RNA–Protein interactions for RNA: ENST00000476640.1

HMGCS2-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

TSL 3

Gene HMGCS2, Length 857 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-203ENST00000476640 NUDT16Q96DE0 195 aaKnown RBP19.37■□□□□ 0.69
HMGCS2-203ENST00000476640 SEPT12Q8IYM1 358 aa19.36■□□□□ 0.69
HMGCS2-203ENST00000476640 ZRANB1Q9UGI0 708 aa19.36■□□□□ 0.69
HMGCS2-203ENST00000476640 BLMP54132 1417 aaPredicted RBP19.35■□□□□ 0.69
HMGCS2-203ENST00000476640 ONECUT3O60422 494 aaPredicted RBP19.34■□□□□ 0.69
HMGCS2-203ENST00000476640 SF3B2Q13435 895 aaKnown RBP19.34■□□□□ 0.69
HMGCS2-203ENST00000476640 CDK19Q9BWU1 502 aa19.34■□□□□ 0.69
HMGCS2-203ENST00000476640 BTG4Q9NY30 223 aa19.34■□□□□ 0.69
HMGCS2-203ENST00000476640 PHRF1Q9P1Y6 1649 aaKnown RBP19.33■□□□□ 0.69
HMGCS2-203ENST00000476640 A0A0G2JS52 829 aa19.32■□□□□ 0.68
HMGCS2-203ENST00000476640 MYT1Q01538 1121 aa19.32■□□□□ 0.68
HMGCS2-203ENST00000476640 QRICH2Q9H0J4 1663 aa19.31■□□□□ 0.68
HMGCS2-203ENST00000476640 KRT27Q7Z3Y8 459 aa19.31■□□□□ 0.68
HMGCS2-203ENST00000476640 CCDC61Q9Y6R9 512 aa19.31■□□□□ 0.68
HMGCS2-203ENST00000476640 POLR3AO14802 1390 aaPredicted RBP19.31■□□□□ 0.68
HMGCS2-203ENST00000476640 PRDM11Q9NQV5 511 aa19.3■□□□□ 0.68
HMGCS2-203ENST00000476640 CENPJQ9HC77 1338 aaPredicted RBP19.28■□□□□ 0.68
HMGCS2-203ENST00000476640 ACEP12821 1306 aa19.27■□□□□ 0.68
HMGCS2-203ENST00000476640 PLEKHG3A1L390 1219 aa19.27■□□□□ 0.68
HMGCS2-203ENST00000476640 FAM98CQ17RN3 349 aaKnown RBP19.27■□□□□ 0.68
HMGCS2-203ENST00000476640 NBPF1Q3BBV0 1214 aa19.27■□□□□ 0.68
HMGCS2-203ENST00000476640 NBPF8Q3BBV2 869 aa19.27■□□□□ 0.68
HMGCS2-203ENST00000476640 RGPD1P0DJD0 1748 aa19.26■□□□□ 0.67
HMGCS2-203ENST00000476640 SRPK2P78362 688 aaKnown RBP19.26■□□□□ 0.67
HMGCS2-203ENST00000476640 SPATA31A5Q5VU36 1347 aa19.25■□□□□ 0.67
HMGCS2-203ENST00000476640 SPATA31A7Q8IWB4 1347 aa19.25■□□□□ 0.67
HMGCS2-203ENST00000476640 THSD7AQ9UPZ6 1657 aa19.24■□□□□ 0.67
HMGCS2-203ENST00000476640 KIAA0232Q92628 1395 aa19.24■□□□□ 0.67
HMGCS2-203ENST00000476640 TRPM1Q7Z4N2 1603 aa19.24■□□□□ 0.67
HMGCS2-203ENST00000476640 PPIP5K1Q6PFW1 1433 aa19.24■□□□□ 0.67
HMGCS2-203ENST00000476640 BRD4O60885 1362 aaPredicted RBP19.23■□□□□ 0.67
HMGCS2-203ENST00000476640 ABTB2Q8N961 1025 aa19.23■□□□□ 0.67
HMGCS2-203ENST00000476640 NRKQ7Z2Y5 1582 aa19.22■□□□□ 0.67
HMGCS2-203ENST00000476640 BAG6P46379 1132 aa19.21■□□□□ 0.67
HMGCS2-203ENST00000476640 ZC3H6P61129 1189 aaKnown RBP19.21■□□□□ 0.67
HMGCS2-203ENST00000476640 NUTM2GQ5VZR2 741 aa19.21■□□□□ 0.67
HMGCS2-203ENST00000476640 L3MBTL2Q969R5 705 aa19.21■□□□□ 0.67
HMGCS2-203ENST00000476640 DEFB132Q7Z7B7 95 aa19.2■□□□□ 0.66
HMGCS2-203ENST00000476640 NLRP13Q86W25 1043 aa19.2■□□□□ 0.66
HMGCS2-203ENST00000476640 EVA1CP58658 441 aa19.19■□□□□ 0.66
HMGCS2-203ENST00000476640 CHRNA2Q15822 529 aa19.19■□□□□ 0.66
HMGCS2-203ENST00000476640 SPATA31A1Q5TZJ5 1347 aa19.19■□□□□ 0.66
HMGCS2-203ENST00000476640 CABP2Q9NPB3 220 aa19.18■□□□□ 0.66
HMGCS2-203ENST00000476640 STRN4Q9NRL3 753 aa19.18■□□□□ 0.66
HMGCS2-203ENST00000476640 USP19O94966 1318 aa19.18■□□□□ 0.66
HMGCS2-203ENST00000476640 EVC2Q86UK5 1308 aa19.18■□□□□ 0.66
HMGCS2-203ENST00000476640 CPDO75976 1380 aa19.18■□□□□ 0.66
HMGCS2-203ENST00000476640 LMO7Q8WWI1 1683 aa19.17■□□□□ 0.66
HMGCS2-203ENST00000476640 ROCK2O75116 1388 aaKnown RBP19.16■□□□□ 0.66
HMGCS2-203ENST00000476640 SSH2Q76I76 1423 aa19.16■□□□□ 0.66
HMGCS2-203ENST00000476640 TNS1Q9HBL0 1735 aaKnown RBP19.15■□□□□ 0.66
HMGCS2-203ENST00000476640 NEUROD1Q13562 356 aa19.14■□□□□ 0.65
HMGCS2-203ENST00000476640 CABP1Q9NZU7 370 aa19.14■□□□□ 0.65
HMGCS2-203ENST00000476640 USP6P35125 1406 aa19.14■□□□□ 0.65
HMGCS2-203ENST00000476640 CAMTA1Q9Y6Y1 1673 aa19.14■□□□□ 0.65
HMGCS2-203ENST00000476640 AKAP12Q02952 1782 aa19.14■□□□□ 0.65
HMGCS2-203ENST00000476640 SRCAPQ6ZRS2 3230 aa19.13■□□□□ 0.65
HMGCS2-203ENST00000476640 GCP02774 474 aa19.13■□□□□ 0.65
HMGCS2-203ENST00000476640 SIN3AQ96ST3 1273 aa19.13■□□□□ 0.65
HMGCS2-203ENST00000476640 FAM196AQ6ZSG2 479 aa19.12■□□□□ 0.65
HMGCS2-203ENST00000476640 BARGINQ6ZT62 677 aa19.12■□□□□ 0.65
HMGCS2-203ENST00000476640 USP35Q9P2H5 1018 aa19.11■□□□□ 0.65
HMGCS2-203ENST00000476640 PIK3C2AO00443 1686 aa19.11■□□□□ 0.65
HMGCS2-203ENST00000476640 DISP2A7MBM2 1401 aa19.1■□□□□ 0.65
HMGCS2-203ENST00000476640 NLRP6P59044 892 aa19.1■□□□□ 0.65
HMGCS2-203ENST00000476640 PDE3BQ13370 1112 aa19.1■□□□□ 0.65
HMGCS2-203ENST00000476640 FAM182BQ5T319 152 aa19.1■□□□□ 0.65
HMGCS2-203ENST00000476640 TCP11L2Q8N4U5 519 aa19.1■□□□□ 0.65
HMGCS2-203ENST00000476640 ZNF692Q9BU19 519 aaPredicted RBP19.1■□□□□ 0.65
HMGCS2-203ENST00000476640 THRAP3Q9Y2W1 955 aaKnown RBP19.1■□□□□ 0.65
HMGCS2-203ENST00000476640 PARP4Q9UKK3 1724 aaKnown RBP19.1■□□□□ 0.65
HMGCS2-203ENST00000476640 LRP5O75197 1615 aa19.1■□□□□ 0.65
HMGCS2-203ENST00000476640 SLIT3O75094 1523 aa19.1■□□□□ 0.65
HMGCS2-203ENST00000476640 LARP1Q6PKG0 1096 aaKnown RBP19.08■□□□□ 0.64
HMGCS2-203ENST00000476640 COL5A2P05997 1499 aaPredicted RBP19.08■□□□□ 0.64
HMGCS2-203ENST00000476640 EN1Q05925 392 aaPredicted RBP19.07■□□□□ 0.64
HMGCS2-203ENST00000476640 AATKQ6ZMQ8 1374 aa19.06■□□□□ 0.64
HMGCS2-203ENST00000476640 C11orf95C9JLR9 678 aaPredicted RBP19.06■□□□□ 0.64
HMGCS2-203ENST00000476640 CRB1P82279 1406 aa19.06■□□□□ 0.64
HMGCS2-203ENST00000476640 ZBTB7CA1YPR0 619 aa19.05■□□□□ 0.64
HMGCS2-203ENST00000476640 PARD3Q8TEW0 1356 aa19.05■□□□□ 0.64
HMGCS2-203ENST00000476640 WNK3Q9BYP7 1800 aa19.04■□□□□ 0.64
HMGCS2-203ENST00000476640 TTC21AQ8NDW8 1320 aa19.04■□□□□ 0.64
HMGCS2-203ENST00000476640 COL18A1P39060 1754 aa19.04■□□□□ 0.64
HMGCS2-203ENST00000476640 TRIM37O94972 964 aa19.04■□□□□ 0.64
HMGCS2-203ENST00000476640 MON2Q7Z3U7 1717 aa19.04■□□□□ 0.64
HMGCS2-203ENST00000476640 KCNH5Q8NCM2 988 aa19.04■□□□□ 0.64
HMGCS2-203ENST00000476640 RGPD5Q99666 1765 aa19.04■□□□□ 0.64
HMGCS2-203ENST00000476640 SBNO2Q9Y2G9 1366 aa19.03■□□□□ 0.64
HMGCS2-203ENST00000476640 PSDA5PKW4 1024 aaPredicted RBP19.02■□□□□ 0.64
HMGCS2-203ENST00000476640 KTN1Q86UP2 1357 aaKnown RBP19.02■□□□□ 0.64
HMGCS2-203ENST00000476640 RREB1Q92766 1687 aa19.01■□□□□ 0.63
HMGCS2-203ENST00000476640 TTC21BQ7Z4L5 1316 aa19.01■□□□□ 0.63
HMGCS2-203ENST00000476640 APBA3O96018 575 aa19.01■□□□□ 0.63
HMGCS2-203ENST00000476640 CARD11Q9BXL7 1154 aa19.01■□□□□ 0.63
HMGCS2-203ENST00000476640 TONSLQ96HA7 1378 aa19.01■□□□□ 0.63
HMGCS2-203ENST00000476640 CPSF1Q10570 1443 aaKnown RBP19■□□□□ 0.63
HMGCS2-203ENST00000476640 SBF2Q86WG5 1849 aa19■□□□□ 0.63
HMGCS2-203ENST00000476640 EZH2Q15910 746 aaKnown RBP18.99■□□□□ 0.63
HMGCS2-203ENST00000476640 TOM1L2Q6ZVM7 507 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms