RNA–Protein interactions for RNA: ENST00000477763.1

SMNDC1-205, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 2

Gene SMNDC1, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-205ENST00000477763 WNT7BP56706 349 aa9.54□□□□□ -0.88
SMNDC1-205ENST00000477763 HMX1Q9NP08 348 aaPredicted RBP9.54□□□□□ -0.88
SMNDC1-205ENST00000477763 GDF9O60383 454 aa9.53□□□□□ -0.88
SMNDC1-205ENST00000477763 PRR20EP86478 221 aa9.53□□□□□ -0.88
SMNDC1-205ENST00000477763 PRR20CP86479 221 aa9.53□□□□□ -0.88
SMNDC1-205ENST00000477763 PRR20DP86480 221 aa9.53□□□□□ -0.88
SMNDC1-205ENST00000477763 PRR20BP86481 221 aa9.53□□□□□ -0.88
SMNDC1-205ENST00000477763 PRR20AP86496 221 aa9.53□□□□□ -0.88
SMNDC1-205ENST00000477763 ZNF697Q5TEC3 545 aa9.53□□□□□ -0.88
SMNDC1-205ENST00000477763 MTMR14Q8NCE2 650 aa9.53□□□□□ -0.88
SMNDC1-205ENST00000477763 PNMA1Q8ND90 353 aa9.53□□□□□ -0.88
SMNDC1-205ENST00000477763 GPKOWQ92917 476 aaPredicted RBP eCLIP9.53□□□□□ -0.88
SMNDC1-205ENST00000477763 ZC3H4Q9UPT8 1303 aaKnown RBP9.53□□□□□ -0.88
SMNDC1-205ENST00000477763 NR6A1Q15406 480 aa9.52□□□□□ -0.89
SMNDC1-205ENST00000477763 ZNF787Q6DD87 383 aa9.52□□□□□ -0.89
SMNDC1-205ENST00000477763 GJD4Q96KN9 370 aaPredicted RBP9.52□□□□□ -0.89
SMNDC1-205ENST00000477763 TRIM34Q9BYJ4 488 aa9.52□□□□□ -0.89
SMNDC1-205ENST00000477763 SNRKQ9NRH2 765 aa9.52□□□□□ -0.89
SMNDC1-205ENST00000477763 MYT1Q01538 1121 aa9.51□□□□□ -0.89
SMNDC1-205ENST00000477763 FLIIQ13045 1269 aa9.51□□□□□ -0.89
SMNDC1-205ENST00000477763 NBPF14Q5TI25 921 aa9.51□□□□□ -0.89
SMNDC1-205ENST00000477763 ERICH6Q7L0X2 663 aa9.51□□□□□ -0.89
SMNDC1-205ENST00000477763 FKBPLQ9UIM3 349 aa9.51□□□□□ -0.89
SMNDC1-205ENST00000477763 MCM6Q14566 821 aa9.5□□□□□ -0.89
SMNDC1-205ENST00000477763 TNFRSF10AO00220 468 aa9.49□□□□□ -0.89
SMNDC1-205ENST00000477763 ZNF511Q8NB15 262 aa9.49□□□□□ -0.89
SMNDC1-205ENST00000477763 EPS8L1Q8TE68 723 aa9.49□□□□□ -0.89
SMNDC1-205ENST00000477763 BAP1Q92560 729 aa9.49□□□□□ -0.89
SMNDC1-205ENST00000477763 DGAT1O75907 488 aa9.48□□□□□ -0.89
SMNDC1-205ENST00000477763 SH3BP2P78314 561 aa9.48□□□□□ -0.89
SMNDC1-205ENST00000477763 SKOR1P84550 965 aa9.48□□□□□ -0.89
SMNDC1-205ENST00000477763 WNT7AO00755 349 aa9.47□□□□□ -0.89
SMNDC1-205ENST00000477763 PDXDC2PQ6P474 469 aa9.47□□□□□ -0.89
SMNDC1-205ENST00000477763 PRM3Q9NNZ6 103 aa9.47□□□□□ -0.89
SMNDC1-205ENST00000477763 NDUFB9Q9Y6M9 179 aa9.47□□□□□ -0.89
SMNDC1-205ENST00000477763 LINC01559Q495D7 138 aa9.46□□□□□ -0.9
SMNDC1-205ENST00000477763 PKDCCQ504Y2 493 aa9.46□□□□□ -0.9
SMNDC1-205ENST00000477763 PKD2L1Q9P0L9 805 aa9.46□□□□□ -0.9
SMNDC1-205ENST00000477763 GPSM3Q9Y4H4 160 aa9.46□□□□□ -0.9
SMNDC1-205ENST00000477763 POTECB2RU33 542 aa9.45□□□□□ -0.9
SMNDC1-205ENST00000477763 ZNF775Q96BV0 537 aaPredicted RBP9.45□□□□□ -0.9
SMNDC1-205ENST00000477763 RC3H1Q5TC82 1133 aaKnown RBP9.44□□□□□ -0.9
SMNDC1-205ENST00000477763 SH3BP5LQ7L8J4 393 aa9.44□□□□□ -0.9
SMNDC1-205ENST00000477763 BPHLQ86WA6 291 aaPredicted RBP9.44□□□□□ -0.9
SMNDC1-205ENST00000477763 FAM187AA6NFU0 413 aa9.43□□□□□ -0.9
SMNDC1-205ENST00000477763 VARSP26640 1264 aaKnown RBP9.43□□□□□ -0.9
SMNDC1-205ENST00000477763 SH3RF1Q7Z6J0 888 aa9.43□□□□□ -0.9
SMNDC1-205ENST00000477763 GPR37L1O60883 481 aa9.42□□□□□ -0.9
SMNDC1-205ENST00000477763 PTK2Q05397 1052 aa9.42□□□□□ -0.9
SMNDC1-205ENST00000477763 EHBP1Q8NDI1 1231 aa9.42□□□□□ -0.9
SMNDC1-205ENST00000477763 FOXJ1Q92949 421 aa9.42□□□□□ -0.9
SMNDC1-205ENST00000477763 FOXC1Q12948 553 aa9.41□□□□□ -0.9
SMNDC1-205ENST00000477763 MPNDQ8N594 471 aa9.4□□□□□ -0.9
SMNDC1-205ENST00000477763 MRGPRX2Q96LB1 330 aa9.4□□□□□ -0.9
SMNDC1-205ENST00000477763 C1QTNF2Q9BXJ5 285 aa9.4□□□□□ -0.9
SMNDC1-205ENST00000477763 TBC1D2BQ9UPU7 963 aa9.4□□□□□ -0.9
SMNDC1-205ENST00000477763 ST8SIA5O15466 376 aa9.39□□□□□ -0.91
SMNDC1-205ENST00000477763 AGERQ15109 404 aa9.39□□□□□ -0.91
SMNDC1-205ENST00000477763 C4orf48Q5BLP8 95 aa9.39□□□□□ -0.91
SMNDC1-205ENST00000477763 FAM174AQ8TBP5 190 aa9.39□□□□□ -0.91
SMNDC1-205ENST00000477763 ARHGAP9Q9BRR9 750 aa9.39□□□□□ -0.91
SMNDC1-205ENST00000477763 AAASQ9NRG9 546 aa9.39□□□□□ -0.91
SMNDC1-205ENST00000477763 SIAH2O43255 324 aa9.38□□□□□ -0.91
SMNDC1-205ENST00000477763 UBTFP17480 764 aaKnown RBP9.38□□□□□ -0.91
SMNDC1-205ENST00000477763 TRMT44Q8IYL2 757 aaKnown RBP9.38□□□□□ -0.91
SMNDC1-205ENST00000477763 TOR4AQ9NXH8 423 aa9.38□□□□□ -0.91
SMNDC1-205ENST00000477763 COG6Q9Y2V7 657 aa9.38□□□□□ -0.91
SMNDC1-205ENST00000477763 ZBBXA8MT70 800 aa9.37□□□□□ -0.91
SMNDC1-205ENST00000477763 SNIP1Q8TAD8 396 aaKnown RBP9.37□□□□□ -0.91
SMNDC1-205ENST00000477763 OCSTAMPQ9BR26 566 aa9.37□□□□□ -0.91
SMNDC1-205ENST00000477763 GDPD2Q9HCC8 539 aa9.37□□□□□ -0.91
SMNDC1-205ENST00000477763 RAD21O60216 631 aa9.36□□□□□ -0.91
SMNDC1-205ENST00000477763 ZBTB33Q86T24 672 aa9.36□□□□□ -0.91
SMNDC1-205ENST00000477763 C14orf37Q86TY3 774 aa9.36□□□□□ -0.91
SMNDC1-205ENST00000477763 CYP4X1Q8N118 509 aa9.36□□□□□ -0.91
SMNDC1-205ENST00000477763 MAGEB6P1A0A0J9YX57 407 aa9.35□□□□□ -0.91
SMNDC1-205ENST00000477763 NR1H3Q13133 447 aa9.35□□□□□ -0.91
SMNDC1-205ENST00000477763 ERFEQ4G0M1 354 aa9.35□□□□□ -0.91
SMNDC1-205ENST00000477763 CDK15Q96Q40 435 aa9.35□□□□□ -0.91
SMNDC1-205ENST00000477763 TIMELESSQ9UNS1 1208 aa9.35□□□□□ -0.91
SMNDC1-205ENST00000477763 FBXO45P0C2W1 286 aa9.34□□□□□ -0.91
SMNDC1-205ENST00000477763 IRF5Q13568 498 aa9.34□□□□□ -0.91
SMNDC1-205ENST00000477763 ADAM32Q8TC27 787 aa9.34□□□□□ -0.91
SMNDC1-205ENST00000477763 CARD14Q9BXL6 1004 aa9.34□□□□□ -0.91
SMNDC1-205ENST00000477763 DACH1Q9UI36 760 aa9.34□□□□□ -0.91
SMNDC1-205ENST00000477763 MAP4K5Q9Y4K4 846 aa9.34□□□□□ -0.91
SMNDC1-205ENST00000477763 TTC24A2A3L6 582 aaPredicted RBP9.33□□□□□ -0.92
SMNDC1-205ENST00000477763 AVPP01185 164 aa9.33□□□□□ -0.92
SMNDC1-205ENST00000477763 ABL2P42684 1182 aa9.33□□□□□ -0.92
SMNDC1-205ENST00000477763 WASHC4Q2M389 1173 aa9.33□□□□□ -0.92
SMNDC1-205ENST00000477763 ZNF592Q92610 1267 aa9.33□□□□□ -0.92
SMNDC1-205ENST00000477763 CDV3Q9UKY7 258 aaKnown RBP9.33□□□□□ -0.92
SMNDC1-205ENST00000477763 ZNF330Q9Y3S2 320 aaPredicted RBP9.33□□□□□ -0.92
SMNDC1-205ENST00000477763 MCCD1P59942 119 aaPredicted RBP9.32□□□□□ -0.92
SMNDC1-205ENST00000477763 WWC1Q8IX03 1113 aa9.32□□□□□ -0.92
SMNDC1-205ENST00000477763 CRIPAKQ8N1N5 446 aa9.32□□□□□ -0.92
SMNDC1-205ENST00000477763 POM121Q96HA1 1249 aa9.32□□□□□ -0.92
SMNDC1-205ENST00000477763 SLC10A4Q96EP9 437 aa9.31□□□□□ -0.92
SMNDC1-205ENST00000477763 TLL2Q9Y6L7 1015 aa9.31□□□□□ -0.92
SMNDC1-205ENST00000477763 A6NJR5 290 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms