RNA–Protein interactions for RNA: ENST00000476135.5

HDAC9-223, Transcript of histone deacetylase 9, human

TSL 5

Gene HDAC9, Length 1,115 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC9-223	ENST00000476135	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	11.43	□□□□□ -0.58
HDAC9-223	ENST00000476135	ADGRL3	Q9HAR2	1447 aa		11.43	□□□□□ -0.58
HDAC9-223	ENST00000476135	CHRM1	P11229	460 aa	Predicted RBP	11.42	□□□□□ -0.58
HDAC9-223	ENST00000476135	MYOM2	P54296	1465 aa		11.42	□□□□□ -0.58
HDAC9-223	ENST00000476135	C1orf167	Q5SNV9	1468 aa		11.42	□□□□□ -0.58
HDAC9-223	ENST00000476135	ABCC5	O15440	1437 aa		11.42	□□□□□ -0.58
HDAC9-223	ENST00000476135	GLI3	P10071	1580 aa		11.41	□□□□□ -0.58
HDAC9-223	ENST00000476135	NALCN	Q8IZF0	1738 aa		11.4	□□□□□ -0.58
HDAC9-223	ENST00000476135	RALGAPB	Q86X10	1494 aa		11.4	□□□□□ -0.58
HDAC9-223	ENST00000476135	BAG6	P46379	1132 aa		11.4	□□□□□ -0.58
HDAC9-223	ENST00000476135	ZNF467	Q7Z7K2	595 aa	Predicted RBP	11.4	□□□□□ -0.58
HDAC9-223	ENST00000476135	CHGA	P10645	457 aa	Known RBP	11.39	□□□□□ -0.59
HDAC9-223	ENST00000476135	IRX5	P78411	483 aa	Predicted RBP	11.38	□□□□□ -0.59
HDAC9-223	ENST00000476135	UNC5CL	Q8IV45	518 aa		11.38	□□□□□ -0.59
HDAC9-223	ENST00000476135	NRXN3	Q9Y4C0	1643 aa		11.38	□□□□□ -0.59
HDAC9-223	ENST00000476135	PLCG2	P16885	1265 aa		11.37	□□□□□ -0.59
HDAC9-223	ENST00000476135	CIZ1	Q9ULV3	898 aa	Predicted RBP	11.37	□□□□□ -0.59
HDAC9-223	ENST00000476135	PTPN23	Q9H3S7	1636 aa		11.37	□□□□□ -0.59
HDAC9-223	ENST00000476135	ANKRD30A	Q9BXX3	1397 aa		11.37	□□□□□ -0.59
HDAC9-223	ENST00000476135	DAPK1	P53355	1430 aa		11.36	□□□□□ -0.59
HDAC9-223	ENST00000476135	SLIT2	O94813	1529 aa		11.36	□□□□□ -0.59
HDAC9-223	ENST00000476135	SEPT12	Q8IYM1	358 aa		11.36	□□□□□ -0.59
HDAC9-223	ENST00000476135	ORAI2	Q96SN7	254 aa		11.36	□□□□□ -0.59
HDAC9-223	ENST00000476135	ONECUT3	O60422	494 aa	Predicted RBP	11.35	□□□□□ -0.59
HDAC9-223	ENST00000476135	R3HDM1	Q15032	1099 aa	Known RBP	11.35	□□□□□ -0.59
HDAC9-223	ENST00000476135	KRT27	Q7Z3Y8	459 aa		11.34	□□□□□ -0.59
HDAC9-223	ENST00000476135	MET	P08581	1390 aa		11.33	□□□□□ -0.6
HDAC9-223	ENST00000476135	NPHP3	Q7Z494	1330 aa		11.33	□□□□□ -0.6
HDAC9-223	ENST00000476135	RGPD1	P0DJD0	1748 aa		11.32	□□□□□ -0.6
HDAC9-223	ENST00000476135	IQGAP3	Q86VI3	1631 aa		11.32	□□□□□ -0.6
HDAC9-223	ENST00000476135	OCEL1	Q9H607	264 aa		11.32	□□□□□ -0.6
HDAC9-223	ENST00000476135	PXDN	Q92626	1479 aa		11.32	□□□□□ -0.6
HDAC9-223	ENST00000476135	PSEN1	P49768	467 aa		11.31	□□□□□ -0.6
HDAC9-223	ENST00000476135	EN1	Q05925	392 aa	Predicted RBP	11.31	□□□□□ -0.6
HDAC9-223	ENST00000476135	VPS72	Q15906	364 aa		11.31	□□□□□ -0.6
HDAC9-223	ENST00000476135		E9PCH4	1651 aa		11.3	□□□□□ -0.6
HDAC9-223	ENST00000476135	DISP2	A7MBM2	1401 aa		11.3	□□□□□ -0.6
HDAC9-223	ENST00000476135	CHIC2	Q9UKJ5	165 aa		11.3	□□□□□ -0.6
HDAC9-223	ENST00000476135	SENP3-EIF4A1	A0A087X0R7	540 aa		11.29	□□□□□ -0.6
HDAC9-223	ENST00000476135	POTEM	A6NI47	508 aa		11.29	□□□□□ -0.6
HDAC9-223	ENST00000476135	NWD2	Q9ULI1	1742 aa		11.29	□□□□□ -0.6
HDAC9-223	ENST00000476135	ADGRL2	O95490	1459 aa		11.28	□□□□□ -0.6
HDAC9-223	ENST00000476135	KANK4	Q5T7N3	995 aa	Predicted RBP	11.28	□□□□□ -0.6
HDAC9-223	ENST00000476135	LCE2D	Q5TA82	110 aa	Predicted RBP	11.28	□□□□□ -0.6
HDAC9-223	ENST00000476135	POTEG	Q6S5H5	508 aa		11.28	□□□□□ -0.6
HDAC9-223	ENST00000476135	USP32	Q8NFA0	1604 aa		11.27	□□□□□ -0.6
HDAC9-223	ENST00000476135	PDAP1	Q13442	181 aa	Known RBP	11.27	□□□□□ -0.61
HDAC9-223	ENST00000476135	FAM163A	Q96GL9	167 aa	Predicted RBP	11.27	□□□□□ -0.61
HDAC9-223	ENST00000476135	LRPPRC	P42704	1394 aa	Known RBP	11.27	□□□□□ -0.61
HDAC9-223	ENST00000476135	ANKRD50	Q9ULJ7	1429 aa		11.26	□□□□□ -0.61
HDAC9-223	ENST00000476135	ESCO1	Q5FWF5	840 aa		11.26	□□□□□ -0.61
HDAC9-223	ENST00000476135	NINL	Q9Y2I6	1382 aa		11.26	□□□□□ -0.61
HDAC9-223	ENST00000476135	TNS1	Q9HBL0	1735 aa	Known RBP	11.26	□□□□□ -0.61
HDAC9-223	ENST00000476135	PLCH1	Q4KWH8	1693 aa		11.25	□□□□□ -0.61
HDAC9-223	ENST00000476135	FOXO3	O43524	673 aa		11.25	□□□□□ -0.61
HDAC9-223	ENST00000476135	GOLGA2	Q08379	1002 aa		11.25	□□□□□ -0.61
HDAC9-223	ENST00000476135	MKRN3	Q13064	507 aa	Known RBP	11.25	□□□□□ -0.61
HDAC9-223	ENST00000476135	ZNF784	Q8NCA9	323 aa	Predicted RBP	11.25	□□□□□ -0.61
HDAC9-223	ENST00000476135	CCDC9	Q9Y3X0	531 aa	Known RBP	11.25	□□□□□ -0.61
HDAC9-223	ENST00000476135	PRAG1	Q86YV5	1406 aa		11.25	□□□□□ -0.61
HDAC9-223	ENST00000476135	EZH2	Q15910	746 aa	Known RBP	11.24	□□□□□ -0.61
HDAC9-223	ENST00000476135	PDCD7	Q8N8D1	485 aa	Known RBP	11.24	□□□□□ -0.61
HDAC9-223	ENST00000476135	SLAIN1	Q8ND83	568 aa		11.24	□□□□□ -0.61
HDAC9-223	ENST00000476135	ROBO2	Q9HCK4	1378 aa		11.24	□□□□□ -0.61
HDAC9-223	ENST00000476135	C1QTNF8	P60827	252 aa		11.23	□□□□□ -0.61
HDAC9-223	ENST00000476135	XPC	Q01831	940 aa	Predicted RBP	11.23	□□□□□ -0.61
HDAC9-223	ENST00000476135	CAMKK2	Q96RR4	588 aa		11.23	□□□□□ -0.61
HDAC9-223	ENST00000476135	PPP1R1B	Q9UD71	204 aa	Predicted RBP	11.23	□□□□□ -0.61
HDAC9-223	ENST00000476135	SPATA31A3	Q5VYP0	1347 aa		11.23	□□□□□ -0.61
HDAC9-223	ENST00000476135	PARD3	Q8TEW0	1356 aa		11.23	□□□□□ -0.61
HDAC9-223	ENST00000476135	HFM1	A2PYH4	1435 aa		11.23	□□□□□ -0.61
HDAC9-223	ENST00000476135	CDC42BPG	Q6DT37	1551 aa		11.23	□□□□□ -0.61
HDAC9-223	ENST00000476135		A0A0G2JS52	829 aa		11.22	□□□□□ -0.61
HDAC9-223	ENST00000476135	ADGRB2	O60241	1585 aa		11.22	□□□□□ -0.61
HDAC9-223	ENST00000476135	MYT1	Q01538	1121 aa		11.22	□□□□□ -0.61
HDAC9-223	ENST00000476135	ZNF326	Q5BKZ1	582 aa	Known RBP	11.22	□□□□□ -0.61
HDAC9-223	ENST00000476135	VPS8	Q8N3P4	1428 aa		11.22	□□□□□ -0.61
HDAC9-223	ENST00000476135	SPON1	Q9HCB6	807 aa		11.21	□□□□□ -0.61
HDAC9-223	ENST00000476135	NEXMIF	Q5QGS0	1516 aa		11.2	□□□□□ -0.62
HDAC9-223	ENST00000476135	FAM98C	Q17RN3	349 aa	Known RBP	11.2	□□□□□ -0.62
HDAC9-223	ENST00000476135	RREB1	Q92766	1687 aa		11.2	□□□□□ -0.62
HDAC9-223	ENST00000476135	CAMTA1	Q9Y6Y1	1673 aa		11.2	□□□□□ -0.62
HDAC9-223	ENST00000476135	KCNQ2	O43526	872 aa		11.19	□□□□□ -0.62
HDAC9-223	ENST00000476135	HAP1	P54257	671 aa	Predicted RBP	11.19	□□□□□ -0.62
HDAC9-223	ENST00000476135	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	11.19	□□□□□ -0.62
HDAC9-223	ENST00000476135	CCDC144A	A2RUR9	1427 aa		11.18	□□□□□ -0.62
HDAC9-223	ENST00000476135	NRAP	Q86VF7	1730 aa		11.18	□□□□□ -0.62
HDAC9-223	ENST00000476135	NBPF8	Q3BBV2	869 aa		11.18	□□□□□ -0.62
HDAC9-223	ENST00000476135	FAM182B	Q5T319	152 aa		11.18	□□□□□ -0.62
HDAC9-223	ENST00000476135	NBPF14	Q5TI25	921 aa		11.18	□□□□□ -0.62
HDAC9-223	ENST00000476135	NUP188	Q5SRE5	1749 aa		11.18	□□□□□ -0.62
HDAC9-223	ENST00000476135	KIF1A	Q12756	1690 aa		11.17	□□□□□ -0.62
HDAC9-223	ENST00000476135	CABP2	Q9NPB3	220 aa		11.17	□□□□□ -0.62
HDAC9-223	ENST00000476135	ABCA3	Q99758	1704 aa		11.17	□□□□□ -0.62
HDAC9-223	ENST00000476135	CHD4	Q14839	1912 aa		11.16	□□□□□ -0.62
HDAC9-223	ENST00000476135	KRT28	Q7Z3Y7	464 aa		11.16	□□□□□ -0.62
HDAC9-223	ENST00000476135	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	11.16	□□□□□ -0.62
HDAC9-223	ENST00000476135	THSD7A	Q9UPZ6	1657 aa		11.16	□□□□□ -0.62
HDAC9-223	ENST00000476135	TNS3	Q68CZ2	1445 aa		11.16	□□□□□ -0.62
HDAC9-223	ENST00000476135	FAM83G	A6ND36	823 aa		11.15	□□□□□ -0.62

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