RNA–Protein interactions for RNA: ENST00000477377.1

COMMD6-209, Transcript of COMM domain containing 6, humanhuman

TSL 3

Gene COMMD6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-209ENST00000477377 PPIP5K1Q6PFW1 1433 aa22.22■■□□□ 1.15
COMMD6-209ENST00000477377 CRYBG1Q9Y4K1 1723 aa22.21■■□□□ 1.15
COMMD6-209ENST00000477377 FAM83GA6ND36 823 aa22.21■■□□□ 1.15
COMMD6-209ENST00000477377 PLEKHG5O94827 1062 aa22.21■■□□□ 1.15
COMMD6-209ENST00000477377 RGS12O14924 1447 aa22.21■■□□□ 1.15
COMMD6-209ENST00000477377 CABP1Q9NZU7 370 aa22.2■■□□□ 1.14
COMMD6-209ENST00000477377 PAK3O75914 559 aaPredicted RBP22.19■■□□□ 1.14
COMMD6-209ENST00000477377 EVC2Q86UK5 1308 aa22.19■■□□□ 1.14
COMMD6-209ENST00000477377 SBNO2Q9Y2G9 1366 aa22.18■■□□□ 1.14
COMMD6-209ENST00000477377 UNC5CLQ8IV45 518 aa22.18■■□□□ 1.14
COMMD6-209ENST00000477377 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.17■■□□□ 1.14
COMMD6-209ENST00000477377 SSH2Q76I76 1423 aa22.15■■□□□ 1.14
COMMD6-209ENST00000477377 GJD4Q96KN9 370 aaPredicted RBP22.15■■□□□ 1.14
COMMD6-209ENST00000477377 HAP1P54257 671 aaPredicted RBP22.14■■□□□ 1.13
COMMD6-209ENST00000477377 CLSPNQ9HAW4 1339 aa22.13■■□□□ 1.13
COMMD6-209ENST00000477377 NUTM2GQ5VZR2 741 aa22.13■■□□□ 1.13
COMMD6-209ENST00000477377 GLI3P10071 1580 aa22.12■■□□□ 1.13
COMMD6-209ENST00000477377 PLCH1Q4KWH8 1693 aa22.12■■□□□ 1.13
COMMD6-209ENST00000477377 TESK2Q96S53 571 aa22.12■■□□□ 1.13
COMMD6-209ENST00000477377 USP6P35125 1406 aa22.12■■□□□ 1.13
COMMD6-209ENST00000477377 UPF1Q92900 1129 aaKnown RBP eCLIP22.11■■□□□ 1.13
COMMD6-209ENST00000477377 NWD2Q9ULI1 1742 aa22.11■■□□□ 1.13
COMMD6-209ENST00000477377 BRD4O60885 1362 aaPredicted RBP22.1■■□□□ 1.13
COMMD6-209ENST00000477377 PHRF1Q9P1Y6 1649 aaKnown RBP22.09■■□□□ 1.13
COMMD6-209ENST00000477377 USP19O94966 1318 aa22.09■■□□□ 1.13
COMMD6-209ENST00000477377 CPSF1Q10570 1443 aaKnown RBP22.09■■□□□ 1.13
COMMD6-209ENST00000477377 VPS72Q15906 364 aa22.09■■□□□ 1.13
COMMD6-209ENST00000477377 ABTB2Q8N961 1025 aa22.09■■□□□ 1.13
COMMD6-209ENST00000477377 NRAPQ86VF7 1730 aa22.09■■□□□ 1.13
COMMD6-209ENST00000477377 ST20-MTHFSA0A0A6YYL1 179 aa22.08■■□□□ 1.13
COMMD6-209ENST00000477377 TIMELESSQ9UNS1 1208 aa22.08■■□□□ 1.13
COMMD6-209ENST00000477377 ATAD2Q6PL18 1390 aa22.08■■□□□ 1.12
COMMD6-209ENST00000477377 BTG4Q9NY30 223 aa22.07■■□□□ 1.12
COMMD6-209ENST00000477377 KIAA0232Q92628 1395 aa22.07■■□□□ 1.12
COMMD6-209ENST00000477377 COL14A1Q05707 1796 aaKnown RBP22.07■■□□□ 1.12
COMMD6-209ENST00000477377 ONECUT3O60422 494 aaPredicted RBP22.06■■□□□ 1.12
COMMD6-209ENST00000477377 CD163L1Q9NR16 1453 aa22.06■■□□□ 1.12
COMMD6-209ENST00000477377 NRKQ7Z2Y5 1582 aa22.05■■□□□ 1.12
COMMD6-209ENST00000477377 ZNF692Q9BU19 519 aaPredicted RBP22.05■■□□□ 1.12
COMMD6-209ENST00000477377 AKAP12Q02952 1782 aa22.04■■□□□ 1.12
COMMD6-209ENST00000477377 ZC3H6P61129 1189 aaKnown RBP22.04■■□□□ 1.12
COMMD6-209ENST00000477377 CHRNA2Q15822 529 aa22.03■■□□□ 1.12
COMMD6-209ENST00000477377 NLRP13Q86W25 1043 aa22.03■■□□□ 1.12
COMMD6-209ENST00000477377 PUS7Q96PZ0 661 aaKnown RBP22.03■■□□□ 1.12
COMMD6-209ENST00000477377 TTC21BQ7Z4L5 1316 aa22.03■■□□□ 1.12
COMMD6-209ENST00000477377 PIK3C2AO00443 1686 aa22.02■■□□□ 1.12
COMMD6-209ENST00000477377 GCP02774 474 aa22.02■■□□□ 1.12
COMMD6-209ENST00000477377 SLC12A5Q9H2X9 1139 aa22.02■■□□□ 1.12
COMMD6-209ENST00000477377 PRDM11Q9NQV5 511 aa22.02■■□□□ 1.12
COMMD6-209ENST00000477377 CPDO75976 1380 aa22.01■■□□□ 1.11
COMMD6-209ENST00000477377 SLIT3O75094 1523 aa22■■□□□ 1.11
COMMD6-209ENST00000477377 NLRP6P59044 892 aa21.99■■□□□ 1.11
COMMD6-209ENST00000477377 USP47Q96K76 1375 aa21.99■■□□□ 1.11
COMMD6-209ENST00000477377 SEPT12Q8IYM1 358 aa21.98■■□□□ 1.11
COMMD6-209ENST00000477377 EP400Q96L91 3159 aa21.98■■□□□ 1.11
COMMD6-209ENST00000477377 SPATA31A5Q5VU36 1347 aa21.98■■□□□ 1.11
COMMD6-209ENST00000477377 SPATA31A7Q8IWB4 1347 aa21.98■■□□□ 1.11
COMMD6-209ENST00000477377 KTN1Q86UP2 1357 aaKnown RBP21.98■■□□□ 1.11
COMMD6-209ENST00000477377 LMO7Q8WWI1 1683 aa21.98■■□□□ 1.11
COMMD6-209ENST00000477377 CAMTA1Q9Y6Y1 1673 aa21.98■■□□□ 1.11
COMMD6-209ENST00000477377 MON2Q7Z3U7 1717 aa21.97■■□□□ 1.11
COMMD6-209ENST00000477377 TTC21AQ8NDW8 1320 aa21.96■■□□□ 1.11
COMMD6-209ENST00000477377 BRWD3Q6RI45 1802 aa21.95■■□□□ 1.1
COMMD6-209ENST00000477377 CCER1Q8TC90 406 aaPredicted RBP21.95■■□□□ 1.1
COMMD6-209ENST00000477377 TMC1Q8TDI8 760 aa21.95■■□□□ 1.1
COMMD6-209ENST00000477377 ZRANB1Q9UGI0 708 aa21.95■■□□□ 1.1
COMMD6-209ENST00000477377 CCDC9Q9Y3X0 531 aaKnown RBP21.95■■□□□ 1.1
COMMD6-209ENST00000477377 SPATA31A1Q5TZJ5 1347 aa21.93■■□□□ 1.1
COMMD6-209ENST00000477377 A0A1W2PP64 1363 aa21.92■■□□□ 1.1
COMMD6-209ENST00000477377 USP31Q70CQ4 1352 aa21.92■■□□□ 1.1
COMMD6-209ENST00000477377 FAM98CQ17RN3 349 aaKnown RBP21.92■■□□□ 1.1
COMMD6-209ENST00000477377 COL18A1P39060 1754 aa21.92■■□□□ 1.1
COMMD6-209ENST00000477377 STRN4Q9NRL3 753 aa21.91■■□□□ 1.1
COMMD6-209ENST00000477377 SLC24A1O60721 1099 aa21.9■■□□□ 1.1
COMMD6-209ENST00000477377 LARP1Q6PKG0 1096 aaKnown RBP21.9■■□□□ 1.1
COMMD6-209ENST00000477377 ARHGEF25Q86VW2 580 aa21.9■■□□□ 1.1
COMMD6-209ENST00000477377 NME9Q86XW9 330 aa21.9■■□□□ 1.1
COMMD6-209ENST00000477377 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.9■■□□□ 1.13e-6■■□□□ 14
COMMD6-209ENST00000477377 AXIN2Q9Y2T1 843 aa21.9■■□□□ 1.1
COMMD6-209ENST00000477377 AATKQ6ZMQ8 1374 aa21.89■■□□□ 1.1
COMMD6-209ENST00000477377 NFAT5O94916 1531 aa21.89■■□□□ 1.09
COMMD6-209ENST00000477377 USP54Q70EL1 1684 aa21.88■■□□□ 1.09
COMMD6-209ENST00000477377 THSD7AQ9UPZ6 1657 aa21.88■■□□□ 1.09
COMMD6-209ENST00000477377 HDGFL2Q7Z4V5 671 aaPredicted RBP21.88■■□□□ 1.09
COMMD6-209ENST00000477377 COL5A2P05997 1499 aaPredicted RBP21.88■■□□□ 1.09
COMMD6-209ENST00000477377 EDC4Q6P2E9 1401 aaKnown RBP21.88■■□□□ 1.09
COMMD6-209ENST00000477377 NINLQ9Y2I6 1382 aa21.87■■□□□ 1.09
COMMD6-209ENST00000477377 TMF1P82094 1093 aa21.87■■□□□ 1.09
COMMD6-209ENST00000477377 KRT27Q7Z3Y8 459 aa21.86■■□□□ 1.09
COMMD6-209ENST00000477377 KCNH5Q8NCM2 988 aa21.86■■□□□ 1.09
COMMD6-209ENST00000477377 TERF2IPQ9NYB0 399 aa21.86■■□□□ 1.09
COMMD6-209ENST00000477377 EVA1CP58658 441 aa21.85■■□□□ 1.09
COMMD6-209ENST00000477377 BARGINQ6ZT62 677 aa21.84■■□□□ 1.09
COMMD6-209ENST00000477377 OVOS2A0A0J9YW53 1432 aa21.82■■□□□ 1.08
COMMD6-209ENST00000477377 OVOS2Q6IE36 1432 aa21.82■■□□□ 1.08
COMMD6-209ENST00000477377 SOX12O15370 315 aa21.82■■□□□ 1.08
COMMD6-209ENST00000477377 USP35Q9P2H5 1018 aa21.82■■□□□ 1.08
COMMD6-209ENST00000477377 ANKRD36BQ8N2N9 1353 aa21.82■■□□□ 1.08
COMMD6-209ENST00000477377 ZBTB7CA1YPR0 619 aa21.81■■□□□ 1.08
COMMD6-209ENST00000477377 CCDC125Q86Z20 511 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms