RNA–Protein interactions for RNA: ENST00000476983.5

CLK2-205, Transcript of CDC like kinase 2, humanhuman

TSL 1 (best)

Gene CLK2, Length 1,885 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-205ENST00000476983 NME9Q86XW9 330 aa26.77■■□□□ 1.88
CLK2-205ENST00000476983 MSH6P52701 1360 aa26.77■■□□□ 1.88
CLK2-205ENST00000476983 DCCP43146 1447 aa26.76■■□□□ 1.87
CLK2-205ENST00000476983 ORAI2Q96SN7 254 aa26.75■■□□□ 1.87
CLK2-205ENST00000476983 C1orf167Q5SNV9 1468 aa26.75■■□□□ 1.87
CLK2-205ENST00000476983 TTC21BQ7Z4L5 1316 aa26.75■■□□□ 1.87
CLK2-205ENST00000476983 ZRANB1Q9UGI0 708 aa26.74■■□□□ 1.87
CLK2-205ENST00000476983 MST1RQ04912 1400 aa26.73■■□□□ 1.87
CLK2-205ENST00000476983 SSH2Q76I76 1423 aa26.72■■□□□ 1.87
CLK2-205ENST00000476983 AEBP2Q6ZN18 517 aaPredicted RBP26.7■■□□□ 1.86
CLK2-205ENST00000476983 CADPS2Q86UW7 1296 aa26.7■■□□□ 1.86
CLK2-205ENST00000476983 PNISRQ8TF01 805 aaKnown RBP26.69■■□□□ 1.86
CLK2-205ENST00000476983 KIF1AQ12756 1690 aa26.68■■□□□ 1.86
CLK2-205ENST00000476983 COG3Q96JB2 828 aa26.66■■□□□ 1.86
CLK2-205ENST00000476983 TTC21AQ8NDW8 1320 aa26.66■■□□□ 1.86
CLK2-205ENST00000476983 PIK3C2AO00443 1686 aa26.66■■□□□ 1.86
CLK2-205ENST00000476983 FOXO3O43524 673 aa26.64■■□□□ 1.85
CLK2-205ENST00000476983 PAK3O75914 559 aaPredicted RBP26.64■■□□□ 1.85
CLK2-205ENST00000476983 FBLN1P23142 703 aa26.64■■□□□ 1.85
CLK2-205ENST00000476983 MTHFSP49914 203 aa26.64■■□□□ 1.85
CLK2-205ENST00000476983 PSME1Q06323 249 aa26.64■■□□□ 1.85
CLK2-205ENST00000476983 XPCQ01831 940 aaPredicted RBP26.63■■□□□ 1.85
CLK2-205ENST00000476983 OVOS2A0A0J9YW53 1432 aa26.62■■□□□ 1.85
CLK2-205ENST00000476983 OVOS2Q6IE36 1432 aa26.62■■□□□ 1.85
CLK2-205ENST00000476983 LTBP4Q8N2S1 1624 aa26.61■■□□□ 1.85
CLK2-205ENST00000476983 MAP2P11137 1827 aaKnown RBP26.59■■□□□ 1.85
CLK2-205ENST00000476983 NUTM2GQ5VZR2 741 aa26.59■■□□□ 1.85
CLK2-205ENST00000476983 HNRNPUQ00839 825 aaKnown RBP eCLIP26.58■■□□□ 1.85
CLK2-205ENST00000476983 DDX17Q92841 729 aaKnown RBP26.57■■□□□ 1.84
CLK2-205ENST00000476983 SCAF1Q9H7N4 1312 aaKnown RBP26.57■■□□□ 1.84
CLK2-205ENST00000476983 MARF1Q9Y4F3 1742 aaKnown RBP26.57■■□□□ 1.84
CLK2-205ENST00000476983 ABTB2Q8N961 1025 aa26.56■■□□□ 1.84
CLK2-205ENST00000476983 TRPM3Q9HCF6 1732 aaPredicted RBP26.56■■□□□ 1.84
CLK2-205ENST00000476983 SOX12O15370 315 aa26.55■■□□□ 1.84
CLK2-205ENST00000476983 WDR43Q15061 677 aaKnown RBP eCLIP26.55■■□□□ 1.84
CLK2-205ENST00000476983 SHPRHQ149N8 1683 aa26.55■■□□□ 1.84
CLK2-205ENST00000476983 NLRP6P59044 892 aa26.55■■□□□ 1.84
CLK2-205ENST00000476983 KRT28Q7Z3Y7 464 aa26.55■■□□□ 1.84
CLK2-205ENST00000476983 CFAP53Q96M91 514 aa26.55■■□□□ 1.84
CLK2-205ENST00000476983 USP31Q70CQ4 1352 aa26.55■■□□□ 1.84
CLK2-205ENST00000476983 SLAIN2Q9P270 581 aa26.54■■□□□ 1.84
CLK2-205ENST00000476983 PPM1GO15355 546 aaPredicted RBP26.53■■□□□ 1.84
CLK2-205ENST00000476983 RRS1Q15050 365 aaKnown RBP26.53■■□□□ 1.84
CLK2-205ENST00000476983 POLKQ9UBT6 870 aa26.53■■□□□ 1.84
CLK2-205ENST00000476983 EMILIN1Q9Y6C2 1016 aa26.53■■□□□ 1.84
CLK2-205ENST00000476983 USP54Q70EL1 1684 aa26.53■■□□□ 1.84
CLK2-205ENST00000476983 AATKQ6ZMQ8 1374 aa26.53■■□□□ 1.84
CLK2-205ENST00000476983 SENP3-EIF4A1A0A087X0R7 540 aa26.53■■□□□ 1.84
CLK2-205ENST00000476983 BRINP3Q76B58 766 aa26.53■■□□□ 1.84
CLK2-205ENST00000476983 CENPBP07199 599 aaPredicted RBP26.51■■□□□ 1.83
CLK2-205ENST00000476983 ADAMTS8Q9UP79 889 aa26.51■■□□□ 1.83
CLK2-205ENST00000476983 COL3A1P02461 1466 aaPredicted RBP26.5■■□□□ 1.83
CLK2-205ENST00000476983 LMOD2Q6P5Q4 547 aa26.49■■□□□ 1.83
CLK2-205ENST00000476983 SMG6Q86US8 1419 aaKnown RBP26.48■■□□□ 1.83
CLK2-205ENST00000476983 NPHP3Q7Z494 1330 aa26.48■■□□□ 1.83
CLK2-205ENST00000476983 PLEKHG5O94827 1062 aa26.47■■□□□ 1.83
CLK2-205ENST00000476983 BLMP54132 1417 aaPredicted RBP26.46■■□□□ 1.83
CLK2-205ENST00000476983 ALS2Q96Q42 1657 aa26.46■■□□□ 1.83
CLK2-205ENST00000476983 PXDNQ92626 1479 aa26.45■■□□□ 1.82
CLK2-205ENST00000476983 CDK12Q9NYV4 1490 aaPredicted RBP26.45■■□□□ 1.82
CLK2-205ENST00000476983 PNPLA6Q8IY17 1366 aa26.45■■□□□ 1.82
CLK2-205ENST00000476983 PEAK1Q9H792 1746 aa26.44■■□□□ 1.82
CLK2-205ENST00000476983 DIAPH1O60610 1272 aaKnown RBP26.41■■□□□ 1.82
CLK2-205ENST00000476983 CCDC146Q8IYE0 955 aa26.4■■□□□ 1.82
CLK2-205ENST00000476983 MAP3K19Q56UN5 1328 aa26.4■■□□□ 1.82
CLK2-205ENST00000476983 SBNO1A3KN83 1393 aa26.4■■□□□ 1.82
CLK2-205ENST00000476983 INSRP06213 1382 aa26.4■■□□□ 1.82
CLK2-205ENST00000476983 U2SURPO15042 1029 aaKnown RBP26.4■■□□□ 1.82
CLK2-205ENST00000476983 TNS3Q68CZ2 1445 aa26.39■■□□□ 1.82
CLK2-205ENST00000476983 NHSL1Q5SYE7 1610 aa26.38■■□□□ 1.81
CLK2-205ENST00000476983 U2AF1L5P0DN76 240 aaPredicted RBP26.38■■□□□ 1.81
CLK2-205ENST00000476983 U2AF1Q01081 240 aaKnown RBP eCLIP26.38■■□□□ 1.81
CLK2-205ENST00000476983 NUDCQ9Y266 331 aa26.38■■□□□ 1.81
CLK2-205ENST00000476983 LTN1O94822 1766 aa26.38■■□□□ 1.81
CLK2-205ENST00000476983 NFAT5O94916 1531 aa26.37■■□□□ 1.81
CLK2-205ENST00000476983 ROBO1Q9Y6N7 1651 aa26.37■■□□□ 1.81
CLK2-205ENST00000476983 SLIT3O75094 1523 aa26.37■■□□□ 1.81
CLK2-205ENST00000476983 SALL2Q9Y467 1007 aaPredicted RBP26.36■■□□□ 1.81
CLK2-205ENST00000476983 ZBED9Q6R2W3 1325 aa26.36■■□□□ 1.81
CLK2-205ENST00000476983 SPATA31A3Q5VYP0 1347 aa26.35■■□□□ 1.81
CLK2-205ENST00000476983 MED1Q15648 1581 aaPredicted RBP26.35■■□□□ 1.81
CLK2-205ENST00000476983 USP19O94966 1318 aa26.34■■□□□ 1.81
CLK2-205ENST00000476983 AMPHP49418 695 aa26.34■■□□□ 1.81
CLK2-205ENST00000476983 SOS2Q07890 1332 aaPredicted RBP26.34■■□□□ 1.81
CLK2-205ENST00000476983 ZBTB7CA1YPR0 619 aa26.34■■□□□ 1.81
CLK2-205ENST00000476983 HSP90AB2PQ58FF8 381 aa26.34■■□□□ 1.81
CLK2-205ENST00000476983 KCNH5Q8NCM2 988 aa26.33■■□□□ 1.81
CLK2-205ENST00000476983 FLT4P35916 1363 aa26.33■■□□□ 1.8
CLK2-205ENST00000476983 IL13P35225 146 aa26.32■■□□□ 1.8
CLK2-205ENST00000476983 GCP02774 474 aa26.32■■□□□ 1.8
CLK2-205ENST00000476983 PHRF1Q9P1Y6 1649 aaKnown RBP26.31■■□□□ 1.8
CLK2-205ENST00000476983 EIF4A2Q14240 407 aaKnown RBP26.3■■□□□ 1.8
CLK2-205ENST00000476983 ARHGEF10O15013 1369 aa26.29■■□□□ 1.8
CLK2-205ENST00000476983 CRYBG1Q9Y4K1 1723 aa26.29■■□□□ 1.8
CLK2-205ENST00000476983 HOXC9P31274 260 aa26.28■■□□□ 1.8
CLK2-205ENST00000476983 CABLES1Q8TDN4 633 aa26.28■■□□□ 1.8
CLK2-205ENST00000476983 APAF1O14727 1248 aa26.27■■□□□ 1.8
CLK2-205ENST00000476983 RUNDC1Q96C34 613 aa26.27■■□□□ 1.8
CLK2-205ENST00000476983 HMOX1P09601 288 aa26.25■■□□□ 1.79
CLK2-205ENST00000476983 RTL1A6NKG5 1358 aa26.25■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms