RNA–Protein interactions for RNA: ENST00000478282.1

U2AF1-210, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 2

Gene U2AF1, Length 3,344 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-210ENST00000478282 TNNQ9UQP3 1299 aa18.9■□□□□ 0.62
U2AF1-210ENST00000478282 ADGRF5Q8IZF2 1346 aa18.9■□□□□ 0.62
U2AF1-210ENST00000478282 TMEM2Q9UHN6 1383 aa18.9■□□□□ 0.62
U2AF1-210ENST00000478282 RIMS2Q9UQ26 1411 aa18.89■□□□□ 0.62
U2AF1-210ENST00000478282 GOLGA6L3A6NEY3 463 aa18.89■□□□□ 0.61
U2AF1-210ENST00000478282 MCM4P33991 863 aa18.89■□□□□ 0.61
U2AF1-210ENST00000478282 XRCC6P12956 609 aaKnown RBP eCLIP18.88■□□□□ 0.61
U2AF1-210ENST00000478282 NEUROD2Q15784 382 aa18.88■□□□□ 0.61
U2AF1-210ENST00000478282 WDR63Q8IWG1 891 aa18.88■□□□□ 0.61
U2AF1-210ENST00000478282 CFAP70Q5T0N1 1121 aa18.87■□□□□ 0.61
U2AF1-210ENST00000478282 RRP7AQ9Y3A4 280 aaKnown RBP18.87■□□□□ 0.61
U2AF1-210ENST00000478282 TCP11L2Q8N4U5 519 aa18.87■□□□□ 0.61
U2AF1-210ENST00000478282 SBNO2Q9Y2G9 1366 aa18.86■□□□□ 0.61
U2AF1-210ENST00000478282 BCL2L13Q9BXK5 485 aa18.85■□□□□ 0.61
U2AF1-210ENST00000478282 VGFO15240 615 aaPredicted RBP18.85■□□□□ 0.61
U2AF1-210ENST00000478282 ALKQ9UM73 1620 aa18.84■□□□□ 0.61
U2AF1-210ENST00000478282 NSD3Q9BZ95 1437 aa18.84■□□□□ 0.61
U2AF1-210ENST00000478282 MORC1Q86VD1 984 aa18.84■□□□□ 0.61
U2AF1-210ENST00000478282 C14orf93Q9H972 538 aaKnown RBP18.84■□□□□ 0.61
U2AF1-210ENST00000478282 CHMP5Q9NZZ3 219 aa18.84■□□□□ 0.61
U2AF1-210ENST00000478282 MED14O60244 1454 aa18.84■□□□□ 0.61
U2AF1-210ENST00000478282 CCDC27Q2M243 656 aa18.84■□□□□ 0.61
U2AF1-210ENST00000478282 SPRYD3Q8NCJ5 442 aa18.83■□□□□ 0.61
U2AF1-210ENST00000478282 ARXQ96QS3 562 aa18.83■□□□□ 0.61
U2AF1-210ENST00000478282 CHGAP10645 457 aaKnown RBP18.83■□□□□ 0.6
U2AF1-210ENST00000478282 MVPQ14764 893 aaKnown RBP18.83■□□□□ 0.6
U2AF1-210ENST00000478282 C22orf23Q9BZE7 217 aa18.82■□□□□ 0.6
U2AF1-210ENST00000478282 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.81■□□□□ 0.6
U2AF1-210ENST00000478282 GZF1Q9H116 711 aaPredicted RBP18.81■□□□□ 0.6
U2AF1-210ENST00000478282 PANK2Q9BZ23 570 aa18.81■□□□□ 0.6
U2AF1-210ENST00000478282 PLEKHG1Q9ULL1 1385 aa18.8■□□□□ 0.6
U2AF1-210ENST00000478282 TRAK2O60296 914 aa18.8■□□□□ 0.6
U2AF1-210ENST00000478282 CLCN1P35523 988 aa18.8■□□□□ 0.6
U2AF1-210ENST00000478282 MYH16Q9H6N6 1097 aa18.8■□□□□ 0.6
U2AF1-210ENST00000478282 USP32Q8NFA0 1604 aa18.8■□□□□ 0.6
U2AF1-210ENST00000478282 DIP2AQ14689 1571 aa18.79■□□□□ 0.6
U2AF1-210ENST00000478282 TNNT2P45379 298 aaPredicted RBP18.79■□□□□ 0.6
U2AF1-210ENST00000478282 MFAP1P55081 439 aaKnown RBP18.79■□□□□ 0.6
U2AF1-210ENST00000478282 THEMISQ8N1K5 641 aaPredicted RBP18.79■□□□□ 0.6
U2AF1-210ENST00000478282 KNDC1Q76NI1 1749 aa18.78■□□□□ 0.6
U2AF1-210ENST00000478282 NCBP3Q53F19 620 aaKnown RBP18.78■□□□□ 0.6
U2AF1-210ENST00000478282 ZKSCAN2Q63HK3 967 aa18.78■□□□□ 0.6
U2AF1-210ENST00000478282 MRE11P49959 708 aa18.77■□□□□ 0.6
U2AF1-210ENST00000478282 ADAMTS13Q76LX8 1427 aa18.77■□□□□ 0.6
U2AF1-210ENST00000478282 PNNQ9H307 717 aaKnown RBP18.77■□□□□ 0.6
U2AF1-210ENST00000478282 DZIP1LQ8IYY4 767 aaKnown RBP18.77■□□□□ 0.6
U2AF1-210ENST00000478282 ARHGEF28Q8N1W1 1705 aaKnown RBP18.77■□□□□ 0.6
U2AF1-210ENST00000478282 FTSJ3Q8IY81 847 aaKnown RBP18.77■□□□□ 0.59
U2AF1-210ENST00000478282 STAG3Q9UJ98 1225 aa18.77■□□□□ 0.59
U2AF1-210ENST00000478282 LTKP29376 864 aa18.76■□□□□ 0.59
U2AF1-210ENST00000478282 ADGRB2O60241 1585 aa18.76■□□□□ 0.59
U2AF1-210ENST00000478282 HDGFP51858 240 aaKnown RBP18.76■□□□□ 0.59
U2AF1-210ENST00000478282 CFAP53Q96M91 514 aa18.76■□□□□ 0.59
U2AF1-210ENST00000478282 DDX11L8A8MPP1 907 aa18.75■□□□□ 0.59
U2AF1-210ENST00000478282 MTHFSP49914 203 aa18.75■□□□□ 0.59
U2AF1-210ENST00000478282 QRICH2Q9H0J4 1663 aa18.75■□□□□ 0.59
U2AF1-210ENST00000478282 HDAC1Q13547 482 aaPredicted RBP18.75■□□□□ 0.59
U2AF1-210ENST00000478282 HSCBQ8IWL3 235 aa18.75■□□□□ 0.59
U2AF1-210ENST00000478282 NAP1L5Q96NT1 182 aaPredicted RBP18.74■□□□□ 0.59
U2AF1-210ENST00000478282 ZNF692Q9BU19 519 aaPredicted RBP18.74■□□□□ 0.59
U2AF1-210ENST00000478282 LMTK3Q96Q04 1460 aa18.74■□□□□ 0.59
U2AF1-210ENST00000478282 NCOA3Q9Y6Q9 1424 aa18.74■□□□□ 0.59
U2AF1-210ENST00000478282 CT47B1P0C2W7 299 aaPredicted RBP18.74■□□□□ 0.59
U2AF1-210ENST00000478282 SLC12A5Q9H2X9 1139 aa18.74■□□□□ 0.59
U2AF1-210ENST00000478282 DLC1Q96QB1 1528 aa18.74■□□□□ 0.59
U2AF1-210ENST00000478282 ISY1Q9ULR0 285 aaKnown RBP18.73■□□□□ 0.59
U2AF1-210ENST00000478282 GRPEL1Q9HAV7 217 aa18.72■□□□□ 0.59
U2AF1-210ENST00000478282 TECPR2O15040 1411 aa18.71■□□□□ 0.58
U2AF1-210ENST00000478282 DDIT3P35638 169 aa18.71■□□□□ 0.58
U2AF1-210ENST00000478282 NUTM2DQ5VT03 806 aaPredicted RBP18.71■□□□□ 0.58
U2AF1-210ENST00000478282 DDX19BQ9UMR2 479 aa18.7■□□□□ 0.58
U2AF1-210ENST00000478282 SMC5Q8IY18 1101 aa18.7■□□□□ 0.58
U2AF1-210ENST00000478282 SMC4Q9NTJ3 1288 aa18.7■□□□□ 0.58
U2AF1-210ENST00000478282 TRIM27P14373 513 aa18.69■□□□□ 0.58
U2AF1-210ENST00000478282 CPS1P31327 1500 aa18.69■□□□□ 0.58
U2AF1-210ENST00000478282 XRN1Q8IZH2 1706 aaKnown RBP18.68■□□□□ 0.58
U2AF1-210ENST00000478282 U2AF1L5P0DN76 240 aaPredicted RBP18.68■□□□□ 0.58
U2AF1-210ENST00000478282 U2AF1Q01081 240 aaKnown RBP eCLIP18.68■□□□□ 0.58
U2AF1-210ENST00000478282 RBM25P49756 843 aaKnown RBP18.68■□□□□ 0.58
U2AF1-210ENST00000478282 TXNDC2Q86VQ3 553 aa18.68■□□□□ 0.58
U2AF1-210ENST00000478282 TSR2Q969E8 191 aaKnown RBP18.68■□□□□ 0.58
U2AF1-210ENST00000478282 SNX21Q969T3 373 aa18.68■□□□□ 0.58
U2AF1-210ENST00000478282 YTHDC2Q9H6S0 1430 aaKnown RBP18.68■□□□□ 0.58
U2AF1-210ENST00000478282 STRCQ7RTU9 1775 aa18.68■□□□□ 0.58
U2AF1-210ENST00000478282 PLPPR3Q6T4P5 718 aa18.67■□□□□ 0.58
U2AF1-210ENST00000478282 ITPRIPQ8IWB1 547 aa18.67■□□□□ 0.58
U2AF1-210ENST00000478282 TRAK1Q9UPV9 953 aa18.67■□□□□ 0.58
U2AF1-210ENST00000478282 EID1Q9Y6B2 187 aa18.67■□□□□ 0.58
U2AF1-210ENST00000478282 CHD2O14647 1828 aaKnown RBP18.66■□□□□ 0.58
U2AF1-210ENST00000478282 NSD2O96028 1365 aa18.66■□□□□ 0.58
U2AF1-210ENST00000478282 METP08581 1390 aa18.66■□□□□ 0.58
U2AF1-210ENST00000478282 EXOSC9Q06265 439 aaKnown RBP18.66■□□□□ 0.58
U2AF1-210ENST00000478282 ATF7IPQ6VMQ6 1270 aa18.66■□□□□ 0.58
U2AF1-210ENST00000478282 ABCC11Q96J66 1382 aa18.65■□□□□ 0.58
U2AF1-210ENST00000478282 ESPNB1AK53 854 aa18.65■□□□□ 0.58
U2AF1-210ENST00000478282 GLIPR1L2Q4G1C9 344 aa18.65■□□□□ 0.58
U2AF1-210ENST00000478282 SSH1Q8WYL5 1049 aa18.65■□□□□ 0.58
U2AF1-210ENST00000478282 CIZ1Q9ULV3 898 aaPredicted RBP18.65■□□□□ 0.58
U2AF1-210ENST00000478282 TBX22Q9Y458 520 aa18.64■□□□□ 0.58
U2AF1-210ENST00000478282 PIK3R4Q99570 1358 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms