RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 CADPS2Q86UW7 1296 aa9.19□□□□□ -0.94
UBR4-212ENST00000475973 CARD11Q9BXL7 1154 aa9.19□□□□□ -0.94
UBR4-212ENST00000475973 BCL11BQ9C0K0 894 aaPredicted RBP9.19□□□□□ -0.94
UBR4-212ENST00000475973 SETBP1Q9Y6X0 1596 aa9.19□□□□□ -0.94
UBR4-212ENST00000475973 ATF3P18847 181 aa9.18□□□□□ -0.94
UBR4-212ENST00000475973 DCCP43146 1447 aa9.18□□□□□ -0.94
UBR4-212ENST00000475973 SPHKAPQ2M3C7 1700 aa9.18□□□□□ -0.94
UBR4-212ENST00000475973 CHADLQ6NUI6 762 aa9.18□□□□□ -0.94
UBR4-212ENST00000475973 NLRP13Q86W25 1043 aa9.18□□□□□ -0.94
UBR4-212ENST00000475973 STAC3Q96MF2 364 aa9.18□□□□□ -0.94
UBR4-212ENST00000475973 BCL11AQ9H165 835 aa9.18□□□□□ -0.94
UBR4-212ENST00000475973 SLAIN2Q9P270 581 aa9.18□□□□□ -0.94
UBR4-212ENST00000475973 STK24Q9Y6E0 443 aa9.18□□□□□ -0.94
UBR4-212ENST00000475973 NPC1L1Q9UHC9 1359 aa9.17□□□□□ -0.94
UBR4-212ENST00000475973 C19orf44Q9H6X5 657 aa9.17□□□□□ -0.94
UBR4-212ENST00000475973 AMOTL2Q9Y2J4 779 aa9.17□□□□□ -0.94
UBR4-212ENST00000475973 FARP1Q9Y4F1 1045 aaPredicted RBP9.17□□□□□ -0.94
UBR4-212ENST00000475973 MS4A1P11836 297 aa9.16□□□□□ -0.94
UBR4-212ENST00000475973 RYDENQ9NUL5 291 aaKnown RBP9.16□□□□□ -0.94
UBR4-212ENST00000475973 ROBO1Q9Y6N7 1651 aa9.16□□□□□ -0.94
UBR4-212ENST00000475973 CLTCL1P53675 1640 aa9.16□□□□□ -0.94
UBR4-212ENST00000475973 CCDC144AA2RUR9 1427 aa9.15□□□□□ -0.94
UBR4-212ENST00000475973 PTPRUQ92729 1446 aa9.15□□□□□ -0.94
UBR4-212ENST00000475973 JCADQ9P266 1359 aa9.15□□□□□ -0.94
UBR4-212ENST00000475973 RRP1P56182 461 aaKnown RBP9.15□□□□□ -0.94
UBR4-212ENST00000475973 TMC1Q8TDI8 760 aa9.15□□□□□ -0.94
UBR4-212ENST00000475973 TSPYL2Q9H2G4 693 aaPredicted RBP9.15□□□□□ -0.94
UBR4-212ENST00000475973 NEXMIFQ5QGS0 1516 aa9.15□□□□□ -0.95
UBR4-212ENST00000475973 RPGRIP1LQ68CZ1 1315 aa9.14□□□□□ -0.95
UBR4-212ENST00000475973 ZNF521Q96K83 1311 aa9.14□□□□□ -0.95
UBR4-212ENST00000475973 XIRP1Q702N8 1843 aaKnown RBP9.14□□□□□ -0.95
UBR4-212ENST00000475973 METP08581 1390 aa9.13□□□□□ -0.95
UBR4-212ENST00000475973 MYO5BQ9ULV0 1848 aa9.13□□□□□ -0.95
UBR4-212ENST00000475973 TCERG1O14776 1098 aaKnown RBP9.13□□□□□ -0.95
UBR4-212ENST00000475973 ZNF467Q7Z7K2 595 aaPredicted RBP9.13□□□□□ -0.95
UBR4-212ENST00000475973 IPO9Q96P70 1041 aaKnown RBP9.13□□□□□ -0.95
UBR4-212ENST00000475973 NOP58Q9Y2X3 529 aaKnown RBP9.13□□□□□ -0.95
UBR4-212ENST00000475973 XRN1Q8IZH2 1706 aaKnown RBP9.13□□□□□ -0.95
UBR4-212ENST00000475973 PTCH1Q13635 1447 aa9.13□□□□□ -0.95
UBR4-212ENST00000475973 ADGRL3Q9HAR2 1447 aa9.13□□□□□ -0.95
UBR4-212ENST00000475973 CHD2O14647 1828 aaKnown RBP9.12□□□□□ -0.95
UBR4-212ENST00000475973 KIAA1210Q9ULL0 1709 aa9.12□□□□□ -0.95
UBR4-212ENST00000475973 TPRNQ4KMQ1 711 aa9.12□□□□□ -0.95
UBR4-212ENST00000475973 DCAF11Q8TEB1 546 aa9.12□□□□□ -0.95
UBR4-212ENST00000475973 NRXN3Q9Y4C0 1643 aa9.12□□□□□ -0.95
UBR4-212ENST00000475973 SPATA31A6Q5VVP1 1343 aa9.11□□□□□ -0.95
UBR4-212ENST00000475973 NBPF1Q3BBV0 1214 aa9.11□□□□□ -0.95
UBR4-212ENST00000475973 BRINP3Q76B58 766 aa9.11□□□□□ -0.95
UBR4-212ENST00000475973 TRMT2AQ8IZ69 625 aaKnown RBP9.11□□□□□ -0.95
UBR4-212ENST00000475973 AHDC1Q5TGY3 1603 aaPredicted RBP9.11□□□□□ -0.95
UBR4-212ENST00000475973 PIK3C2GO75747 1445 aa9.11□□□□□ -0.95
UBR4-212ENST00000475973 PAK3O75914 559 aaPredicted RBP9.1□□□□□ -0.95
UBR4-212ENST00000475973 PRKAR2AP13861 404 aaKnown RBP9.1□□□□□ -0.95
UBR4-212ENST00000475973 MEX3CQ5U5Q3 659 aaKnown RBP9.1□□□□□ -0.95
UBR4-212ENST00000475973 CCDC136Q96JN2 1154 aa9.1□□□□□ -0.95
UBR4-212ENST00000475973 RCAN3Q9UKA8 241 aa9.1□□□□□ -0.95
UBR4-212ENST00000475973 MST1RQ04912 1400 aa9.1□□□□□ -0.95
UBR4-212ENST00000475973 ASXL1Q8IXJ9 1541 aa9.1□□□□□ -0.95
UBR4-212ENST00000475973 COL16A1Q07092 1604 aaPredicted RBP9.09□□□□□ -0.95
UBR4-212ENST00000475973 PHLPP1O60346 1717 aa9.09□□□□□ -0.95
UBR4-212ENST00000475973 FXR2P51116 673 aaKnown RBP eCLIP9.09□□□□□ -0.954e-15■■■■□ 25.7
UBR4-212ENST00000475973 BACH2Q9BYV9 841 aa9.09□□□□□ -0.95
UBR4-212ENST00000475973 CCDC61Q9Y6R9 512 aa9.09□□□□□ -0.95
UBR4-212ENST00000475973 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.08□□□□□ -0.96
UBR4-212ENST00000475973 KDM2BQ8NHM5 1336 aa9.08□□□□□ -0.96
UBR4-212ENST00000475973 NBR1Q14596 966 aa9.08□□□□□ -0.96
UBR4-212ENST00000475973 NRXN1Q9ULB1 1477 aa9.08□□□□□ -0.96
UBR4-212ENST00000475973 KIF1BO60333 1816 aa9.08□□□□□ -0.96
UBR4-212ENST00000475973 PDAP1Q13442 181 aaKnown RBP9.07□□□□□ -0.96
UBR4-212ENST00000475973 EXOC6Q8TAG9 804 aa9.07□□□□□ -0.96
UBR4-212ENST00000475973 RGS17Q9UGC6 210 aaPredicted RBP9.07□□□□□ -0.96
UBR4-212ENST00000475973 ROBO2Q9HCK4 1378 aa9.07□□□□□ -0.96
UBR4-212ENST00000475973 RGL3Q3MIN7 710 aa9.06□□□□□ -0.96
UBR4-212ENST00000475973 ZNF772Q68DY9 489 aaPredicted RBP9.06□□□□□ -0.96
UBR4-212ENST00000475973 LRRC59Q96AG4 307 aaKnown RBP9.06□□□□□ -0.96
UBR4-212ENST00000475973 SBNO2Q9Y2G9 1366 aa9.06□□□□□ -0.96
UBR4-212ENST00000475973 MYOM2P54296 1465 aa9.06□□□□□ -0.96
UBR4-212ENST00000475973 C1orf167Q5SNV9 1468 aa9.06□□□□□ -0.96
UBR4-212ENST00000475973 MYOM1P52179 1685 aa9.05□□□□□ -0.96
UBR4-212ENST00000475973 TMF1P82094 1093 aa9.05□□□□□ -0.96
UBR4-212ENST00000475973 NGEFQ8N5V2 710 aa9.05□□□□□ -0.96
UBR4-212ENST00000475973 ZNF579Q8NAF0 562 aaKnown RBP9.05□□□□□ -0.96
UBR4-212ENST00000475973 PANK3Q9H999 370 aa9.05□□□□□ -0.96
UBR4-212ENST00000475973 USP35Q9P2H5 1018 aa9.05□□□□□ -0.96
UBR4-212ENST00000475973 PCDHB8Q9UN66 801 aa9.05□□□□□ -0.96
UBR4-212ENST00000475973 PCDHB13Q9Y5F0 798 aa9.05□□□□□ -0.96
UBR4-212ENST00000475973 LRP6O75581 1613 aa9.05□□□□□ -0.96
UBR4-212ENST00000475973 ADGRF5Q8IZF2 1346 aa9.05□□□□□ -0.96
UBR4-212ENST00000475973 PDE4AP27815 886 aa9.04□□□□□ -0.96
UBR4-212ENST00000475973 DUSP27Q5VZP5 1158 aa9.04□□□□□ -0.96
UBR4-212ENST00000475973 POTEAQ6S8J7 498 aa9.04□□□□□ -0.96
UBR4-212ENST00000475973 TECPR2O15040 1411 aa9.04□□□□□ -0.96
UBR4-212ENST00000475973 SHPRHQ149N8 1683 aa9.04□□□□□ -0.96
UBR4-212ENST00000475973 NALCNQ8IZF0 1738 aa9.03□□□□□ -0.96
UBR4-212ENST00000475973 PLEKHH1Q9ULM0 1364 aa9.03□□□□□ -0.96
UBR4-212ENST00000475973 NUTM2BA6NNL0 878 aaPredicted RBP9.03□□□□□ -0.96
UBR4-212ENST00000475973 NUTM2EB1AL46 878 aaPredicted RBP9.03□□□□□ -0.96
UBR4-212ENST00000475973 NUTM2AQ8IVF1 878 aaPredicted RBP9.03□□□□□ -0.96
UBR4-212ENST00000475973 CDCA7LQ96GN5 454 aa9.03□□□□□ -0.96
UBR4-212ENST00000475973 CDC42BPGQ6DT37 1551 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms