RNA–Protein interactions for RNA: ENST00000478800.1

CDKN1A-207, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

TSL 2

Gene CDKN1A, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-207ENST00000478800 TOPAZ1Q8N9V7 1692 aa23.94■■□□□ 1.42
CDKN1A-207ENST00000478800 ATAD2Q6PL18 1390 aa23.93■■□□□ 1.42
CDKN1A-207ENST00000478800 SBNO2Q9Y2G9 1366 aa23.93■■□□□ 1.42
CDKN1A-207ENST00000478800 TRPM3Q9HCF6 1732 aaPredicted RBP23.92■■□□□ 1.42
CDKN1A-207ENST00000478800 SLC24A1O60721 1099 aa23.91■■□□□ 1.42
CDKN1A-207ENST00000478800 ABTB2Q8N961 1025 aa23.91■■□□□ 1.42
CDKN1A-207ENST00000478800 NUTM2GQ5VZR2 741 aa23.9■■□□□ 1.42
CDKN1A-207ENST00000478800 ST20-MTHFSA0A0A6YYL1 179 aa23.89■■□□□ 1.41
CDKN1A-207ENST00000478800 BRD4O60885 1362 aaPredicted RBP23.89■■□□□ 1.41
CDKN1A-207ENST00000478800 UNC5CLQ8IV45 518 aa23.88■■□□□ 1.41
CDKN1A-207ENST00000478800 ZNF692Q9BU19 519 aaPredicted RBP23.88■■□□□ 1.41
CDKN1A-207ENST00000478800 ALS2Q96Q42 1657 aa23.88■■□□□ 1.41
CDKN1A-207ENST00000478800 TMC1Q8TDI8 760 aa23.86■■□□□ 1.41
CDKN1A-207ENST00000478800 MARF1Q9Y4F3 1742 aaKnown RBP23.86■■□□□ 1.41
CDKN1A-207ENST00000478800 BCL9LQ86UU0 1499 aa23.86■■□□□ 1.41
CDKN1A-207ENST00000478800 FAM83GA6ND36 823 aa23.85■■□□□ 1.41
CDKN1A-207ENST00000478800 NLRP13Q86W25 1043 aa23.85■■□□□ 1.41
CDKN1A-207ENST00000478800 CDK12Q9NYV4 1490 aaPredicted RBP23.85■■□□□ 1.41
CDKN1A-207ENST00000478800 ATRNO75882 1429 aa23.84■■□□□ 1.41
CDKN1A-207ENST00000478800 USP6P35125 1406 aa23.84■■□□□ 1.41
CDKN1A-207ENST00000478800 USP47Q96K76 1375 aa23.84■■□□□ 1.41
CDKN1A-207ENST00000478800 PRDM11Q9NQV5 511 aa23.84■■□□□ 1.41
CDKN1A-207ENST00000478800 SLIT2O94813 1529 aa23.84■■□□□ 1.41
CDKN1A-207ENST00000478800 CCDC9Q9Y3X0 531 aaKnown RBP23.83■■□□□ 1.41
CDKN1A-207ENST00000478800 GJD4Q96KN9 370 aaPredicted RBP23.82■■□□□ 1.4
CDKN1A-207ENST00000478800 NLRP6P59044 892 aa23.81■■□□□ 1.4
CDKN1A-207ENST00000478800 PUS7Q96PZ0 661 aaKnown RBP23.81■■□□□ 1.4
CDKN1A-207ENST00000478800 ABCA3Q99758 1704 aa23.81■■□□□ 1.4
CDKN1A-207ENST00000478800 ZC3H6P61129 1189 aaKnown RBP23.8■■□□□ 1.4
CDKN1A-207ENST00000478800 HDGFL2Q7Z4V5 671 aaPredicted RBP23.8■■□□□ 1.4
CDKN1A-207ENST00000478800 TESK2Q96S53 571 aa23.8■■□□□ 1.4
CDKN1A-207ENST00000478800 BTG4Q9NY30 223 aa23.8■■□□□ 1.4
CDKN1A-207ENST00000478800 KTN1Q86UP2 1357 aaKnown RBP23.79■■□□□ 1.4
CDKN1A-207ENST00000478800 TMF1P82094 1093 aa23.79■■□□□ 1.4
CDKN1A-207ENST00000478800 RGS12O14924 1447 aa23.78■■□□□ 1.4
CDKN1A-207ENST00000478800 VPS72Q15906 364 aa23.78■■□□□ 1.4
CDKN1A-207ENST00000478800 KIAA0232Q92628 1395 aa23.78■■□□□ 1.4
CDKN1A-207ENST00000478800 TERF2IPQ9NYB0 399 aa23.77■■□□□ 1.4
CDKN1A-207ENST00000478800 TTC21BQ7Z4L5 1316 aa23.77■■□□□ 1.4
CDKN1A-207ENST00000478800 UPF1Q92900 1129 aaKnown RBP eCLIP23.76■■□□□ 1.39
CDKN1A-207ENST00000478800 SLC12A5Q9H2X9 1139 aa23.76■■□□□ 1.39
CDKN1A-207ENST00000478800 USP19O94966 1318 aa23.76■■□□□ 1.39
CDKN1A-207ENST00000478800 TTC21AQ8NDW8 1320 aa23.76■■□□□ 1.39
CDKN1A-207ENST00000478800 GCP02774 474 aa23.75■■□□□ 1.39
CDKN1A-207ENST00000478800 CHRNA2Q15822 529 aa23.75■■□□□ 1.39
CDKN1A-207ENST00000478800 CDCA8Q53HL2 280 aa23.75■■□□□ 1.39
CDKN1A-207ENST00000478800 CPSF1Q10570 1443 aaKnown RBP23.75■■□□□ 1.39
CDKN1A-207ENST00000478800 SSH2Q76I76 1423 aa23.74■■□□□ 1.39
CDKN1A-207ENST00000478800 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.73■■□□□ 1.39
CDKN1A-207ENST00000478800 COL14A1Q05707 1796 aaKnown RBP23.73■■□□□ 1.39
CDKN1A-207ENST00000478800 NINLQ9Y2I6 1382 aa23.73■■□□□ 1.39
CDKN1A-207ENST00000478800 PLCH1Q4KWH8 1693 aa23.73■■□□□ 1.39
CDKN1A-207ENST00000478800 ZBTB7CA1YPR0 619 aa23.72■■□□□ 1.39
CDKN1A-207ENST00000478800 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.72■■□□□ 1.39
CDKN1A-207ENST00000478800 NWD2Q9ULI1 1742 aa23.72■■□□□ 1.39
CDKN1A-207ENST00000478800 PHRF1Q9P1Y6 1649 aaKnown RBP23.71■■□□□ 1.39
CDKN1A-207ENST00000478800 EVA1CP58658 441 aa23.71■■□□□ 1.39
CDKN1A-207ENST00000478800 CRYBG1Q9Y4K1 1723 aa23.7■■□□□ 1.39
CDKN1A-207ENST00000478800 KCNH5Q8NCM2 988 aa23.7■■□□□ 1.38
CDKN1A-207ENST00000478800 STRN4Q9NRL3 753 aa23.7■■□□□ 1.38
CDKN1A-207ENST00000478800 CPDO75976 1380 aa23.69■■□□□ 1.38
CDKN1A-207ENST00000478800 A0A0G2JS52 829 aa23.69■■□□□ 1.38
CDKN1A-207ENST00000478800 MYT1Q01538 1121 aa23.69■■□□□ 1.38
CDKN1A-207ENST00000478800 NRKQ7Z2Y5 1582 aa23.67■■□□□ 1.38
CDKN1A-207ENST00000478800 AKAP12Q02952 1782 aa23.67■■□□□ 1.38
CDKN1A-207ENST00000478800 SOX12O15370 315 aa23.66■■□□□ 1.38
CDKN1A-207ENST00000478800 EIF4G2P78344 907 aaKnown RBP eCLIP23.66■■□□□ 1.381e-7■■■□□ 17.9
CDKN1A-207ENST00000478800 CD163L1Q9NR16 1453 aa23.66■■□□□ 1.38
CDKN1A-207ENST00000478800 A0A1W2PP64 1363 aa23.65■■□□□ 1.38
CDKN1A-207ENST00000478800 SEPT12Q8IYM1 358 aa23.65■■□□□ 1.38
CDKN1A-207ENST00000478800 EDC4Q6P2E9 1401 aaKnown RBP23.65■■□□□ 1.38
CDKN1A-207ENST00000478800 GLI3P10071 1580 aa23.65■■□□□ 1.38
CDKN1A-207ENST00000478800 NME9Q86XW9 330 aa23.64■■□□□ 1.37
CDKN1A-207ENST00000478800 PIK3C2AO00443 1686 aa23.64■■□□□ 1.37
CDKN1A-207ENST00000478800 SPATA31A5Q5VU36 1347 aa23.63■■□□□ 1.37
CDKN1A-207ENST00000478800 SPATA31A7Q8IWB4 1347 aa23.63■■□□□ 1.37
CDKN1A-207ENST00000478800 FAM98CQ17RN3 349 aaKnown RBP23.63■■□□□ 1.37
CDKN1A-207ENST00000478800 SLIT3O75094 1523 aa23.63■■□□□ 1.37
CDKN1A-207ENST00000478800 MON2Q7Z3U7 1717 aa23.62■■□□□ 1.37
CDKN1A-207ENST00000478800 NRAPQ86VF7 1730 aa23.62■■□□□ 1.37
CDKN1A-207ENST00000478800 ONECUT3O60422 494 aaPredicted RBP23.61■■□□□ 1.37
CDKN1A-207ENST00000478800 ANKRD36BQ8N2N9 1353 aa23.61■■□□□ 1.37
CDKN1A-207ENST00000478800 ZRANB1Q9UGI0 708 aa23.6■■□□□ 1.37
CDKN1A-207ENST00000478800 AATKQ6ZMQ8 1374 aa23.6■■□□□ 1.37
CDKN1A-207ENST00000478800 USP31Q70CQ4 1352 aa23.6■■□□□ 1.37
CDKN1A-207ENST00000478800 HSPA5P11021 654 aaKnown RBP23.59■■□□□ 1.37
CDKN1A-207ENST00000478800 USP35Q9P2H5 1018 aa23.59■■□□□ 1.37
CDKN1A-207ENST00000478800 SPATA31A1Q5TZJ5 1347 aa23.59■■□□□ 1.37
CDKN1A-207ENST00000478800 POLR3GLQ9BT43 218 aa23.58■■□□□ 1.37
CDKN1A-207ENST00000478800 LARP1Q6PKG0 1096 aaKnown RBP23.57■■□□□ 1.36
CDKN1A-207ENST00000478800 ARHGEF25Q86VW2 580 aa23.57■■□□□ 1.36
CDKN1A-207ENST00000478800 CAMTA1Q9Y6Y1 1673 aa23.57■■□□□ 1.36
CDKN1A-207ENST00000478800 KRT27Q7Z3Y8 459 aa23.56■■□□□ 1.36
CDKN1A-207ENST00000478800 COG3Q96JB2 828 aa23.55■■□□□ 1.36
CDKN1A-207ENST00000478800 TCP11L2Q8N4U5 519 aa23.54■■□□□ 1.36
CDKN1A-207ENST00000478800 EP400Q96L91 3159 aa23.53■■□□□ 1.36
CDKN1A-207ENST00000478800 CSB-PGBD3P0DP91 1061 aa23.53■■□□□ 1.36
CDKN1A-207ENST00000478800 TOM1L2Q6ZVM7 507 aa23.53■■□□□ 1.36
CDKN1A-207ENST00000478800 COL5A2P05997 1499 aaPredicted RBP23.53■■□□□ 1.36
CDKN1A-207ENST00000478800 LMO7Q8WWI1 1683 aa23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms