01■□□□□ 0.15
ZNF3-213ENST00000479192 SEPT12Q8IYM1 358 aa16.01■□□□□ 0.15
ZNF3-213ENST00000479192 SIN3AQ96ST3 1273 aa16.01■□□□□ 0.15
ZNF3-213ENST00000479192 RGPD5Q99666 1765 aa16■□□□□ 0.15
ZNF3-213ENST00000479192 PLEKHG3A1L390 1219 aa16■□□□□ 0.15
ZNF3-213ENST00000479192 NEUROD1Q13562 356 aa16■□□□□ 0.15
ZNF3-213ENST00000479192 ONECUT3O60422 494 aaPredicted RBP15.99■□□□□ 0.15
ZNF3-213ENST00000479192 NBPF8Q3BBV2 869 aa15.99■□□□□ 0.15
ZNF3-213ENST00000479192 PRDM11Q9NQV5 511 aa15.99■□□□□ 0.15
ZNF3-213ENST00000479192 BLMP54132 1417 aaPredicted RBP15.99■□□□□ 0.15
ZNF3-213ENST00000479192 LMO7Q8WWI1 1683 aa15.99■□□□□ 0.15
ZNF3-213ENST00000479192 A0A0G2JS52 829 aa15.98■□□□□ 0.15
ZNF3-213ENST00000479192 MYT1Q01538 1121 aa15.98■□□□□ 0.15
ZNF3-213ENST00000479192 PIK3C2AO00443 1686 aa15.98■□□□□ 0.15
ZNF3-213ENST00000479192 TNS1Q9HBL0 1735 aaKnown RBP15.97■□□□□ 0.15
ZNF3-213ENST00000479192 WNK3Q9BYP7 1800 aa15.97■□□□□ 0.15
ZNF3-213ENST00000479192 NUTM2GQ5VZR2 741 aa15.97■□□□□ 0.15
ZNF3-213ENST00000479192 CABP2Q9NPB3 220 aa15.97■□□□□ 0.15
ZNF3-213ENST00000479192 ROCK2O75116 1388 aaKnown RBP15.97■□□□□ 0.15
ZNF3-213ENST00000479192 KIAA0232Q92628 1395 aa15.97■□□□□ 0.15
ZNF3-213ENST00000479192 MON2Q7Z3U7 1717 aa15.97■□□□□ 0.15
ZNF3-213ENST00000479192 FAM98CQ17RN3 349 aaKnown RBP15.96■□□□□ 0.15
ZNF3-213ENST00000479192 KRT27Q7Z3Y8 459 aa15.96■□□□□ 0.15
ZNF3-213ENST00000479192 ABTB2Q8N961 1025 aa15.96■□□□□ 0.15
ZNF3-213ENST00000479192 SPATA31A5Q5VU36 1347 aa15.95■□□□□ 0.14
ZNF3-213ENST00000479192 SPATA31A7Q8IWB4 1347 aa15.95■□□□□ 0.14
ZNF3-213ENST00000479192 SF3B2Q13435 895 aaKnown RBP15.95■□□□□ 0.14
ZNF3-213ENST00000479192 BRD4O60885 1362 aaPredicted RBP15.95■□□□□ 0.14
ZNF3-213ENST00000479192 EVC2Q86UK5 1308 aa15.94■□□□□ 0.14
ZNF3-213ENST00000479192 ZC3H6P61129 1189 aaKnown RBP15.94■□□□□ 0.14
ZNF3-213ENST00000479192 CHRNA2Q15822 529 aa15.93■□□□□ 0.14
ZNF3-213ENST00000479192 ZRANB1Q9UGI0 708 aa15.93■□□□□ 0.14
ZNF3-213ENST00000479192 PARP4Q9UKK3 1724 aaKnown RBP15.93■□□□□ 0.14
ZNF3-213ENST00000479192 USP6P35125 1406 aa15.93■□□□□ 0.14
ZNF3-213ENST00000479192 COL18A1P39060 1754 aa15.92■□□□□ 0.14
ZNF3-213ENST00000479192 NLRP13Q86W25 1043 aa15.92■□□□□ 0.14
ZNF3-213ENST00000479192 CAMTA1Q9Y6Y1 1673 aa15.92■□□□□ 0.14
ZNF3-213ENST00000479192 USP19O94966 1318 aa15.92■□□□□ 0.14
ZNF3-213ENST00000479192 LTN1O94822 1766 aa15.91■□□□□ 0.14
ZNF3-213ENST00000479192 SLIT3O75094 1523 aa15.91■□□□□ 0.14
ZNF3-213ENST00000479192 STRN4Q9NRL3 753 aa15.91■□□□□ 0.14
ZNF3-213ENST00000479192 CABP1Q9NZU7 370 aa15.91■□□□□ 0.14
ZNF3-213ENST00000479192 SBF2Q86WG5 1849 aa15.91■□□□□ 0.14
ZNF3-213ENST00000479192 CPDO75976 1380 aa15.9■□□□□ 0.14
ZNF3-213ENST00000479192 SPATA31A1Q5TZJ5 1347 aa15.9■□□□□ 0.14
ZNF3-213ENST00000479192 USP54Q70EL1 1684 aa15.89■□□□□ 0.13
ZNF3-213ENST00000479192 SSH2Q76I76 1423 aa15.89■□□□□ 0.13
ZNF3-213ENST00000479192 EVA1CP58658 441 aa15.89■□□□□ 0.13
ZNF3-213ENST00000479192 DEFB132Q7Z7B7 95 aa15.88■□□□□ 0.13
ZNF3-213ENST00000479192 TONSLQ96HA7 1378 aa15.87■□□□□ 0.13
ZNF3-213ENST00000479192 GCP02774 474 aa15.87■□□□□ 0.13
ZNF3-213ENST00000479192 BAG6P46379 1132 aa15.86■□□□□ 0.13
ZNF3-213ENST00000479192 NLRP6P59044 892 aa15.86■□□□□ 0.13
ZNF3-213ENST00000479192 COL5A2P05997 1499 aaPredicted RBP15.85■□□□□ 0.13
ZNF3-213ENST00000479192 POTEDQ86YR6 584 aa15.85■□□□□ 0.13
ZNF3-213ENST00000479192 ZNF692Q9BU19 519 aaPredicted RBP15.85■□□□□ 0.13
ZNF3-213ENST00000479192 USP35Q9P2H5 1018 aa15.85■□□□□ 0.13
ZNF3-213ENST00000479192 RREB1Q92766 1687 aa15.85■□□□□ 0.13
ZNF3-213ENST00000479192 SBNO2Q9Y2G9 1366 aa15.85■□□□□ 0.13
ZNF3-213ENST00000479192 LRRC37A3O60309 1634 aa15.84■□□□□ 0.13
ZNF3-213ENST00000479192 KAT6BQ8WYB5 2073 aa15.84■□□□□ 0.13
ZNF3-213ENST00000479192 FAM182BQ5T319 152 aa15.84■□□□□ 0.13
ZNF3-213ENST00000479192 CARD11Q9BXL7 1154 aa15.84■□□□□ 0.13
ZNF3-213ENST00000479192 ZBTB7CA1YPR0 619 aa15.83■□□□□ 0.12
ZNF3-213ENST00000479192 LARP1Q6PKG0 1096 aaKnown RBP15.83■□□□□ 0.12
ZNF3-213ENST00000479192 BARGINQ6ZT62 677 aa15.83■□□□□ 0.12
ZNF3-213ENST00000479192 LRP5O75197 1615 aa15.83■□□□□ 0.12
ZNF3-213ENST00000479192 TCP11L2Q8N4U5 519 aa15.82■□□□□ 0.12
ZNF3-213ENST00000479192 TTC21AQ8NDW8 1320 aa15.82■□□□□ 0.12
ZNF3-213ENST00000479192 KTN1Q86UP2 1357 aaKnown RBP15.82■□□□□ 0.12
ZNF3-213ENST00000479192 CRB1P82279 1406 aa15.82■□□□□ 0.12
ZNF3-213ENST00000479192 CPSF1Q10570 1443 aaKnown RBP15.82■□□□□ 0.12
ZNF3-213ENST00000479192 NUP188Q5SRE5 1749 aa15.82■□□□□ 0.12
ZNF3-213ENST00000479192 TRIM26Q12899 539 aaPredicted RBP15.81■□□□□ 0.12
ZNF3-213ENST00000479192 AATKQ6ZMQ8 1374 aa15.81■□□□□ 0.12
ZNF3-213ENST00000479192 TTC21BQ7Z4L5 1316 aa15.81■□□□□ 0.12
ZNF3-213ENST00000479192 PEAK1Q9H792 1746 aa15.81■□□□□ 0.12
ZNF3-213ENST00000479192 THRAP3Q9Y2W1 955 aaKnown RBP15.81■□□□□ 0.12
ZNF3-213ENST00000479192 RGPD3A6NKT7 1758 aaPredicted RBP15.8■□□□□ 0.12
ZNF3-213ENST00000479192 RGPD4Q7Z3J3 1758 aa15.8■□□□□ 0.12
ZNF3-213ENST00000479192 NFAT5O94916 1531 aa15.8■□□□□ 0.12
ZNF3-213ENST00000479192 DISP2A7MBM2 1401 aa15.8■□□□□ 0.12
ZNF3-213ENST00000479192 PDE3BQ13370 1112 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms