RNA–Protein interactions for RNA: ENST00000477531.3

CLDN11-204, Transcript of claudin 11, humanhuman

TSL 3

Gene CLDN11, Length 1,065 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-204ENST00000477531 ALS2Q96Q42 1657 aa22.48■■□□□ 1.19
CLDN11-204ENST00000477531 ROCK2O75116 1388 aaKnown RBP22.48■■□□□ 1.19
CLDN11-204ENST00000477531 TRIM26Q12899 539 aaPredicted RBP22.47■■□□□ 1.19
CLDN11-204ENST00000477531 POLR3AO14802 1390 aaPredicted RBP22.47■■□□□ 1.19
CLDN11-204ENST00000477531 ABCA3Q99758 1704 aa22.46■■□□□ 1.19
CLDN11-204ENST00000477531 CABP2Q9NPB3 220 aa22.46■■□□□ 1.19
CLDN11-204ENST00000477531 BTG4Q9NY30 223 aa22.46■■□□□ 1.19
CLDN11-204ENST00000477531 NWD2Q9ULI1 1742 aa22.45■■□□□ 1.18
CLDN11-204ENST00000477531 EVC2Q86UK5 1308 aa22.44■■□□□ 1.18
CLDN11-204ENST00000477531 PRDM11Q9NQV5 511 aa22.44■■□□□ 1.18
CLDN11-204ENST00000477531 PPIP5K1Q6PFW1 1433 aa22.43■■□□□ 1.18
CLDN11-204ENST00000477531 PLCH1Q4KWH8 1693 aa22.42■■□□□ 1.18
CLDN11-204ENST00000477531 NUTM2GQ5VZR2 741 aa22.42■■□□□ 1.18
CLDN11-204ENST00000477531 SEPT12Q8IYM1 358 aa22.42■■□□□ 1.18
CLDN11-204ENST00000477531 ABTB2Q8N961 1025 aa22.42■■□□□ 1.18
CLDN11-204ENST00000477531 TRPM1Q7Z4N2 1603 aa22.42■■□□□ 1.18
CLDN11-204ENST00000477531 GLI3P10071 1580 aa22.42■■□□□ 1.18
CLDN11-204ENST00000477531 A0A0G2JS52 829 aa22.41■■□□□ 1.18
CLDN11-204ENST00000477531 MYT1Q01538 1121 aa22.41■■□□□ 1.18
CLDN11-204ENST00000477531 CCDC125Q86Z20 511 aa22.41■■□□□ 1.18
CLDN11-204ENST00000477531 TOPAZ1Q8N9V7 1692 aa22.41■■□□□ 1.18
CLDN11-204ENST00000477531 QRICH2Q9H0J4 1663 aa22.41■■□□□ 1.18
CLDN11-204ENST00000477531 TONSLQ96HA7 1378 aa22.4■■□□□ 1.18
CLDN11-204ENST00000477531 COL14A1Q05707 1796 aaKnown RBP22.4■■□□□ 1.18
CLDN11-204ENST00000477531 CABP1Q9NZU7 370 aa22.39■■□□□ 1.17
CLDN11-204ENST00000477531 ONECUT3O60422 494 aaPredicted RBP22.38■■□□□ 1.17
CLDN11-204ENST00000477531 BRD4O60885 1362 aaPredicted RBP22.38■■□□□ 1.17
CLDN11-204ENST00000477531 ZC3H6P61129 1189 aaKnown RBP22.37■■□□□ 1.17
CLDN11-204ENST00000477531 NLRP13Q86W25 1043 aa22.37■■□□□ 1.17
CLDN11-204ENST00000477531 KIAA0232Q92628 1395 aa22.37■■□□□ 1.17
CLDN11-204ENST00000477531 CARD11Q9BXL7 1154 aa22.36■■□□□ 1.17
CLDN11-204ENST00000477531 CHRNA2Q15822 529 aa22.35■■□□□ 1.17
CLDN11-204ENST00000477531 FAM98CQ17RN3 349 aaKnown RBP22.35■■□□□ 1.17
CLDN11-204ENST00000477531 KRT27Q7Z3Y8 459 aa22.34■■□□□ 1.17
CLDN11-204ENST00000477531 EP400Q96L91 3159 aa22.34■■□□□ 1.17
CLDN11-204ENST00000477531 EVA1CP58658 441 aa22.33■■□□□ 1.17
CLDN11-204ENST00000477531 SF3B2Q13435 895 aaKnown RBP22.33■■□□□ 1.17
CLDN11-204ENST00000477531 CRYBG1Q9Y4K1 1723 aa22.33■■□□□ 1.17
CLDN11-204ENST00000477531 SPATA31A5Q5VU36 1347 aa22.32■■□□□ 1.16
CLDN11-204ENST00000477531 SPATA31A7Q8IWB4 1347 aa22.32■■□□□ 1.16
CLDN11-204ENST00000477531 NRAPQ86VF7 1730 aa22.32■■□□□ 1.16
CLDN11-204ENST00000477531 ZNF692Q9BU19 519 aaPredicted RBP22.32■■□□□ 1.16
CLDN11-204ENST00000477531 STRN4Q9NRL3 753 aa22.32■■□□□ 1.16
CLDN11-204ENST00000477531 GCP02774 474 aa22.3■■□□□ 1.16
CLDN11-204ENST00000477531 NLRP6P59044 892 aa22.3■■□□□ 1.16
CLDN11-204ENST00000477531 PHRF1Q9P1Y6 1649 aaKnown RBP22.3■■□□□ 1.16
CLDN11-204ENST00000477531 USP6P35125 1406 aa22.3■■□□□ 1.16
CLDN11-204ENST00000477531 USP19O94966 1318 aa22.3■■□□□ 1.16
CLDN11-204ENST00000477531 BLMP54132 1417 aaPredicted RBP22.29■■□□□ 1.16
CLDN11-204ENST00000477531 BRWD3Q6RI45 1802 aa22.28■■□□□ 1.16
CLDN11-204ENST00000477531 CPDO75976 1380 aa22.27■■□□□ 1.16
CLDN11-204ENST00000477531 ZRANB1Q9UGI0 708 aa22.26■■□□□ 1.15
CLDN11-204ENST00000477531 SPATA31A1Q5TZJ5 1347 aa22.26■■□□□ 1.15
CLDN11-204ENST00000477531 ZBTB7CA1YPR0 619 aa22.25■■□□□ 1.15
CLDN11-204ENST00000477531 SBNO2Q9Y2G9 1366 aa22.25■■□□□ 1.15
CLDN11-204ENST00000477531 NRKQ7Z2Y5 1582 aa22.24■■□□□ 1.15
CLDN11-204ENST00000477531 USP35Q9P2H5 1018 aa22.23■■□□□ 1.15
CLDN11-204ENST00000477531 TTC21BQ7Z4L5 1316 aa22.23■■□□□ 1.15
CLDN11-204ENST00000477531 TTC21AQ8NDW8 1320 aa22.22■■□□□ 1.15
CLDN11-204ENST00000477531 SSH2Q76I76 1423 aa22.22■■□□□ 1.15
CLDN11-204ENST00000477531 TMC1Q8TDI8 760 aa22.21■■□□□ 1.15
CLDN11-204ENST00000477531 KTN1Q86UP2 1357 aaKnown RBP22.21■■□□□ 1.15
CLDN11-204ENST00000477531 LARP1Q6PKG0 1096 aaKnown RBP22.2■■□□□ 1.14
CLDN11-204ENST00000477531 KCNH5Q8NCM2 988 aa22.2■■□□□ 1.14
CLDN11-204ENST00000477531 SLC24A1O60721 1099 aa22.19■■□□□ 1.14
CLDN11-204ENST00000477531 DEFB132Q7Z7B7 95 aa22.19■■□□□ 1.14
CLDN11-204ENST00000477531 TCP11L2Q8N4U5 519 aa22.19■■□□□ 1.14
CLDN11-204ENST00000477531 CAMTA1Q9Y6Y1 1673 aa22.18■■□□□ 1.14
CLDN11-204ENST00000477531 BAG6P46379 1132 aa22.18■■□□□ 1.14
CLDN11-204ENST00000477531 BARGINQ6ZT62 677 aa22.18■■□□□ 1.14
CLDN11-204ENST00000477531 PDE3BQ13370 1112 aa22.17■■□□□ 1.14
CLDN11-204ENST00000477531 HDGFL2Q7Z4V5 671 aaPredicted RBP22.17■■□□□ 1.14
CLDN11-204ENST00000477531 THRAP3Q9Y2W1 955 aaKnown RBP22.17■■□□□ 1.14
CLDN11-204ENST00000477531 CPSF1Q10570 1443 aaKnown RBP22.16■■□□□ 1.14
CLDN11-204ENST00000477531 AATKQ6ZMQ8 1374 aa22.16■■□□□ 1.14
CLDN11-204ENST00000477531 SLIT3O75094 1523 aa22.16■■□□□ 1.14
CLDN11-204ENST00000477531 THSD7AQ9UPZ6 1657 aa22.15■■□□□ 1.14
CLDN11-204ENST00000477531 FAM182BQ5T319 152 aa22.15■■□□□ 1.14
CLDN11-204ENST00000477531 PUS7Q96PZ0 661 aaKnown RBP22.15■■□□□ 1.14
CLDN11-204ENST00000477531 AKAP12Q02952 1782 aa22.15■■□□□ 1.14
CLDN11-204ENST00000477531 SOX12O15370 315 aa22.14■■□□□ 1.13
CLDN11-204ENST00000477531 FAM196AQ6ZSG2 479 aa22.14■■□□□ 1.13
CLDN11-204ENST00000477531 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.14■■□□□ 1.13
CLDN11-204ENST00000477531 TERF2IPQ9NYB0 399 aa22.14■■□□□ 1.13
CLDN11-204ENST00000477531 PIK3C2AO00443 1686 aa22.14■■□□□ 1.13
CLDN11-204ENST00000477531 LMO7Q8WWI1 1683 aa22.14■■□□□ 1.13
CLDN11-204ENST00000477531 ST20-MTHFSA0A0A6YYL1 179 aa22.13■■□□□ 1.13
CLDN11-204ENST00000477531 COL5A2P05997 1499 aaPredicted RBP22.13■■□□□ 1.13
CLDN11-204ENST00000477531 TOM1L2Q6ZVM7 507 aa22.12■■□□□ 1.13
CLDN11-204ENST00000477531 SLC12A5Q9H2X9 1139 aa22.12■■□□□ 1.13
CLDN11-204ENST00000477531 ARHGEF25Q86VW2 580 aa22.11■■□□□ 1.13
CLDN11-204ENST00000477531 CRB1P82279 1406 aa22.11■■□□□ 1.13
CLDN11-204ENST00000477531 PCGF6Q9BYE7 350 aa22.1■■□□□ 1.13
CLDN11-204ENST00000477531 CSB-PGBD3P0DP91 1061 aa22.08■■□□□ 1.13
CLDN11-204ENST00000477531 TRIM37O94972 964 aa22.07■■□□□ 1.12
CLDN11-204ENST00000477531 TESK2Q96S53 571 aa22.07■■□□□ 1.12
CLDN11-204ENST00000477531 TIMELESSQ9UNS1 1208 aa22.07■■□□□ 1.12
CLDN11-204ENST00000477531 AXIN2Q9Y2T1 843 aa22.07■■□□□ 1.12
CLDN11-204ENST00000477531 WDR17Q8IZU2 1322 aa22.06■■□□□ 1.12
CLDN11-204ENST00000477531 MON2Q7Z3U7 1717 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms