RNA–Protein interactions for RNA: ENST00000478087.5

HPS1-211, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 5

Gene HPS1, Length 971 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-211ENST00000478087 CRYBG1Q9Y4K1 1723 aa18.71■□□□□ 0.59
HPS1-211ENST00000478087 NUTM2GQ5VZR2 741 aa18.71■□□□□ 0.59
HPS1-211ENST00000478087 BRWD3Q6RI45 1802 aa18.71■□□□□ 0.59
HPS1-211ENST00000478087 GLI3P10071 1580 aa18.71■□□□□ 0.59
HPS1-211ENST00000478087 ACEP12821 1306 aa18.71■□□□□ 0.59
HPS1-211ENST00000478087 EP400Q96L91 3159 aa18.7■□□□□ 0.58
HPS1-211ENST00000478087 CCDC61Q9Y6R9 512 aa18.7■□□□□ 0.58
HPS1-211ENST00000478087 SRPK2P78362 688 aaKnown RBP18.69■□□□□ 0.58
HPS1-211ENST00000478087 NWD2Q9ULI1 1742 aa18.69■□□□□ 0.58
HPS1-211ENST00000478087 PLEKHG3A1L390 1219 aa18.68■□□□□ 0.58
HPS1-211ENST00000478087 RALGAPBQ86X10 1494 aa18.68■□□□□ 0.58
HPS1-211ENST00000478087 POLR3AO14802 1390 aaPredicted RBP18.67■□□□□ 0.58
HPS1-211ENST00000478087 ROCK2O75116 1388 aaKnown RBP18.67■□□□□ 0.58
HPS1-211ENST00000478087 NRAPQ86VF7 1730 aa18.65■□□□□ 0.58
HPS1-211ENST00000478087 PPIP5K1Q6PFW1 1433 aa18.65■□□□□ 0.58
HPS1-211ENST00000478087 VPS72Q15906 364 aa18.64■□□□□ 0.57
HPS1-211ENST00000478087 BTG4Q9NY30 223 aa18.64■□□□□ 0.57
HPS1-211ENST00000478087 CABP1Q9NZU7 370 aa18.64■□□□□ 0.57
HPS1-211ENST00000478087 CCDC9Q9Y3X0 531 aaKnown RBP18.64■□□□□ 0.57
HPS1-211ENST00000478087 PHRF1Q9P1Y6 1649 aaKnown RBP18.63■□□□□ 0.57
HPS1-211ENST00000478087 COL14A1Q05707 1796 aaKnown RBP18.63■□□□□ 0.57
HPS1-211ENST00000478087 ZC3H6P61129 1189 aaKnown RBP18.62■□□□□ 0.57
HPS1-211ENST00000478087 CHRNA2Q15822 529 aa18.62■□□□□ 0.57
HPS1-211ENST00000478087 ABTB2Q8N961 1025 aa18.61■□□□□ 0.57
HPS1-211ENST00000478087 ATAD2Q6PL18 1390 aa18.6■□□□□ 0.57
HPS1-211ENST00000478087 SEPT12Q8IYM1 358 aa18.6■□□□□ 0.57
HPS1-211ENST00000478087 KIAA0232Q92628 1395 aa18.59■□□□□ 0.57
HPS1-211ENST00000478087 PRDM11Q9NQV5 511 aa18.59■□□□□ 0.57
HPS1-211ENST00000478087 TONSLQ96HA7 1378 aa18.58■□□□□ 0.57
HPS1-211ENST00000478087 EVC2Q86UK5 1308 aa18.58■□□□□ 0.57
HPS1-211ENST00000478087 ONECUT3O60422 494 aaPredicted RBP18.57■□□□□ 0.56
HPS1-211ENST00000478087 CARD11Q9BXL7 1154 aa18.57■□□□□ 0.56
HPS1-211ENST00000478087 FAM98CQ17RN3 349 aaKnown RBP18.56■□□□□ 0.56
HPS1-211ENST00000478087 AKAP12Q02952 1782 aa18.55■□□□□ 0.56
HPS1-211ENST00000478087 STRN4Q9NRL3 753 aa18.54■□□□□ 0.56
HPS1-211ENST00000478087 USP6P35125 1406 aa18.54■□□□□ 0.56
HPS1-211ENST00000478087 NRKQ7Z2Y5 1582 aa18.54■□□□□ 0.56
HPS1-211ENST00000478087 SPATA31A5Q5VU36 1347 aa18.53■□□□□ 0.56
HPS1-211ENST00000478087 SPATA31A7Q8IWB4 1347 aa18.53■□□□□ 0.56
HPS1-211ENST00000478087 USP19O94966 1318 aa18.52■□□□□ 0.56
HPS1-211ENST00000478087 SSH2Q76I76 1423 aa18.52■□□□□ 0.56
HPS1-211ENST00000478087 A0A0G2JS52 829 aa18.52■□□□□ 0.56
HPS1-211ENST00000478087 GCP02774 474 aa18.52■□□□□ 0.56
HPS1-211ENST00000478087 MYT1Q01538 1121 aa18.52■□□□□ 0.56
HPS1-211ENST00000478087 NLRP13Q86W25 1043 aa18.52■□□□□ 0.56
HPS1-211ENST00000478087 PIK3C2AO00443 1686 aa18.51■□□□□ 0.55
HPS1-211ENST00000478087 CAMTA1Q9Y6Y1 1673 aa18.51■□□□□ 0.55
HPS1-211ENST00000478087 NLRP6P59044 892 aa18.51■□□□□ 0.55
HPS1-211ENST00000478087 FAM182BQ5T319 152 aa18.51■□□□□ 0.55
HPS1-211ENST00000478087 KRT27Q7Z3Y8 459 aa18.5■□□□□ 0.55
HPS1-211ENST00000478087 ZBTB7CA1YPR0 619 aa18.49■□□□□ 0.55
HPS1-211ENST00000478087 RGPD5Q99666 1765 aa18.49■□□□□ 0.55
HPS1-211ENST00000478087 LMO7Q8WWI1 1683 aa18.48■□□□□ 0.55
HPS1-211ENST00000478087 EVA1CP58658 441 aa18.48■□□□□ 0.55
HPS1-211ENST00000478087 USP35Q9P2H5 1018 aa18.48■□□□□ 0.55
HPS1-211ENST00000478087 SPATA31A1Q5TZJ5 1347 aa18.48■□□□□ 0.55
HPS1-211ENST00000478087 TTC21BQ7Z4L5 1316 aa18.48■□□□□ 0.55
HPS1-211ENST00000478087 LARP1Q6PKG0 1096 aaKnown RBP18.47■□□□□ 0.55
HPS1-211ENST00000478087 PCGF6Q9BYE7 350 aa18.47■□□□□ 0.55
HPS1-211ENST00000478087 ZRANB1Q9UGI0 708 aa18.47■□□□□ 0.55
HPS1-211ENST00000478087 BRD4O60885 1362 aaPredicted RBP18.46■□□□□ 0.55
HPS1-211ENST00000478087 CPDO75976 1380 aa18.46■□□□□ 0.55
HPS1-211ENST00000478087 DEFB132Q7Z7B7 95 aa18.46■□□□□ 0.55
HPS1-211ENST00000478087 ZNF692Q9BU19 519 aaPredicted RBP18.46■□□□□ 0.55
HPS1-211ENST00000478087 SLC12A5Q9H2X9 1139 aa18.46■□□□□ 0.55
HPS1-211ENST00000478087 THSD7AQ9UPZ6 1657 aa18.46■□□□□ 0.55
HPS1-211ENST00000478087 CPSF1Q10570 1443 aaKnown RBP18.46■□□□□ 0.55
HPS1-211ENST00000478087 MON2Q7Z3U7 1717 aa18.46■□□□□ 0.55
HPS1-211ENST00000478087 COL18A1P39060 1754 aa18.45■□□□□ 0.54
HPS1-211ENST00000478087 SBNO2Q9Y2G9 1366 aa18.45■□□□□ 0.54
HPS1-211ENST00000478087 ST20-MTHFSA0A0A6YYL1 179 aa18.45■□□□□ 0.54
HPS1-211ENST00000478087 SOX12O15370 315 aa18.45■□□□□ 0.54
HPS1-211ENST00000478087 CCDC125Q86Z20 511 aa18.45■□□□□ 0.54
HPS1-211ENST00000478087 SLIT3O75094 1523 aa18.44■□□□□ 0.54
HPS1-211ENST00000478087 KTN1Q86UP2 1357 aaKnown RBP18.44■□□□□ 0.54
HPS1-211ENST00000478087 TMC1Q8TDI8 760 aa18.44■□□□□ 0.54
HPS1-211ENST00000478087 CD163L1Q9NR16 1453 aa18.44■□□□□ 0.54
HPS1-211ENST00000478087 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.43■□□□□ 0.54
HPS1-211ENST00000478087 TESK2Q96S53 571 aa18.43■□□□□ 0.54
HPS1-211ENST00000478087 BLMP54132 1417 aaPredicted RBP18.42■□□□□ 0.54
HPS1-211ENST00000478087 AXIN2Q9Y2T1 843 aa18.42■□□□□ 0.54
HPS1-211ENST00000478087 SRCAPQ6ZRS2 3230 aa18.41■□□□□ 0.54
HPS1-211ENST00000478087 COL5A2P05997 1499 aaPredicted RBP18.39■□□□□ 0.54
HPS1-211ENST00000478087 NME9Q86XW9 330 aa18.39■□□□□ 0.53
HPS1-211ENST00000478087 TTC21AQ8NDW8 1320 aa18.39■□□□□ 0.53
HPS1-211ENST00000478087 ARHGEF25Q86VW2 580 aa18.38■□□□□ 0.53
HPS1-211ENST00000478087 AATKQ6ZMQ8 1374 aa18.38■□□□□ 0.53
HPS1-211ENST00000478087 BARGINQ6ZT62 677 aa18.37■□□□□ 0.53
HPS1-211ENST00000478087 TCP11L2Q8N4U5 519 aa18.37■□□□□ 0.53
HPS1-211ENST00000478087 SF3B2Q13435 895 aaKnown RBP18.36■□□□□ 0.53
HPS1-211ENST00000478087 NFAT5O94916 1531 aa18.35■□□□□ 0.53
HPS1-211ENST00000478087 LTN1O94822 1766 aa18.35■□□□□ 0.53
HPS1-211ENST00000478087 RGPD1P0DJD0 1748 aa18.35■□□□□ 0.53
HPS1-211ENST00000478087 A0A1W2PP64 1363 aa18.34■□□□□ 0.53
HPS1-211ENST00000478087 EN1Q05925 392 aaPredicted RBP18.34■□□□□ 0.53
HPS1-211ENST00000478087 HDGFL2Q7Z4V5 671 aaPredicted RBP18.34■□□□□ 0.53
HPS1-211ENST00000478087 KCNH5Q8NCM2 988 aa18.34■□□□□ 0.53
HPS1-211ENST00000478087 TNS1Q9HBL0 1735 aaKnown RBP18.34■□□□□ 0.53
HPS1-211ENST00000478087 CRB1P82279 1406 aa18.33■□□□□ 0.53
HPS1-211ENST00000478087 TRIM37O94972 964 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms