RNA–Protein interactions for RNA: ENST00000476018.2

VSTM4-203, Transcript of V-set and transmembrane domain containing 4, humanhuman

TSL 5

Gene VSTM4, Length 659 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-203ENST00000476018 VPS72Q15906 364 aa18.86■□□□□ 0.61
VSTM4-203ENST00000476018 CABLES1Q8TDN4 633 aa18.86■□□□□ 0.61
VSTM4-203ENST00000476018 SRCAPQ6ZRS2 3230 aa18.86■□□□□ 0.61
VSTM4-203ENST00000476018 WASLO00401 505 aaPredicted RBP18.85■□□□□ 0.61
VSTM4-203ENST00000476018 TRPM3Q9HCF6 1732 aaPredicted RBP18.85■□□□□ 0.61
VSTM4-203ENST00000476018 PLEKHG5O94827 1062 aa18.84■□□□□ 0.61
VSTM4-203ENST00000476018 ZRANB1Q9UGI0 708 aa18.83■□□□□ 0.6
VSTM4-203ENST00000476018 CCDC9Q9Y3X0 531 aaKnown RBP18.83■□□□□ 0.6
VSTM4-203ENST00000476018 ALS2Q96Q42 1657 aa18.82■□□□□ 0.6
VSTM4-203ENST00000476018 PRR36Q9H6K5 1346 aa18.82■□□□□ 0.6
VSTM4-203ENST00000476018 ITSN1Q15811 1721 aa18.82■□□□□ 0.6
VSTM4-203ENST00000476018 ARHGEF28Q8N1W1 1705 aaKnown RBP18.82■□□□□ 0.6
VSTM4-203ENST00000476018 BLMP54132 1417 aaPredicted RBP18.82■□□□□ 0.6
VSTM4-203ENST00000476018 NGDNQ8NEJ9 315 aaKnown RBP18.81■□□□□ 0.6
VSTM4-203ENST00000476018 SEPT12Q8IYM1 358 aa18.8■□□□□ 0.6
VSTM4-203ENST00000476018 FAM83GA6ND36 823 aa18.79■□□□□ 0.6
VSTM4-203ENST00000476018 BRWD3Q6RI45 1802 aa18.79■□□□□ 0.6
VSTM4-203ENST00000476018 COL14A1Q05707 1796 aaKnown RBP18.78■□□□□ 0.6
VSTM4-203ENST00000476018 ATP7BP35670 1465 aa18.78■□□□□ 0.6
VSTM4-203ENST00000476018 ONECUT3O60422 494 aaPredicted RBP18.78■□□□□ 0.6
VSTM4-203ENST00000476018 SF3B2Q13435 895 aaKnown RBP18.78■□□□□ 0.6
VSTM4-203ENST00000476018 NRAPQ86VF7 1730 aa18.77■□□□□ 0.6
VSTM4-203ENST00000476018 KIAA1210Q9ULL0 1709 aa18.77■□□□□ 0.6
VSTM4-203ENST00000476018 PAK3O75914 559 aaPredicted RBP18.77■□□□□ 0.6
VSTM4-203ENST00000476018 KRT27Q7Z3Y8 459 aa18.76■□□□□ 0.59
VSTM4-203ENST00000476018 BTG4Q9NY30 223 aa18.76■□□□□ 0.59
VSTM4-203ENST00000476018 A0A0G2JS52 829 aa18.75■□□□□ 0.59
VSTM4-203ENST00000476018 MYT1Q01538 1121 aa18.75■□□□□ 0.59
VSTM4-203ENST00000476018 NUDT16Q96DE0 195 aaKnown RBP18.75■□□□□ 0.59
VSTM4-203ENST00000476018 CRYBG1Q9Y4K1 1723 aa18.74■□□□□ 0.59
VSTM4-203ENST00000476018 CDK19Q9BWU1 502 aa18.72■□□□□ 0.59
VSTM4-203ENST00000476018 PRDM11Q9NQV5 511 aa18.72■□□□□ 0.59
VSTM4-203ENST00000476018 DSG3P32926 999 aa18.71■□□□□ 0.59
VSTM4-203ENST00000476018 FAM98CQ17RN3 349 aaKnown RBP18.71■□□□□ 0.59
VSTM4-203ENST00000476018 POLR3AO14802 1390 aaPredicted RBP18.7■□□□□ 0.58
VSTM4-203ENST00000476018 TOPAZ1Q8N9V7 1692 aa18.7■□□□□ 0.58
VSTM4-203ENST00000476018 CCDC61Q9Y6R9 512 aa18.7■□□□□ 0.58
VSTM4-203ENST00000476018 SPATA31A5Q5VU36 1347 aa18.69■□□□□ 0.58
VSTM4-203ENST00000476018 SPATA31A7Q8IWB4 1347 aa18.69■□□□□ 0.58
VSTM4-203ENST00000476018 PHRF1Q9P1Y6 1649 aaKnown RBP18.68■□□□□ 0.58
VSTM4-203ENST00000476018 DEFB132Q7Z7B7 95 aa18.68■□□□□ 0.58
VSTM4-203ENST00000476018 ACEP12821 1306 aa18.67■□□□□ 0.58
VSTM4-203ENST00000476018 KIAA0232Q92628 1395 aa18.67■□□□□ 0.58
VSTM4-203ENST00000476018 PLEKHG3A1L390 1219 aa18.66■□□□□ 0.58
VSTM4-203ENST00000476018 BAG6P46379 1132 aa18.66■□□□□ 0.58
VSTM4-203ENST00000476018 NBPF8Q3BBV2 869 aa18.65■□□□□ 0.58
VSTM4-203ENST00000476018 THSD7AQ9UPZ6 1657 aa18.65■□□□□ 0.58
VSTM4-203ENST00000476018 CENPJQ9HC77 1338 aaPredicted RBP18.65■□□□□ 0.58
VSTM4-203ENST00000476018 SRPK2P78362 688 aaKnown RBP18.64■□□□□ 0.57
VSTM4-203ENST00000476018 NBPF1Q3BBV0 1214 aa18.64■□□□□ 0.57
VSTM4-203ENST00000476018 RGPD1P0DJD0 1748 aa18.63■□□□□ 0.57
VSTM4-203ENST00000476018 ABTB2Q8N961 1025 aa18.62■□□□□ 0.57
VSTM4-203ENST00000476018 SPATA31A1Q5TZJ5 1347 aa18.62■□□□□ 0.57
VSTM4-203ENST00000476018 BRD4O60885 1362 aaPredicted RBP18.62■□□□□ 0.57
VSTM4-203ENST00000476018 PPIP5K1Q6PFW1 1433 aa18.62■□□□□ 0.57
VSTM4-203ENST00000476018 NRKQ7Z2Y5 1582 aa18.61■□□□□ 0.57
VSTM4-203ENST00000476018 ZC3H6P61129 1189 aaKnown RBP18.61■□□□□ 0.57
VSTM4-203ENST00000476018 CHRNA2Q15822 529 aa18.61■□□□□ 0.57
VSTM4-203ENST00000476018 NUTM2GQ5VZR2 741 aa18.61■□□□□ 0.57
VSTM4-203ENST00000476018 STRN4Q9NRL3 753 aa18.61■□□□□ 0.57
VSTM4-203ENST00000476018 QRICH2Q9H0J4 1663 aa18.6■□□□□ 0.57
VSTM4-203ENST00000476018 CPDO75976 1380 aa18.6■□□□□ 0.57
VSTM4-203ENST00000476018 USP19O94966 1318 aa18.59■□□□□ 0.57
VSTM4-203ENST00000476018 EVA1CP58658 441 aa18.59■□□□□ 0.57
VSTM4-203ENST00000476018 NLRP13Q86W25 1043 aa18.59■□□□□ 0.57
VSTM4-203ENST00000476018 SSH2Q76I76 1423 aa18.58■□□□□ 0.57
VSTM4-203ENST00000476018 DISP2A7MBM2 1401 aa18.57■□□□□ 0.56
VSTM4-203ENST00000476018 SAMD1Q6SPF0 538 aaPredicted RBP18.57■□□□□ 0.56
VSTM4-203ENST00000476018 CABP2Q9NPB3 220 aa18.57■□□□□ 0.56
VSTM4-203ENST00000476018 FAM196AQ6ZSG2 479 aa18.56■□□□□ 0.56
VSTM4-203ENST00000476018 BARGINQ6ZT62 677 aa18.56■□□□□ 0.56
VSTM4-203ENST00000476018 LMO7Q8WWI1 1683 aa18.55■□□□□ 0.56
VSTM4-203ENST00000476018 FAM182BQ5T319 152 aa18.55■□□□□ 0.56
VSTM4-203ENST00000476018 L3MBTL2Q969R5 705 aa18.55■□□□□ 0.56
VSTM4-203ENST00000476018 LRP5O75197 1615 aa18.55■□□□□ 0.56
VSTM4-203ENST00000476018 TNS1Q9HBL0 1735 aaKnown RBP18.54■□□□□ 0.56
VSTM4-203ENST00000476018 GCP02774 474 aa18.54■□□□□ 0.56
VSTM4-203ENST00000476018 EN1Q05925 392 aaPredicted RBP18.54■□□□□ 0.56
VSTM4-203ENST00000476018 USP35Q9P2H5 1018 aa18.54■□□□□ 0.56
VSTM4-203ENST00000476018 CAMTA1Q9Y6Y1 1673 aa18.54■□□□□ 0.56
VSTM4-203ENST00000476018 EVC2Q86UK5 1308 aa18.53■□□□□ 0.56
VSTM4-203ENST00000476018 TRPM1Q7Z4N2 1603 aa18.53■□□□□ 0.56
VSTM4-203ENST00000476018 USP6P35125 1406 aa18.53■□□□□ 0.56
VSTM4-203ENST00000476018 TCP11L2Q8N4U5 519 aa18.53■□□□□ 0.56
VSTM4-203ENST00000476018 ZNF219Q9P2Y4 722 aaPredicted RBP18.53■□□□□ 0.56
VSTM4-203ENST00000476018 THRAP3Q9Y2W1 955 aaKnown RBP18.53■□□□□ 0.56
VSTM4-203ENST00000476018 PDE3BQ13370 1112 aa18.52■□□□□ 0.56
VSTM4-203ENST00000476018 CABP1Q9NZU7 370 aa18.52■□□□□ 0.56
VSTM4-203ENST00000476018 ROCK2O75116 1388 aaKnown RBP18.52■□□□□ 0.55
VSTM4-203ENST00000476018 LARP1Q6PKG0 1096 aaKnown RBP18.51■□□□□ 0.55
VSTM4-203ENST00000476018 PARD3Q8TEW0 1356 aa18.51■□□□□ 0.55
VSTM4-203ENST00000476018 MYCNP04198 464 aaPredicted RBP18.5■□□□□ 0.55
VSTM4-203ENST00000476018 COL5A2P05997 1499 aaPredicted RBP18.5■□□□□ 0.55
VSTM4-203ENST00000476018 SLIT3O75094 1523 aa18.49■□□□□ 0.55
VSTM4-203ENST00000476018 PSDA5PKW4 1024 aaPredicted RBP18.49■□□□□ 0.55
VSTM4-203ENST00000476018 TRIM37O94972 964 aa18.49■□□□□ 0.55
VSTM4-203ENST00000476018 NLRP6P59044 892 aa18.49■□□□□ 0.55
VSTM4-203ENST00000476018 AATKQ6ZMQ8 1374 aa18.48■□□□□ 0.55
VSTM4-203ENST00000476018 C11orf95C9JLR9 678 aaPredicted RBP18.48■□□□□ 0.55
VSTM4-203ENST00000476018 CRB1P82279 1406 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms