RNA–Protein interactions for RNA: ENST00000476683.1

SCN5A-212, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

TSL 3

Gene SCN5A, Length 774 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-212ENST00000476683 PUS7Q96PZ0 661 aaKnown RBP22.88■■□□□ 1.25
SCN5A-212ENST00000476683 USP47Q96K76 1375 aa22.88■■□□□ 1.25
SCN5A-212ENST00000476683 BRD4O60885 1362 aaPredicted RBP22.87■■□□□ 1.25
SCN5A-212ENST00000476683 SOCS7O14512 581 aa22.86■■□□□ 1.25
SCN5A-212ENST00000476683 MARF1Q9Y4F3 1742 aaKnown RBP22.85■■□□□ 1.25
SCN5A-212ENST00000476683 HAP1P54257 671 aaPredicted RBP22.85■■□□□ 1.25
SCN5A-212ENST00000476683 USP6P35125 1406 aa22.84■■□□□ 1.25
SCN5A-212ENST00000476683 PLEKHG5O94827 1062 aa22.84■■□□□ 1.25
SCN5A-212ENST00000476683 ZNF692Q9BU19 519 aaPredicted RBP22.84■■□□□ 1.25
SCN5A-212ENST00000476683 QTRT2Q9H974 415 aaKnown RBP22.84■■□□□ 1.25
SCN5A-212ENST00000476683 ABCA3Q99758 1704 aa22.83■■□□□ 1.25
SCN5A-212ENST00000476683 USP21Q9UK80 565 aa22.83■■□□□ 1.25
SCN5A-212ENST00000476683 SSH2Q76I76 1423 aa22.82■■□□□ 1.24
SCN5A-212ENST00000476683 CPSF1Q10570 1443 aaKnown RBP22.82■■□□□ 1.24
SCN5A-212ENST00000476683 BCL9LQ86UU0 1499 aa22.81■■□□□ 1.24
SCN5A-212ENST00000476683 RXRBP28702 533 aa22.81■■□□□ 1.24
SCN5A-212ENST00000476683 ABTB2Q8N961 1025 aa22.81■■□□□ 1.24
SCN5A-212ENST00000476683 SLIT2O94813 1529 aa22.8■■□□□ 1.24
SCN5A-212ENST00000476683 FAM83GA6ND36 823 aa22.79■■□□□ 1.24
SCN5A-212ENST00000476683 NUTM2GQ5VZR2 741 aa22.79■■□□□ 1.24
SCN5A-212ENST00000476683 CRYBG1Q9Y4K1 1723 aa22.79■■□□□ 1.24
SCN5A-212ENST00000476683 SLC12A5Q9H2X9 1139 aa22.78■■□□□ 1.24
SCN5A-212ENST00000476683 TRPC5Q9UL62 973 aaPredicted RBP22.78■■□□□ 1.24
SCN5A-212ENST00000476683 RBM6P78332 1123 aaKnown RBP22.77■■□□□ 1.24
SCN5A-212ENST00000476683 TMF1P82094 1093 aa22.77■■□□□ 1.24
SCN5A-212ENST00000476683 NLRP13Q86W25 1043 aa22.77■■□□□ 1.24
SCN5A-212ENST00000476683 AKAP12Q02952 1782 aa22.76■■□□□ 1.23
SCN5A-212ENST00000476683 ATRNO75882 1429 aa22.76■■□□□ 1.23
SCN5A-212ENST00000476683 UNC5CLQ8IV45 518 aa22.76■■□□□ 1.23
SCN5A-212ENST00000476683 TMC1Q8TDI8 760 aa22.76■■□□□ 1.23
SCN5A-212ENST00000476683 CD163L1Q9NR16 1453 aa22.76■■□□□ 1.23
SCN5A-212ENST00000476683 USP19O94966 1318 aa22.76■■□□□ 1.23
SCN5A-212ENST00000476683 TTC21BQ7Z4L5 1316 aa22.76■■□□□ 1.23
SCN5A-212ENST00000476683 KTN1Q86UP2 1357 aaKnown RBP22.76■■□□□ 1.23
SCN5A-212ENST00000476683 CDK12Q9NYV4 1490 aaPredicted RBP22.73■■□□□ 1.23
SCN5A-212ENST00000476683 TTC21AQ8NDW8 1320 aa22.73■■□□□ 1.23
SCN5A-212ENST00000476683 NINLQ9Y2I6 1382 aa22.73■■□□□ 1.23
SCN5A-212ENST00000476683 PHRF1Q9P1Y6 1649 aaKnown RBP22.72■■□□□ 1.23
SCN5A-212ENST00000476683 NLRP6P59044 892 aa22.72■■□□□ 1.23
SCN5A-212ENST00000476683 TERF2IPQ9NYB0 399 aa22.72■■□□□ 1.23
SCN5A-212ENST00000476683 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.71■■□□□ 1.23
SCN5A-212ENST00000476683 GCP02774 474 aa22.71■■□□□ 1.23
SCN5A-212ENST00000476683 CDCA8Q53HL2 280 aa22.71■■□□□ 1.23
SCN5A-212ENST00000476683 HDGFL2Q7Z4V5 671 aaPredicted RBP22.71■■□□□ 1.23
SCN5A-212ENST00000476683 PRDM11Q9NQV5 511 aa22.71■■□□□ 1.23
SCN5A-212ENST00000476683 NWD2Q9ULI1 1742 aa22.71■■□□□ 1.23
SCN5A-212ENST00000476683 EIF4G2P78344 907 aaKnown RBP eCLIP22.7■■□□□ 1.22
SCN5A-212ENST00000476683 GJD4Q96KN9 370 aaPredicted RBP22.7■■□□□ 1.22
SCN5A-212ENST00000476683 KIAA0232Q92628 1395 aa22.7■■□□□ 1.22
SCN5A-212ENST00000476683 NRKQ7Z2Y5 1582 aa22.7■■□□□ 1.22
SCN5A-212ENST00000476683 MON2Q7Z3U7 1717 aa22.7■■□□□ 1.22
SCN5A-212ENST00000476683 COL14A1Q05707 1796 aaKnown RBP22.69■■□□□ 1.22
SCN5A-212ENST00000476683 PIK3C2AO00443 1686 aa22.69■■□□□ 1.22
SCN5A-212ENST00000476683 PLCH1Q4KWH8 1693 aa22.69■■□□□ 1.22
SCN5A-212ENST00000476683 ZC3H6P61129 1189 aaKnown RBP22.69■■□□□ 1.22
SCN5A-212ENST00000476683 BTG4Q9NY30 223 aa22.69■■□□□ 1.22
SCN5A-212ENST00000476683 A0A1W2PP64 1363 aa22.68■■□□□ 1.22
SCN5A-212ENST00000476683 CPDO75976 1380 aa22.68■■□□□ 1.22
SCN5A-212ENST00000476683 VPS72Q15906 364 aa22.68■■□□□ 1.22
SCN5A-212ENST00000476683 EDC4Q6P2E9 1401 aaKnown RBP22.66■■□□□ 1.22
SCN5A-212ENST00000476683 HSPA5P11021 654 aaKnown RBP22.66■■□□□ 1.22
SCN5A-212ENST00000476683 CHRNA2Q15822 529 aa22.66■■□□□ 1.22
SCN5A-212ENST00000476683 SLIT3O75094 1523 aa22.66■■□□□ 1.22
SCN5A-212ENST00000476683 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.65■■□□□ 1.22
SCN5A-212ENST00000476683 RGS12O14924 1447 aa22.65■■□□□ 1.22
SCN5A-212ENST00000476683 USP31Q70CQ4 1352 aa22.64■■□□□ 1.22
SCN5A-212ENST00000476683 ANKRD36BQ8N2N9 1353 aa22.63■■□□□ 1.21
SCN5A-212ENST00000476683 NRAPQ86VF7 1730 aa22.62■■□□□ 1.21
SCN5A-212ENST00000476683 NME9Q86XW9 330 aa22.62■■□□□ 1.21
SCN5A-212ENST00000476683 KCNH5Q8NCM2 988 aa22.62■■□□□ 1.21
SCN5A-212ENST00000476683 GLI3P10071 1580 aa22.61■■□□□ 1.21
SCN5A-212ENST00000476683 ZRANB1Q9UGI0 708 aa22.61■■□□□ 1.21
SCN5A-212ENST00000476683 ONECUT3O60422 494 aaPredicted RBP22.59■■□□□ 1.21
SCN5A-212ENST00000476683 CAMTA1Q9Y6Y1 1673 aa22.58■■□□□ 1.21
SCN5A-212ENST00000476683 ARHGEF25Q86VW2 580 aa22.58■■□□□ 1.21
SCN5A-212ENST00000476683 CCDC9Q9Y3X0 531 aaKnown RBP22.58■■□□□ 1.21
SCN5A-212ENST00000476683 AATKQ6ZMQ8 1374 aa22.58■■□□□ 1.21
SCN5A-212ENST00000476683 USP54Q70EL1 1684 aa22.58■■□□□ 1.2
SCN5A-212ENST00000476683 LMO7Q8WWI1 1683 aa22.57■■□□□ 1.2
SCN5A-212ENST00000476683 SPATA31A5Q5VU36 1347 aa22.57■■□□□ 1.2
SCN5A-212ENST00000476683 SPATA31A7Q8IWB4 1347 aa22.57■■□□□ 1.2
SCN5A-212ENST00000476683 NFAT5O94916 1531 aa22.55■■□□□ 1.2
SCN5A-212ENST00000476683 EVA1CP58658 441 aa22.54■■□□□ 1.2
SCN5A-212ENST00000476683 STRN4Q9NRL3 753 aa22.54■■□□□ 1.2
SCN5A-212ENST00000476683 OVOS2A0A0J9YW53 1432 aa22.54■■□□□ 1.2
SCN5A-212ENST00000476683 OVOS2Q6IE36 1432 aa22.54■■□□□ 1.2
SCN5A-212ENST00000476683 MYOM1P52179 1685 aa22.53■■□□□ 1.2
SCN5A-212ENST00000476683 SOX12O15370 315 aa22.53■■□□□ 1.2
SCN5A-212ENST00000476683 CARD14Q9BXL6 1004 aa22.53■■□□□ 1.2
SCN5A-212ENST00000476683 SPATA31A1Q5TZJ5 1347 aa22.53■■□□□ 1.2
SCN5A-212ENST00000476683 COL18A1P39060 1754 aa22.52■■□□□ 1.2
SCN5A-212ENST00000476683 ZBTB7CA1YPR0 619 aa22.51■■□□□ 1.19
SCN5A-212ENST00000476683 C11orf95C9JLR9 678 aaPredicted RBP22.51■■□□□ 1.19
SCN5A-212ENST00000476683 FYB1O15117 783 aa22.51■■□□□ 1.19
SCN5A-212ENST00000476683 LARP1Q6PKG0 1096 aaKnown RBP22.51■■□□□ 1.19
SCN5A-212ENST00000476683 SEPT12Q8IYM1 358 aa22.51■■□□□ 1.19
SCN5A-212ENST00000476683 AXIN2Q9Y2T1 843 aa22.51■■□□□ 1.19
SCN5A-212ENST00000476683 COL5A2P05997 1499 aaPredicted RBP22.5■■□□□ 1.19
SCN5A-212ENST00000476683 FAM98CQ17RN3 349 aaKnown RBP22.5■■□□□ 1.19
SCN5A-212ENST00000476683 UPF1Q92900 1129 aaKnown RBP eCLIP22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms