RNA–Protein interactions for RNA: ENST00000476494.1

CLDN4-205, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-205ENST00000476494 PLSCR1O15162 318 aa10.1□□□□□ -0.79
CLDN4-205ENST00000476494 HAP1P54257 671 aaPredicted RBP10.1□□□□□ -0.79
CLDN4-205ENST00000476494 KIF1AQ12756 1690 aa10.09□□□□□ -0.79
CLDN4-205ENST00000476494 RGPD8O14715 1765 aaPredicted RBP10.09□□□□□ -0.79
CLDN4-205ENST00000476494 FMN2Q9NZ56 1722 aa10.08□□□□□ -0.8
CLDN4-205ENST00000476494 CAPN15O75808 1086 aa10.08□□□□□ -0.8
CLDN4-205ENST00000476494 ARHGEF10O15013 1369 aa10.07□□□□□ -0.8
CLDN4-205ENST00000476494 PLEKHG5O94827 1062 aa10.07□□□□□ -0.8
CLDN4-205ENST00000476494 SBF2Q86WG5 1849 aa10.07□□□□□ -0.8
CLDN4-205ENST00000476494 LOC105371045A0A1W2PR82 267 aa10.06□□□□□ -0.8
CLDN4-205ENST00000476494 PSME1Q06323 249 aa10.06□□□□□ -0.8
CLDN4-205ENST00000476494 GPR162Q16538 588 aa10.06□□□□□ -0.8
CLDN4-205ENST00000476494 ZNF326Q5BKZ1 582 aaKnown RBP10.06□□□□□ -0.8
CLDN4-205ENST00000476494 BARGINQ6ZT62 677 aa10.06□□□□□ -0.8
CLDN4-205ENST00000476494 MTFR1LQ9H019 292 aa10.06□□□□□ -0.8
CLDN4-205ENST00000476494 PEAK1Q9H792 1746 aa10.05□□□□□ -0.8
CLDN4-205ENST00000476494 CRYBG1Q9Y4K1 1723 aa10.05□□□□□ -0.8
CLDN4-205ENST00000476494 PTF1AQ7RTS3 328 aa10.05□□□□□ -0.8
CLDN4-205ENST00000476494 WAPLQ7Z5K2 1190 aa10.05□□□□□ -0.8
CLDN4-205ENST00000476494 ARXQ96QS3 562 aa10.05□□□□□ -0.8
CLDN4-205ENST00000476494 PCNTO95613 3336 aa10.05□□□□□ -0.8
CLDN4-205ENST00000476494 NRXN1Q9ULB1 1477 aa10.04□□□□□ -0.8
CLDN4-205ENST00000476494 PHF8Q9UPP1 1060 aa10.04□□□□□ -0.8
CLDN4-205ENST00000476494 TECPR2O15040 1411 aa10.04□□□□□ -0.8
CLDN4-205ENST00000476494 TRPM3Q9HCF6 1732 aaPredicted RBP10.04□□□□□ -0.8
CLDN4-205ENST00000476494 ALS2Q96Q42 1657 aa10.03□□□□□ -0.8
CLDN4-205ENST00000476494 PDE3BQ13370 1112 aa10.03□□□□□ -0.8
CLDN4-205ENST00000476494 ATP10DQ9P241 1426 aa10.03□□□□□ -0.8
CLDN4-205ENST00000476494 PLEKHH1Q9ULM0 1364 aa10.02□□□□□ -0.8
CLDN4-205ENST00000476494 SLC15A2Q16348 729 aa10.02□□□□□ -0.81
CLDN4-205ENST00000476494 ADCY9O60503 1353 aa10.01□□□□□ -0.81
CLDN4-205ENST00000476494 VGFO15240 615 aaPredicted RBP10.01□□□□□ -0.81
CLDN4-205ENST00000476494 LMOD2Q6P5Q4 547 aa10.01□□□□□ -0.81
CLDN4-205ENST00000476494 TNS4Q8IZW8 715 aa10.01□□□□□ -0.81
CLDN4-205ENST00000476494 COL24A1Q17RW2 1714 aa10□□□□□ -0.81
CLDN4-205ENST00000476494 YBX3P16989 372 aaKnown RBP eCLIP10□□□□□ -0.81
CLDN4-205ENST00000476494 JMYQ8N9B5 988 aa10□□□□□ -0.81
CLDN4-205ENST00000476494 CLTCL1P53675 1640 aa10□□□□□ -0.81
CLDN4-205ENST00000476494 KIF3CO14782 793 aa9.99□□□□□ -0.81
CLDN4-205ENST00000476494 APLP1P51693 650 aa9.99□□□□□ -0.81
CLDN4-205ENST00000476494 BCL11BQ9C0K0 894 aaPredicted RBP9.99□□□□□ -0.81
CLDN4-205ENST00000476494 GPBP1L1Q9HC44 474 aaPredicted RBP9.99□□□□□ -0.81
CLDN4-205ENST00000476494 ABCC11Q96J66 1382 aa9.99□□□□□ -0.81
CLDN4-205ENST00000476494 PARP4Q9UKK3 1724 aaKnown RBP9.99□□□□□ -0.81
CLDN4-205ENST00000476494 C11orf95C9JLR9 678 aaPredicted RBP9.98□□□□□ -0.81
CLDN4-205ENST00000476494 PRDM11Q9NQV5 511 aa9.98□□□□□ -0.81
CLDN4-205ENST00000476494 TXNRD1Q16881 649 aa9.97□□□□□ -0.81
CLDN4-205ENST00000476494 NLGN2Q8NFZ4 835 aa9.97□□□□□ -0.81
CLDN4-205ENST00000476494 USP35Q9P2H5 1018 aa9.97□□□□□ -0.81
CLDN4-205ENST00000476494 NUP155O75694 1391 aa9.97□□□□□ -0.81
CLDN4-205ENST00000476494 IFT172Q9UG01 1749 aa9.96□□□□□ -0.81
CLDN4-205ENST00000476494 CHRNA2Q15822 529 aa9.96□□□□□ -0.82
CLDN4-205ENST00000476494 TCP11L2Q8N4U5 519 aa9.96□□□□□ -0.82
CLDN4-205ENST00000476494 STRN4Q9NRL3 753 aa9.96□□□□□ -0.82
CLDN4-205ENST00000476494 STK32BQ9NY57 414 aa9.96□□□□□ -0.82
CLDN4-205ENST00000476494 KIAA0232Q92628 1395 aa9.96□□□□□ -0.82
CLDN4-205ENST00000476494 SSH2Q76I76 1423 aa9.96□□□□□ -0.82
CLDN4-205ENST00000476494 KIF1BO60333 1816 aa9.96□□□□□ -0.82
CLDN4-205ENST00000476494 GRIN3BO60391 1043 aa9.95□□□□□ -0.82
CLDN4-205ENST00000476494 LARP1Q6PKG0 1096 aaKnown RBP9.95□□□□□ -0.82
CLDN4-205ENST00000476494 AATKQ6ZMQ8 1374 aa9.95□□□□□ -0.82
CLDN4-205ENST00000476494 OVOS2A0A0G2JMS6 1433 aa9.95□□□□□ -0.82
CLDN4-205ENST00000476494 OVOS2A0A0J9YW53 1432 aa9.95□□□□□ -0.82
CLDN4-205ENST00000476494 OVOS2Q6IE36 1432 aa9.95□□□□□ -0.82
CLDN4-205ENST00000476494 ATP7BP35670 1465 aa9.95□□□□□ -0.82
CLDN4-205ENST00000476494 KNDC1Q76NI1 1749 aa9.95□□□□□ -0.82
CLDN4-205ENST00000476494 PPLO60437 1756 aa9.94□□□□□ -0.82
CLDN4-205ENST00000476494 BCL9O00512 1426 aa9.94□□□□□ -0.82
CLDN4-205ENST00000476494 VPS8Q8N3P4 1428 aa9.94□□□□□ -0.82
CLDN4-205ENST00000476494 RPGRIP1LQ68CZ1 1315 aa9.94□□□□□ -0.82
CLDN4-205ENST00000476494 PMFBP1Q8TBY8 1022 aa9.94□□□□□ -0.82
CLDN4-205ENST00000476494 STK26Q9P289 416 aa9.94□□□□□ -0.82
CLDN4-205ENST00000476494 THRAP3Q9Y2W1 955 aaKnown RBP9.94□□□□□ -0.82
CLDN4-205ENST00000476494 PAPPAQ13219 1627 aa9.93□□□□□ -0.82
CLDN4-205ENST00000476494 KLRG1Q96E93 195 aa9.93□□□□□ -0.82
CLDN4-205ENST00000476494 SIRT1Q96EB6 747 aa9.93□□□□□ -0.82
CLDN4-205ENST00000476494 DHX57Q6P158 1386 aaKnown RBP9.92□□□□□ -0.82
CLDN4-205ENST00000476494 PELP1Q8IZL8 1130 aaKnown RBP9.92□□□□□ -0.82
CLDN4-205ENST00000476494 WDR90Q96KV7 1748 aa9.92□□□□□ -0.82
CLDN4-205ENST00000476494 LMO7Q8WWI1 1683 aa9.92□□□□□ -0.82
CLDN4-205ENST00000476494 PHRF1Q9P1Y6 1649 aaKnown RBP9.92□□□□□ -0.82
CLDN4-205ENST00000476494 ACIN1Q9UKV3 1341 aaKnown RBP9.91□□□□□ -0.82
CLDN4-205ENST00000476494 ZNF526Q8TF50 670 aaPredicted RBP9.91□□□□□ -0.82
CLDN4-205ENST00000476494 ADGRF5Q8IZF2 1346 aa9.9□□□□□ -0.82
CLDN4-205ENST00000476494 TMEM132EQ6IEE7 984 aa9.9□□□□□ -0.82
CLDN4-205ENST00000476494 MARCH10Q8NA82 808 aaPredicted RBP9.9□□□□□ -0.82
CLDN4-205ENST00000476494 WWC3Q9ULE0 1092 aa9.9□□□□□ -0.82
CLDN4-205ENST00000476494 LRRC37A3O60309 1634 aa9.89□□□□□ -0.83
CLDN4-205ENST00000476494 ZC3H6P61129 1189 aaKnown RBP9.89□□□□□ -0.83
CLDN4-205ENST00000476494 HTRA3P83110 453 aa9.89□□□□□ -0.83
CLDN4-205ENST00000476494 ZNF827Q17R98 1081 aa9.89□□□□□ -0.83
CLDN4-205ENST00000476494 ANKARQ7Z5J8 1434 aa9.89□□□□□ -0.83
CLDN4-205ENST00000476494 TOMM70O94826 608 aa9.88□□□□□ -0.83
CLDN4-205ENST00000476494 EVA1CP58658 441 aa9.88□□□□□ -0.83
CLDN4-205ENST00000476494 SLC16A10Q8TF71 515 aa9.88□□□□□ -0.83
CLDN4-205ENST00000476494 ROCK1Q13464 1354 aa9.88□□□□□ -0.83
CLDN4-205ENST00000476494 QSER1Q2KHR3 1735 aa9.87□□□□□ -0.83
CLDN4-205ENST00000476494 PRR36Q9H6K5 1346 aa9.87□□□□□ -0.83
CLDN4-205ENST00000476494 YTHDC2Q9H6S0 1430 aaKnown RBP9.87□□□□□ -0.83
CLDN4-205ENST00000476494 ARHGEF28Q8N1W1 1705 aaKnown RBP9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms