RNA–Protein interactions for RNA: ENST00000475988.1

PKP1-204, Transcript of plakophilin 1, humanhuman

TSL 3

Gene PKP1, Length 931 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP1-204ENST00000475988 NCOA3Q9Y6Q9 1424 aa18■□□□□ 0.47
PKP1-204ENST00000475988 LRRC7Q96NW7 1537 aa18■□□□□ 0.47
PKP1-204ENST00000475988 AATKQ6ZMQ8 1374 aa18■□□□□ 0.47
PKP1-204ENST00000475988 MTHFSP49914 203 aa17.99■□□□□ 0.47
PKP1-204ENST00000475988 TTC21BQ7Z4L5 1316 aa17.98■□□□□ 0.47
PKP1-204ENST00000475988 WDR43Q15061 677 aaKnown RBP eCLIP17.98■□□□□ 0.47
PKP1-204ENST00000475988 PIK3C2AO00443 1686 aa17.97■□□□□ 0.47
PKP1-204ENST00000475988 NME9Q86XW9 330 aa17.97■□□□□ 0.47
PKP1-204ENST00000475988 GTF3C3Q9Y5Q9 886 aa17.97■□□□□ 0.47
PKP1-204ENST00000475988 MARF1Q9Y4F3 1742 aaKnown RBP17.97■□□□□ 0.47
PKP1-204ENST00000475988 HSPA2P54652 639 aa17.96■□□□□ 0.47
PKP1-204ENST00000475988 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.96■□□□□ 0.47
PKP1-204ENST00000475988 DCCP43146 1447 aa17.96■□□□□ 0.47
PKP1-204ENST00000475988 TTC21AQ8NDW8 1320 aa17.96■□□□□ 0.46
PKP1-204ENST00000475988 MAP2P11137 1827 aaKnown RBP17.95■□□□□ 0.46
PKP1-204ENST00000475988 CDK12Q9NYV4 1490 aaPredicted RBP17.95■□□□□ 0.46
PKP1-204ENST00000475988 USP31Q70CQ4 1352 aa17.95■□□□□ 0.46
PKP1-204ENST00000475988 TNNT2P45379 298 aaPredicted RBP17.95■□□□□ 0.46
PKP1-204ENST00000475988 CFAP53Q96M91 514 aa17.95■□□□□ 0.46
PKP1-204ENST00000475988 IQSEC2Q5JU85 1478 aa17.95■□□□□ 0.46
PKP1-204ENST00000475988 NUTM2FA1L443 756 aa17.93■□□□□ 0.46
PKP1-204ENST00000475988 XIRP1Q702N8 1843 aaKnown RBP17.93■□□□□ 0.46
PKP1-204ENST00000475988 KIF1AQ12756 1690 aa17.93■□□□□ 0.46
PKP1-204ENST00000475988 PDE3BQ13370 1112 aa17.91■□□□□ 0.46
PKP1-204ENST00000475988 ILDR2Q71H61 639 aa17.91■□□□□ 0.46
PKP1-204ENST00000475988 POLKQ9UBT6 870 aa17.91■□□□□ 0.46
PKP1-204ENST00000475988 ZRANB1Q9UGI0 708 aa17.91■□□□□ 0.46
PKP1-204ENST00000475988 ZNF521Q96K83 1311 aa17.91■□□□□ 0.46
PKP1-204ENST00000475988 SOCS7O14512 581 aa17.9■□□□□ 0.46
PKP1-204ENST00000475988 PROSER2Q86WR7 435 aaPredicted RBP17.9■□□□□ 0.46
PKP1-204ENST00000475988 COG3Q96JB2 828 aa17.9■□□□□ 0.46
PKP1-204ENST00000475988 PMFBP1Q8TBY8 1022 aa17.89■□□□□ 0.45
PKP1-204ENST00000475988 NUDCQ9Y266 331 aa17.89■□□□□ 0.45
PKP1-204ENST00000475988 TMEM94Q12767 1356 aa17.89■□□□□ 0.45
PKP1-204ENST00000475988 NGEFQ8N5V2 710 aa17.88■□□□□ 0.45
PKP1-204ENST00000475988 NGDNQ8NEJ9 315 aaKnown RBP17.88■□□□□ 0.45
PKP1-204ENST00000475988 RBM33Q96EV2 1170 aaKnown RBP17.88■□□□□ 0.45
PKP1-204ENST00000475988 PHF8Q9UPP1 1060 aa17.88■□□□□ 0.45
PKP1-204ENST00000475988 PEAK1Q9H792 1746 aa17.88■□□□□ 0.45
PKP1-204ENST00000475988 TRPM3Q9HCF6 1732 aaPredicted RBP17.88■□□□□ 0.45
PKP1-204ENST00000475988 MST1RQ04912 1400 aa17.88■□□□□ 0.45
PKP1-204ENST00000475988 C1orf167Q5SNV9 1468 aa17.88■□□□□ 0.45
PKP1-204ENST00000475988 NCBP3Q53F19 620 aaKnown RBP17.87■□□□□ 0.45
PKP1-204ENST00000475988 C19orf44Q9H6X5 657 aa17.87■□□□□ 0.45
PKP1-204ENST00000475988 CERKQ8TCT0 537 aa17.85■□□□□ 0.45
PKP1-204ENST00000475988 RUNDC1Q96C34 613 aa17.84■□□□□ 0.45
PKP1-204ENST00000475988 RGPD1P0DJD0 1748 aa17.84■□□□□ 0.45
PKP1-204ENST00000475988 PHF23Q9BUL5 403 aaPredicted RBP17.83■□□□□ 0.44
PKP1-204ENST00000475988 EMILIN1Q9Y6C2 1016 aa17.83■□□□□ 0.44
PKP1-204ENST00000475988 DIAPH1O60610 1272 aaKnown RBP17.82■□□□□ 0.44
PKP1-204ENST00000475988 FBLN1P23142 703 aa17.82■□□□□ 0.44
PKP1-204ENST00000475988 CCDC146Q8IYE0 955 aa17.82■□□□□ 0.44
PKP1-204ENST00000475988 RNF123Q5XPI4 1314 aa17.81■□□□□ 0.44
PKP1-204ENST00000475988 PHRF1Q9P1Y6 1649 aaKnown RBP17.81■□□□□ 0.44
PKP1-204ENST00000475988 APAF1O14727 1248 aa17.81■□□□□ 0.44
PKP1-204ENST00000475988 C14orf37Q86TY3 774 aa17.81■□□□□ 0.44
PKP1-204ENST00000475988 PLEKHF1Q96S99 279 aa17.81■□□□□ 0.44
PKP1-204ENST00000475988 KIF24Q5T7B8 1368 aa17.8■□□□□ 0.44
PKP1-204ENST00000475988 SENP3-EIF4A1A0A087X0R7 540 aa17.8■□□□□ 0.44
PKP1-204ENST00000475988 IL13P35225 146 aa17.8■□□□□ 0.44
PKP1-204ENST00000475988 NFAT5O94916 1531 aa17.8■□□□□ 0.44
PKP1-204ENST00000475988 ALS2Q96Q42 1657 aa17.8■□□□□ 0.44
PKP1-204ENST00000475988 SLIT3O75094 1523 aa17.79■□□□□ 0.44
PKP1-204ENST00000475988 ESCO1Q5FWF5 840 aa17.79■□□□□ 0.44
PKP1-204ENST00000475988 U2AF1L5P0DN76 240 aaPredicted RBP17.78■□□□□ 0.44
PKP1-204ENST00000475988 U2AF1Q01081 240 aaKnown RBP eCLIP17.78■□□□□ 0.44
PKP1-204ENST00000475988 CCDC27Q2M243 656 aa17.78■□□□□ 0.44
PKP1-204ENST00000475988 ORAI2Q96SN7 254 aa17.78■□□□□ 0.44
PKP1-204ENST00000475988 SBNO1A3KN83 1393 aa17.78■□□□□ 0.44
PKP1-204ENST00000475988 RRS1Q15050 365 aaKnown RBP17.77■□□□□ 0.44
PKP1-204ENST00000475988 TRMT2AQ8IZ69 625 aaKnown RBP17.77■□□□□ 0.44
PKP1-204ENST00000475988 CDCA7LQ96GN5 454 aa17.77■□□□□ 0.44
PKP1-204ENST00000475988 MSH6P52701 1360 aa17.77■□□□□ 0.43
PKP1-204ENST00000475988 TCP11L2Q8N4U5 519 aa17.76■□□□□ 0.43
PKP1-204ENST00000475988 SALL2Q9Y467 1007 aaPredicted RBP17.76■□□□□ 0.43
PKP1-204ENST00000475988 SUPT16HQ9Y5B9 1047 aaKnown RBP17.76■□□□□ 0.43
PKP1-204ENST00000475988 ZNF335Q9H4Z2 1342 aaPredicted RBP17.75■□□□□ 0.43
PKP1-204ENST00000475988 FCHSD2O94868 740 aa17.75■□□□□ 0.43
PKP1-204ENST00000475988 CADPS2Q86UW7 1296 aa17.75■□□□□ 0.43
PKP1-204ENST00000475988 RSPH6AQ9H0K4 717 aa17.75■□□□□ 0.43
PKP1-204ENST00000475988 RTL1A6NKG5 1358 aa17.75■□□□□ 0.43
PKP1-204ENST00000475988 FLT4P35916 1363 aa17.75■□□□□ 0.43
PKP1-204ENST00000475988 MAP3K19Q56UN5 1328 aa17.74■□□□□ 0.43
PKP1-204ENST00000475988 LTN1O94822 1766 aa17.74■□□□□ 0.43
PKP1-204ENST00000475988 ATF3P18847 181 aa17.74■□□□□ 0.43
PKP1-204ENST00000475988 GOLGA2Q08379 1002 aa17.74■□□□□ 0.43
PKP1-204ENST00000475988 U2SURPO15042 1029 aaKnown RBP17.73■□□□□ 0.43
PKP1-204ENST00000475988 NLRP6P59044 892 aa17.73■□□□□ 0.43
PKP1-204ENST00000475988 SLFN5Q08AF3 891 aa17.73■□□□□ 0.43
PKP1-204ENST00000475988 DUSP27Q5VZP5 1158 aa17.73■□□□□ 0.43
PKP1-204ENST00000475988 WWC1Q8IX03 1113 aa17.73■□□□□ 0.43
PKP1-204ENST00000475988 PNNQ9H307 717 aaKnown RBP17.73■□□□□ 0.43
PKP1-204ENST00000475988 PXDNQ92626 1479 aa17.73■□□□□ 0.43
PKP1-204ENST00000475988 USP19O94966 1318 aa17.72■□□□□ 0.43
PKP1-204ENST00000475988 PPM1GO15355 546 aaPredicted RBP17.72■□□□□ 0.43
PKP1-204ENST00000475988 PSME1Q06323 249 aa17.72■□□□□ 0.43
PKP1-204ENST00000475988 ABTB2Q8N961 1025 aa17.72■□□□□ 0.43
PKP1-204ENST00000475988 DMRT2Q9Y5R5 561 aa17.72■□□□□ 0.43
PKP1-204ENST00000475988 CRYBG1Q9Y4K1 1723 aa17.72■□□□□ 0.43
PKP1-204ENST00000475988 EIF4A2Q14240 407 aaKnown RBP17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms