RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 STRN4Q9NRL3 753 aa17.35■□□□□ 0.37
NPHP4-208ENST00000478423 TATP17735 454 aaPredicted RBP17.35■□□□□ 0.37
NPHP4-208ENST00000478423 PLCH2O75038 1416 aa17.35■□□□□ 0.37
NPHP4-208ENST00000478423 MVPQ14764 893 aaKnown RBP17.35■□□□□ 0.37
NPHP4-208ENST00000478423 NME9Q86XW9 330 aa17.35■□□□□ 0.37
NPHP4-208ENST00000478423 CCDC34Q96HJ3 373 aa17.34■□□□□ 0.37
NPHP4-208ENST00000478423 APPP05067 770 aa17.33■□□□□ 0.37
NPHP4-208ENST00000478423 MAPKBP1O60336 1514 aa17.33■□□□□ 0.37
NPHP4-208ENST00000478423 RNF20Q5VTR2 975 aa17.33■□□□□ 0.37
NPHP4-208ENST00000478423 SCAF11Q99590 1463 aaKnown RBP17.33■□□□□ 0.36
NPHP4-208ENST00000478423 GNAI2P04899 355 aa17.33■□□□□ 0.36
NPHP4-208ENST00000478423 GSE1Q14687 1217 aa17.33■□□□□ 0.36
NPHP4-208ENST00000478423 GCC1Q96CN9 775 aa17.32■□□□□ 0.36
NPHP4-208ENST00000478423 DISP3Q9P2K9 1392 aa17.32■□□□□ 0.36
NPHP4-208ENST00000478423 MSH5O43196 834 aa17.32■□□□□ 0.36
NPHP4-208ENST00000478423 WASLO00401 505 aaPredicted RBP17.31■□□□□ 0.36
NPHP4-208ENST00000478423 PHF14O94880 888 aa17.31■□□□□ 0.36
NPHP4-208ENST00000478423 ZC3H6P61129 1189 aaKnown RBP17.31■□□□□ 0.36
NPHP4-208ENST00000478423 AMOTL2Q9Y2J4 779 aa17.31■□□□□ 0.36
NPHP4-208ENST00000478423 EMILIN1Q9Y6C2 1016 aa17.31■□□□□ 0.36
NPHP4-208ENST00000478423 CPLX2Q6PUV4 134 aaKnown RBP17.31■□□□□ 0.36
NPHP4-208ENST00000478423 PRDM11Q9NQV5 511 aa17.31■□□□□ 0.36
NPHP4-208ENST00000478423 ZNF428Q96B54 188 aa17.3■□□□□ 0.36
NPHP4-208ENST00000478423 MCTP1Q6DN14 999 aa17.3■□□□□ 0.36
NPHP4-208ENST00000478423 RASSF8Q8NHQ8 419 aa17.3■□□□□ 0.36
NPHP4-208ENST00000478423 CHMP4CQ96CF2 233 aa17.3■□□□□ 0.36
NPHP4-208ENST00000478423 KDM5BQ9UGL1 1544 aa17.3■□□□□ 0.36
NPHP4-208ENST00000478423 SKOR2Q2VWA4 1001 aaPredicted RBP17.3■□□□□ 0.36
NPHP4-208ENST00000478423 TOM1L2Q6ZVM7 507 aa17.3■□□□□ 0.36
NPHP4-208ENST00000478423 BACH2Q9BYV9 841 aa17.29■□□□□ 0.36
NPHP4-208ENST00000478423 DCTN1Q14203 1278 aa17.29■□□□□ 0.36
NPHP4-208ENST00000478423 FAM135AQ9P2D6 1515 aa17.29■□□□□ 0.36
NPHP4-208ENST00000478423 CCT4P50991 539 aaKnown RBP17.29■□□□□ 0.36
NPHP4-208ENST00000478423 VPS37DQ86XT2 251 aa17.29■□□□□ 0.36
NPHP4-208ENST00000478423 RBM33Q96EV2 1170 aaKnown RBP17.29■□□□□ 0.36
NPHP4-208ENST00000478423 ASXL2Q76L83 1435 aa17.29■□□□□ 0.36
NPHP4-208ENST00000478423 NINLQ9Y2I6 1382 aa17.28■□□□□ 0.36
NPHP4-208ENST00000478423 SRCIN1Q9C0H9 1055 aa17.28■□□□□ 0.36
NPHP4-208ENST00000478423 DDX54Q8TDD1 881 aaKnown RBP17.28■□□□□ 0.36
NPHP4-208ENST00000478423 SYNE3Q6ZMZ3 975 aa17.27■□□□□ 0.36
NPHP4-208ENST00000478423 RBM42Q9BTD8 480 aaKnown RBP17.27■□□□□ 0.36
NPHP4-208ENST00000478423 TRDNQ13061 729 aa17.27■□□□□ 0.36
NPHP4-208ENST00000478423 C20orf194Q5TEA3 1177 aa17.27■□□□□ 0.36
NPHP4-208ENST00000478423 MCM10Q7L590 875 aa17.27■□□□□ 0.36
NPHP4-208ENST00000478423 MIS18AQ9NYP9 233 aa17.27■□□□□ 0.36
NPHP4-208ENST00000478423 CPLX1O14810 134 aa17.27■□□□□ 0.36
NPHP4-208ENST00000478423 SSH1Q8WYL5 1049 aa17.27■□□□□ 0.35
NPHP4-208ENST00000478423 PPP6R1Q9UPN7 881 aa17.27■□□□□ 0.35
NPHP4-208ENST00000478423 TMEM57Q8N5G2 664 aa17.26■□□□□ 0.35
NPHP4-208ENST00000478423 TRAPPC8Q9Y2L5 1435 aa17.26■□□□□ 0.35
NPHP4-208ENST00000478423 SYCP2Q9BX26 1530 aa17.26■□□□□ 0.35
NPHP4-208ENST00000478423 FOXO3O43524 673 aa17.26■□□□□ 0.35
NPHP4-208ENST00000478423 TPM4P67936 248 aa17.26■□□□□ 0.35
NPHP4-208ENST00000478423 AKAP17AQ02040 695 aaKnown RBP17.26■□□□□ 0.35
NPHP4-208ENST00000478423 VPS37CA5D8V6 355 aaPredicted RBP17.26■□□□□ 0.35
NPHP4-208ENST00000478423 RARSP54136 660 aaKnown RBP17.26■□□□□ 0.35
NPHP4-208ENST00000478423 NUCB2P80303 420 aa17.25■□□□□ 0.35
NPHP4-208ENST00000478423 FSD1Q9BTV5 496 aa17.25■□□□□ 0.35
NPHP4-208ENST00000478423 CABP4P57796 275 aa17.25■□□□□ 0.35
NPHP4-208ENST00000478423 CNTROBQ8N137 903 aa17.25■□□□□ 0.35
NPHP4-208ENST00000478423 SMC3Q9UQE7 1217 aa17.25■□□□□ 0.35
NPHP4-208ENST00000478423 ADAMTS12P58397 1594 aa17.25■□□□□ 0.35
NPHP4-208ENST00000478423 MEX3CQ5U5Q3 659 aaKnown RBP17.25■□□□□ 0.35
NPHP4-208ENST00000478423 FAM177BA6PVY3 158 aa17.25■□□□□ 0.35
NPHP4-208ENST00000478423 NFKBIBQ15653 356 aa17.25■□□□□ 0.35
NPHP4-208ENST00000478423 WASHC4Q2M389 1173 aa17.25■□□□□ 0.35
NPHP4-208ENST00000478423 SPG7Q9UQ90 795 aa17.24■□□□□ 0.35
NPHP4-208ENST00000478423 KCNH5Q8NCM2 988 aa17.24■□□□□ 0.35
NPHP4-208ENST00000478423 KIAA0556O60303 1618 aa17.23■□□□□ 0.35
NPHP4-208ENST00000478423 NEK4P51957 841 aa17.23■□□□□ 0.35
NPHP4-208ENST00000478423 PHF8Q9UPP1 1060 aa17.23■□□□□ 0.35
NPHP4-208ENST00000478423 GNAT3A8MTJ3 354 aa17.23■□□□□ 0.35
NPHP4-208ENST00000478423 CLSTN1O94985 981 aa17.23■□□□□ 0.35
NPHP4-208ENST00000478423 CTTNBP2Q8WZ74 1663 aa17.22■□□□□ 0.35
NPHP4-208ENST00000478423 MYL6BP14649 208 aa17.22■□□□□ 0.35
NPHP4-208ENST00000478423 DUSP27Q5VZP5 1158 aa17.22■□□□□ 0.35
NPHP4-208ENST00000478423 CHD1LQ86WJ1 897 aa17.22■□□□□ 0.35
NPHP4-208ENST00000478423 BTBD11A6QL63 1104 aa17.22■□□□□ 0.35
NPHP4-208ENST00000478423 WDR62O43379 1518 aa17.22■□□□□ 0.35
NPHP4-208ENST00000478423 LRRCC1Q9C099 1032 aa17.21■□□□□ 0.35
NPHP4-208ENST00000478423 A2MP01023 1474 aa17.21■□□□□ 0.35
NPHP4-208ENST00000478423 TCOF1Q13428 1488 aaKnown RBP17.21■□□□□ 0.35
NPHP4-208ENST00000478423 DUOX2Q9NRD8 1548 aa17.21■□□□□ 0.34
NPHP4-208ENST00000478423 ABCC11Q96J66 1382 aa17.2■□□□□ 0.34
NPHP4-208ENST00000478423 AMER1Q5JTC6 1135 aaPredicted RBP17.2■□□□□ 0.34
NPHP4-208ENST00000478423 CREBRFQ8IUR6 639 aa17.2■□□□□ 0.34
NPHP4-208ENST00000478423 NOL10Q9BSC4 688 aaKnown RBP17.2■□□□□ 0.34
NPHP4-208ENST00000478423 SRGAP3O43295 1099 aa17.2■□□□□ 0.34
NPHP4-208ENST00000478423 FBLN1P23142 703 aa17.2■□□□□ 0.34
NPHP4-208ENST00000478423 RALYLQ86SE5 291 aaKnown RBP17.2■□□□□ 0.34
NPHP4-208ENST00000478423 SIL1Q9H173 461 aa17.2■□□□□ 0.34
NPHP4-208ENST00000478423 RPAP2Q8IXW5 612 aaPredicted RBP17.19■□□□□ 0.34
NPHP4-208ENST00000478423 USHBP1Q8N6Y0 703 aa17.19■□□□□ 0.34
NPHP4-208ENST00000478423 DNAJC2Q99543 621 aaKnown RBP17.19■□□□□ 0.34
NPHP4-208ENST00000478423 MARCH6O60337 910 aa17.19■□□□□ 0.34
NPHP4-208ENST00000478423 ERC1Q8IUD2 1116 aa17.19■□□□□ 0.34
NPHP4-208ENST00000478423 IFT57Q9NWB7 429 aa17.19■□□□□ 0.34
NPHP4-208ENST00000478423 PRAG1Q86YV5 1406 aa17.19■□□□□ 0.34
NPHP4-208ENST00000478423 TRIM29Q14134 588 aa17.19■□□□□ 0.34
NPHP4-208ENST00000478423 SKAP1Q86WV1 359 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms