RNA–Protein interactions for RNA: ENST00000478451.1

GPNMB-210, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 862 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-210ENST00000478451 NEUROD2Q15784 382 aa8.2□□□□□ -1.1
GPNMB-210ENST00000478451 CSPP1Q1MSJ5 1256 aa8.2□□□□□ -1.1
GPNMB-210ENST00000478451 RSPH6AQ9H0K4 717 aa8.2□□□□□ -1.1
GPNMB-210ENST00000478451 ZBTB3Q9H5J0 574 aa8.2□□□□□ -1.1
GPNMB-210ENST00000478451 H3BM21 787 aa8.19□□□□□ -1.1
GPNMB-210ENST00000478451 GSK3AP49840 483 aa8.19□□□□□ -1.1
GPNMB-210ENST00000478451 PRPF38BQ5VTL8 546 aaKnown RBP8.19□□□□□ -1.1
GPNMB-210ENST00000478451 PRR7Q8TB68 274 aa8.19□□□□□ -1.1
GPNMB-210ENST00000478451 PLEKHG3A1L390 1219 aa8.18□□□□□ -1.1
GPNMB-210ENST00000478451 WNT7AO00755 349 aa8.18□□□□□ -1.1
GPNMB-210ENST00000478451 HRCP23327 699 aa8.18□□□□□ -1.1
GPNMB-210ENST00000478451 TUSC1Q2TAM9 212 aa8.18□□□□□ -1.1
GPNMB-210ENST00000478451 CABLES1Q8TDN4 633 aa8.18□□□□□ -1.1
GPNMB-210ENST00000478451 BRPF1P55201 1214 aaPredicted RBP8.17□□□□□ -1.1
GPNMB-210ENST00000478451 SH3D19Q5HYK7 790 aa8.17□□□□□ -1.1
GPNMB-210ENST00000478451 CCDC24Q8N4L8 307 aa8.17□□□□□ -1.1
GPNMB-210ENST00000478451 POLR3EQ9NVU0 708 aa8.17□□□□□ -1.1
GPNMB-210ENST00000478451 CFAP99D6REC4 459 aa8.16□□□□□ -1.1
GPNMB-210ENST00000478451 ZBTB24O43167 697 aaPredicted RBP8.16□□□□□ -1.1
GPNMB-210ENST00000478451 QPCTQ16769 361 aa8.16□□□□□ -1.1
GPNMB-210ENST00000478451 TMEM151AQ8N4L1 468 aa8.16□□□□□ -1.1
GPNMB-210ENST00000478451 NUDT12Q9BQG2 462 aa8.16□□□□□ -1.1
GPNMB-210ENST00000478451 PTPRNQ16849 979 aa8.15□□□□□ -1.1
GPNMB-210ENST00000478451 DESI1Q6ICB0 168 aa8.15□□□□□ -1.1
GPNMB-210ENST00000478451 NUTM2BA6NNL0 878 aaPredicted RBP8.14□□□□□ -1.11
GPNMB-210ENST00000478451 NUTM2EB1AL46 878 aaPredicted RBP8.14□□□□□ -1.11
GPNMB-210ENST00000478451 LILRB3O75022 631 aa8.14□□□□□ -1.11
GPNMB-210ENST00000478451 CCNYL3P0C7X3 344 aa8.14□□□□□ -1.11
GPNMB-210ENST00000478451 SKIV2LQ15477 1246 aaKnown RBP8.14□□□□□ -1.11
GPNMB-210ENST00000478451 NUTM2DQ5VT03 806 aaPredicted RBP8.14□□□□□ -1.11
GPNMB-210ENST00000478451 NUTM2AQ8IVF1 878 aaPredicted RBP8.14□□□□□ -1.11
GPNMB-210ENST00000478451 ERBB4Q15303 1308 aa8.13□□□□□ -1.11
GPNMB-210ENST00000478451 TRIM32Q13049 653 aa8.13□□□□□ -1.11
GPNMB-210ENST00000478451 XP32Q5T750 250 aa8.12□□□□□ -1.11
GPNMB-210ENST00000478451 RTL5Q5HYW3 569 aaPredicted RBP8.11□□□□□ -1.11
GPNMB-210ENST00000478451 TSC1Q92574 1164 aa8.11□□□□□ -1.11
GPNMB-210ENST00000478451 HPS1Q92902 700 aa8.11□□□□□ -1.11
GPNMB-210ENST00000478451 J3QL48 77 aa8.1□□□□□ -1.11
GPNMB-210ENST00000478451 GDF11O95390 407 aa8.1□□□□□ -1.11
GPNMB-210ENST00000478451 PTCRAQ6ISU1 281 aaPredicted RBP8.1□□□□□ -1.11
GPNMB-210ENST00000478451 LYPD8Q6UX82 237 aa8.1□□□□□ -1.11
GPNMB-210ENST00000478451 PROCA1Q8NCQ7 364 aaPredicted RBP8.1□□□□□ -1.11
GPNMB-210ENST00000478451 IL27Q8NEV9 243 aa8.1□□□□□ -1.11
GPNMB-210ENST00000478451 KRTAP4-8Q9BYQ9 185 aa8.1□□□□□ -1.11
GPNMB-210ENST00000478451 ATP1B4Q9UN42 357 aaPredicted RBP8.1□□□□□ -1.11
GPNMB-210ENST00000478451 HELBQ8NG08 1087 aaPredicted RBP8.09□□□□□ -1.11
GPNMB-210ENST00000478451 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.09□□□□□ -1.11
GPNMB-210ENST00000478451 EVA1BQ9NVM1 165 aa8.09□□□□□ -1.11
GPNMB-210ENST00000478451 RNF225M0QZC1 329 aaPredicted RBP8.08□□□□□ -1.12
GPNMB-210ENST00000478451 RASSF7Q02833 373 aa8.08□□□□□ -1.12
GPNMB-210ENST00000478451 KCNH2Q12809 1159 aa8.08□□□□□ -1.12
GPNMB-210ENST00000478451 UNC93B1Q9H1C4 597 aa8.08□□□□□ -1.12
GPNMB-210ENST00000478451 PER1O15534 1290 aaPredicted RBP8.07□□□□□ -1.12
GPNMB-210ENST00000478451 IGHA1P01876 353 aa8.07□□□□□ -1.12
GPNMB-210ENST00000478451 VSIG8P0DPA2 414 aa8.07□□□□□ -1.12
GPNMB-210ENST00000478451 FBXO31Q5XUX0 539 aaPredicted RBP8.07□□□□□ -1.12
GPNMB-210ENST00000478451 MRGPRX2Q96LB1 330 aa8.07□□□□□ -1.12
GPNMB-210ENST00000478451 GOPCQ9HD26 462 aa8.07□□□□□ -1.12
GPNMB-210ENST00000478451 F12P00748 615 aaPredicted RBP8.06□□□□□ -1.12
GPNMB-210ENST00000478451 CTHP32929 405 aa8.06□□□□□ -1.12
GPNMB-210ENST00000478451 VEGFBP49765 207 aa8.06□□□□□ -1.12
GPNMB-210ENST00000478451 WNT7BP56706 349 aa8.06□□□□□ -1.12
GPNMB-210ENST00000478451 MAP10Q9P2G4 905 aa8.06□□□□□ -1.12
GPNMB-210ENST00000478451 SKOR1P84550 965 aa8.05□□□□□ -1.12
GPNMB-210ENST00000478451 PPP2R2DQ66LE6 453 aa8.05□□□□□ -1.12
GPNMB-210ENST00000478451 PCMTD1Q96MG8 357 aaPredicted RBP8.05□□□□□ -1.12
GPNMB-210ENST00000478451 LINC01559Q495D7 138 aa8.03□□□□□ -1.12
GPNMB-210ENST00000478451 RC3H1Q5TC82 1133 aaKnown RBP8.03□□□□□ -1.12
GPNMB-210ENST00000478451 SH3BP2P78314 561 aa8.02□□□□□ -1.13
GPNMB-210ENST00000478451 CTDSPL2Q05D32 466 aa8.02□□□□□ -1.13
GPNMB-210ENST00000478451 BAP1Q92560 729 aa8.02□□□□□ -1.13
GPNMB-210ENST00000478451 ZNF511Q8NB15 262 aa8.01□□□□□ -1.13
GPNMB-210ENST00000478451 AP1G2O75843 785 aa8□□□□□ -1.13
GPNMB-210ENST00000478451 RFC5P40937 340 aa8□□□□□ -1.13
GPNMB-210ENST00000478451 TRIM46Q7Z4K8 759 aa8□□□□□ -1.13
GPNMB-210ENST00000478451 EHBP1Q8NDI1 1231 aa8□□□□□ -1.13
GPNMB-210ENST00000478451 LRRN4Q8WUT4 740 aa7.99□□□□□ -1.13
GPNMB-210ENST00000478451 DNMT3AQ9Y6K1 912 aaPredicted RBP7.99□□□□□ -1.13
GPNMB-210ENST00000478451 FOXK2Q01167 660 aa7.98□□□□□ -1.13
GPNMB-210ENST00000478451 USP17L8P0C7I0 530 aa7.97□□□□□ -1.13
GPNMB-210ENST00000478451 ARMC2Q8NEN0 867 aa7.97□□□□□ -1.13
GPNMB-210ENST00000478451 NBPF14Q5TI25 921 aa7.96□□□□□ -1.14
GPNMB-210ENST00000478451 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.95□□□□□ -1.14
GPNMB-210ENST00000478451 SIAH2O43255 324 aa7.95□□□□□ -1.14
GPNMB-210ENST00000478451 BMP1P13497 986 aa7.95□□□□□ -1.14
GPNMB-210ENST00000478451 FOXJ1Q92949 421 aa7.95□□□□□ -1.14
GPNMB-210ENST00000478451 KRTAP9-2Q9BYQ4 174 aa7.95□□□□□ -1.14
GPNMB-210ENST00000478451 CAPN5O15484 640 aaPredicted RBP7.94□□□□□ -1.14
GPNMB-210ENST00000478451 ALDH1A1P00352 501 aa7.94□□□□□ -1.14
GPNMB-210ENST00000478451 VARSP26640 1264 aaKnown RBP7.94□□□□□ -1.14
GPNMB-210ENST00000478451 NR6A1Q15406 480 aa7.94□□□□□ -1.14
GPNMB-210ENST00000478451 TMEM259Q4ZIN3 620 aa7.94□□□□□ -1.14
GPNMB-210ENST00000478451 GPAT2Q6NUI2 795 aa7.94□□□□□ -1.14
GPNMB-210ENST00000478451 HMX1Q9NP08 348 aaPredicted RBP7.94□□□□□ -1.14
GPNMB-210ENST00000478451 TLL2Q9Y6L7 1015 aa7.94□□□□□ -1.14
GPNMB-210ENST00000478451 AGERQ15109 404 aa7.93□□□□□ -1.14
GPNMB-210ENST00000478451 BPHLQ86WA6 291 aaPredicted RBP7.93□□□□□ -1.14
GPNMB-210ENST00000478451 C4orf48Q5BLP8 95 aa7.92□□□□□ -1.14
GPNMB-210ENST00000478451 FAM174AQ8TBP5 190 aa7.92□□□□□ -1.14
GPNMB-210ENST00000478451 GPKOWQ92917 476 aaPredicted RBP eCLIP7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms