RNA–Protein interactions for RNA: ENST00000477741.5

NELFCD-205, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 1 (best)

Gene NELFCD, Length 2,070 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-205ENST00000477741 FOXO3O43524 673 aa19.4■□□□□ 0.7
NELFCD-205ENST00000477741 DDX17Q92841 729 aaKnown RBP19.39■□□□□ 0.69
NELFCD-205ENST00000477741 AKAP12Q02952 1782 aa19.39■□□□□ 0.69
NELFCD-205ENST00000477741 CADPS2Q86UW7 1296 aa19.39■□□□□ 0.69
NELFCD-205ENST00000477741 NLRP13Q86W25 1043 aa19.38■□□□□ 0.69
NELFCD-205ENST00000477741 SSH2Q76I76 1423 aa19.38■□□□□ 0.69
NELFCD-205ENST00000477741 ITSN1Q15811 1721 aa19.38■□□□□ 0.69
NELFCD-205ENST00000477741 MON2Q7Z3U7 1717 aa19.38■□□□□ 0.69
NELFCD-205ENST00000477741 DCCP43146 1447 aa19.37■□□□□ 0.69
NELFCD-205ENST00000477741 FAM9BQ8IZU0 186 aa19.36■□□□□ 0.69
NELFCD-205ENST00000477741 LTBP4Q8N2S1 1624 aa19.36■□□□□ 0.69
NELFCD-205ENST00000477741 NUTM2GQ5VZR2 741 aa19.36■□□□□ 0.69
NELFCD-205ENST00000477741 NSD2O96028 1365 aa19.36■□□□□ 0.69
NELFCD-205ENST00000477741 NRKQ7Z2Y5 1582 aa19.35■□□□□ 0.69
NELFCD-205ENST00000477741 PAK3O75914 559 aaPredicted RBP19.34■□□□□ 0.69
NELFCD-205ENST00000477741 BRD4O60885 1362 aaPredicted RBP19.34■□□□□ 0.69
NELFCD-205ENST00000477741 PSME1Q06323 249 aa19.34■□□□□ 0.69
NELFCD-205ENST00000477741 SLAIN2Q9P270 581 aa19.32■□□□□ 0.68
NELFCD-205ENST00000477741 PNISRQ8TF01 805 aaKnown RBP19.31■□□□□ 0.68
NELFCD-205ENST00000477741 SOX12O15370 315 aa19.31■□□□□ 0.68
NELFCD-205ENST00000477741 MTHFSP49914 203 aa19.31■□□□□ 0.68
NELFCD-205ENST00000477741 BRINP3Q76B58 766 aa19.31■□□□□ 0.68
NELFCD-205ENST00000477741 COG3Q96JB2 828 aa19.31■□□□□ 0.68
NELFCD-205ENST00000477741 KIF20BQ96Q89 1820 aa19.3■□□□□ 0.68
NELFCD-205ENST00000477741 SENP3-EIF4A1A0A087X0R7 540 aa19.3■□□□□ 0.68
NELFCD-205ENST00000477741 PLEKHG5O94827 1062 aa19.29■□□□□ 0.68
NELFCD-205ENST00000477741 ABTB2Q8N961 1025 aa19.29■□□□□ 0.68
NELFCD-205ENST00000477741 KRT28Q7Z3Y7 464 aa19.28■□□□□ 0.68
NELFCD-205ENST00000477741 TTC21AQ8NDW8 1320 aa19.28■□□□□ 0.68
NELFCD-205ENST00000477741 RRS1Q15050 365 aaKnown RBP19.28■□□□□ 0.68
NELFCD-205ENST00000477741 OVOS2A0A0J9YW53 1432 aa19.28■□□□□ 0.68
NELFCD-205ENST00000477741 OVOS2Q6IE36 1432 aa19.28■□□□□ 0.68
NELFCD-205ENST00000477741 NLRP6P59044 892 aa19.27■□□□□ 0.68
NELFCD-205ENST00000477741 PIK3C2AO00443 1686 aa19.27■□□□□ 0.67
NELFCD-205ENST00000477741 EMILIN1Q9Y6C2 1016 aa19.26■□□□□ 0.67
NELFCD-205ENST00000477741 POLKQ9UBT6 870 aa19.26■□□□□ 0.67
NELFCD-205ENST00000477741 ANKRD26Q9UPS8 1709 aa19.26■□□□□ 0.67
NELFCD-205ENST00000477741 PPM1GO15355 546 aaPredicted RBP19.25■□□□□ 0.67
NELFCD-205ENST00000477741 LMOD2Q6P5Q4 547 aa19.25■□□□□ 0.67
NELFCD-205ENST00000477741 USP31Q70CQ4 1352 aa19.22■□□□□ 0.67
NELFCD-205ENST00000477741 KIF1AQ12756 1690 aa19.22■□□□□ 0.67
NELFCD-205ENST00000477741 NPHP3Q7Z494 1330 aa19.21■□□□□ 0.67
NELFCD-205ENST00000477741 ADAMTS8Q9UP79 889 aa19.21■□□□□ 0.67
NELFCD-205ENST00000477741 SCAF1Q9H7N4 1312 aaKnown RBP19.2■□□□□ 0.66
NELFCD-205ENST00000477741 PXDNQ92626 1479 aa19.19■□□□□ 0.66
NELFCD-205ENST00000477741 TRPM3Q9HCF6 1732 aaPredicted RBP19.19■□□□□ 0.66
NELFCD-205ENST00000477741 AATKQ6ZMQ8 1374 aa19.18■□□□□ 0.66
NELFCD-205ENST00000477741 HNRNPUQ00839 825 aaKnown RBP eCLIP19.18■□□□□ 0.66
NELFCD-205ENST00000477741 MARF1Q9Y4F3 1742 aaKnown RBP19.18■□□□□ 0.66
NELFCD-205ENST00000477741 MAP3K19Q56UN5 1328 aa19.16■□□□□ 0.66
NELFCD-205ENST00000477741 CABLES1Q8TDN4 633 aa19.16■□□□□ 0.66
NELFCD-205ENST00000477741 COL3A1P02461 1466 aaPredicted RBP19.16■□□□□ 0.66
NELFCD-205ENST00000477741 WDR43Q15061 677 aaKnown RBP eCLIP19.15■□□□□ 0.66
NELFCD-205ENST00000477741 PNPLA6Q8IY17 1366 aa19.15■□□□□ 0.66
NELFCD-205ENST00000477741 CFAP53Q96M91 514 aa19.15■□□□□ 0.66
NELFCD-205ENST00000477741 MAP2P11137 1827 aaKnown RBP19.15■□□□□ 0.66
NELFCD-205ENST00000477741 SOS2Q07890 1332 aaPredicted RBP19.15■□□□□ 0.66
NELFCD-205ENST00000477741 PIP4K2BP78356 416 aa19.14■□□□□ 0.65
NELFCD-205ENST00000477741 HSP90AB2PQ58FF8 381 aa19.14■□□□□ 0.65
NELFCD-205ENST00000477741 SPATA31A3Q5VYP0 1347 aa19.14■□□□□ 0.65
NELFCD-205ENST00000477741 CCDC146Q8IYE0 955 aa19.13■□□□□ 0.65
NELFCD-205ENST00000477741 SBNO1A3KN83 1393 aa19.13■□□□□ 0.65
NELFCD-205ENST00000477741 SMG6Q86US8 1419 aaKnown RBP19.13■□□□□ 0.65
NELFCD-205ENST00000477741 TNS3Q68CZ2 1445 aa19.13■□□□□ 0.65
NELFCD-205ENST00000477741 SHPRHQ149N8 1683 aa19.13■□□□□ 0.65
NELFCD-205ENST00000477741 ZBTB7CA1YPR0 619 aa19.12■□□□□ 0.65
NELFCD-205ENST00000477741 GCP02774 474 aa19.12■□□□□ 0.65
NELFCD-205ENST00000477741 ALS2Q96Q42 1657 aa19.12■□□□□ 0.65
NELFCD-205ENST00000477741 PEAK1Q9H792 1746 aa19.12■□□□□ 0.65
NELFCD-205ENST00000477741 ROBO1Q9Y6N7 1651 aa19.11■□□□□ 0.65
NELFCD-205ENST00000477741 U2SURPO15042 1029 aaKnown RBP19.11■□□□□ 0.65
NELFCD-205ENST00000477741 DIAPH1O60610 1272 aaKnown RBP19.11■□□□□ 0.65
NELFCD-205ENST00000477741 SALL2Q9Y467 1007 aaPredicted RBP19.11■□□□□ 0.65
NELFCD-205ENST00000477741 USP19O94966 1318 aa19.1■□□□□ 0.65
NELFCD-205ENST00000477741 MED1Q15648 1581 aaPredicted RBP19.1■□□□□ 0.65
NELFCD-205ENST00000477741 UBAP1LF5GYI3 381 aa19.1■□□□□ 0.65
NELFCD-205ENST00000477741 CDK12Q9NYV4 1490 aaPredicted RBP19.09■□□□□ 0.65
NELFCD-205ENST00000477741 USP54Q70EL1 1684 aa19.09■□□□□ 0.65
NELFCD-205ENST00000477741 U2AF1L5P0DN76 240 aaPredicted RBP19.09■□□□□ 0.65
NELFCD-205ENST00000477741 U2AF1Q01081 240 aaKnown RBP eCLIP19.09■□□□□ 0.653e-8■□□□□ 9.2
NELFCD-205ENST00000477741 NFAT5O94916 1531 aa19.09■□□□□ 0.65
NELFCD-205ENST00000477741 INSRP06213 1382 aa19.09■□□□□ 0.65
NELFCD-205ENST00000477741 IL13P35225 146 aa19.09■□□□□ 0.65
NELFCD-205ENST00000477741 AMPHP49418 695 aa19.09■□□□□ 0.65
NELFCD-205ENST00000477741 TOM1O60784 492 aa19.08■□□□□ 0.64
NELFCD-205ENST00000477741 ZC3H6P61129 1189 aaKnown RBP19.08■□□□□ 0.64
NELFCD-205ENST00000477741 CERKQ8TCT0 537 aa19.08■□□□□ 0.64
NELFCD-205ENST00000477741 EIF4A2Q14240 407 aaKnown RBP19.07■□□□□ 0.64
NELFCD-205ENST00000477741 BLMP54132 1417 aaPredicted RBP19.07■□□□□ 0.64
NELFCD-205ENST00000477741 SLIT3O75094 1523 aa19.07■□□□□ 0.64
NELFCD-205ENST00000477741 NHSL1Q5SYE7 1610 aa19.07■□□□□ 0.64
NELFCD-205ENST00000477741 HOXC9P31274 260 aa19.06■□□□□ 0.64
NELFCD-205ENST00000477741 KCNH5Q8NCM2 988 aa19.06■□□□□ 0.64
NELFCD-205ENST00000477741 HMOX1P09601 288 aa19.05■□□□□ 0.64
NELFCD-205ENST00000477741 ARHGEF25Q86VW2 580 aa19.05■□□□□ 0.64
NELFCD-205ENST00000477741 FLT4P35916 1363 aa19.05■□□□□ 0.64
NELFCD-205ENST00000477741 LTV1Q96GA3 475 aaPredicted RBP19.04■□□□□ 0.64
NELFCD-205ENST00000477741 NUDCQ9Y266 331 aa19.04■□□□□ 0.64
NELFCD-205ENST00000477741 ARHGEF10O15013 1369 aa19.04■□□□□ 0.64
NELFCD-205ENST00000477741 AXIN2Q9Y2T1 843 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms