RNA–Protein interactions for RNA: ENST00000475693.1

ATG4B-217, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 2,237 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-217ENST00000475693 SENP3-EIF4A1A0A087X0R7 540 aa24.46■■□□□ 1.51
ATG4B-217ENST00000475693 TTC21BQ7Z4L5 1316 aa24.46■■□□□ 1.51
ATG4B-217ENST00000475693 NUTM2GQ5VZR2 741 aa24.45■■□□□ 1.5
ATG4B-217ENST00000475693 MSH6P52701 1360 aa24.45■■□□□ 1.5
ATG4B-217ENST00000475693 USP6P35125 1406 aa24.45■■□□□ 1.5
ATG4B-217ENST00000475693 EDC4Q6P2E9 1401 aaKnown RBP24.45■■□□□ 1.5
ATG4B-217ENST00000475693 NLRP13Q86W25 1043 aa24.45■■□□□ 1.5
ATG4B-217ENST00000475693 ITSN1Q15811 1721 aa24.44■■□□□ 1.5
ATG4B-217ENST00000475693 POLR3AO14802 1390 aaPredicted RBP24.44■■□□□ 1.5
ATG4B-217ENST00000475693 AKAP12Q02952 1782 aa24.44■■□□□ 1.5
ATG4B-217ENST00000475693 C1orf167Q5SNV9 1468 aa24.44■■□□□ 1.5
ATG4B-217ENST00000475693 PAK3O75914 559 aaPredicted RBP24.43■■□□□ 1.5
ATG4B-217ENST00000475693 MST1RQ04912 1400 aa24.43■■□□□ 1.5
ATG4B-217ENST00000475693 PLEKHG5O94827 1062 aa24.42■■□□□ 1.5
ATG4B-217ENST00000475693 MON2Q7Z3U7 1717 aa24.42■■□□□ 1.5
ATG4B-217ENST00000475693 CADPS2Q86UW7 1296 aa24.41■■□□□ 1.5
ATG4B-217ENST00000475693 SOX12O15370 315 aa24.41■■□□□ 1.5
ATG4B-217ENST00000475693 PSME1Q06323 249 aa24.41■■□□□ 1.5
ATG4B-217ENST00000475693 NCOA3Q9Y6Q9 1424 aa24.39■■□□□ 1.5
ATG4B-217ENST00000475693 SSH2Q76I76 1423 aa24.38■■□□□ 1.49
ATG4B-217ENST00000475693 BRD4O60885 1362 aaPredicted RBP24.38■■□□□ 1.49
ATG4B-217ENST00000475693 MTHFSP49914 203 aa24.38■■□□□ 1.49
ATG4B-217ENST00000475693 PNISRQ8TF01 805 aaKnown RBP24.38■■□□□ 1.49
ATG4B-217ENST00000475693 SLAIN2Q9P270 581 aa24.36■■□□□ 1.49
ATG4B-217ENST00000475693 NSD2O96028 1365 aa24.36■■□□□ 1.49
ATG4B-217ENST00000475693 KIF20BQ96Q89 1820 aa24.36■■□□□ 1.49
ATG4B-217ENST00000475693 NRKQ7Z2Y5 1582 aa24.35■■□□□ 1.49
ATG4B-217ENST00000475693 COG3Q96JB2 828 aa24.35■■□□□ 1.49
ATG4B-217ENST00000475693 DCCP43146 1447 aa24.34■■□□□ 1.49
ATG4B-217ENST00000475693 PPM1GO15355 546 aaPredicted RBP24.34■■□□□ 1.49
ATG4B-217ENST00000475693 ABTB2Q8N961 1025 aa24.34■■□□□ 1.49
ATG4B-217ENST00000475693 LTBP4Q8N2S1 1624 aa24.33■■□□□ 1.49
ATG4B-217ENST00000475693 RRS1Q15050 365 aaKnown RBP24.33■■□□□ 1.49
ATG4B-217ENST00000475693 LMOD2Q6P5Q4 547 aa24.33■■□□□ 1.49
ATG4B-217ENST00000475693 BRINP3Q76B58 766 aa24.33■■□□□ 1.48
ATG4B-217ENST00000475693 KRT28Q7Z3Y7 464 aa24.33■■□□□ 1.48
ATG4B-217ENST00000475693 NLRP6P59044 892 aa24.32■■□□□ 1.48
ATG4B-217ENST00000475693 EMILIN1Q9Y6C2 1016 aa24.31■■□□□ 1.48
ATG4B-217ENST00000475693 POLKQ9UBT6 870 aa24.29■■□□□ 1.48
ATG4B-217ENST00000475693 TTC21AQ8NDW8 1320 aa24.28■■□□□ 1.48
ATG4B-217ENST00000475693 ANKRD26Q9UPS8 1709 aa24.27■■□□□ 1.48
ATG4B-217ENST00000475693 PIK3C2AO00443 1686 aa24.27■■□□□ 1.48
ATG4B-217ENST00000475693 ADAMTS8Q9UP79 889 aa24.26■■□□□ 1.47
ATG4B-217ENST00000475693 OVOS2A0A0J9YW53 1432 aa24.26■■□□□ 1.47
ATG4B-217ENST00000475693 OVOS2Q6IE36 1432 aa24.26■■□□□ 1.47
ATG4B-217ENST00000475693 HNRNPUQ00839 825 aaKnown RBP eCLIP24.25■■□□□ 1.47
ATG4B-217ENST00000475693 MAP2P11137 1827 aaKnown RBP24.22■■□□□ 1.47
ATG4B-217ENST00000475693 SALL2Q9Y467 1007 aaPredicted RBP24.2■■□□□ 1.46
ATG4B-217ENST00000475693 NPHP3Q7Z494 1330 aa24.19■■□□□ 1.46
ATG4B-217ENST00000475693 WDR43Q15061 677 aaKnown RBP eCLIP24.19■■□□□ 1.46
ATG4B-217ENST00000475693 CCDC146Q8IYE0 955 aa24.19■■□□□ 1.46
ATG4B-217ENST00000475693 CABLES1Q8TDN4 633 aa24.19■■□□□ 1.46
ATG4B-217ENST00000475693 USP31Q70CQ4 1352 aa24.19■■□□□ 1.46
ATG4B-217ENST00000475693 KIF1AQ12756 1690 aa24.19■■□□□ 1.46
ATG4B-217ENST00000475693 ZBTB7CA1YPR0 619 aa24.18■■□□□ 1.46
ATG4B-217ENST00000475693 MARF1Q9Y4F3 1742 aaKnown RBP24.17■■□□□ 1.46
ATG4B-217ENST00000475693 PIP4K2BP78356 416 aa24.16■■□□□ 1.46
ATG4B-217ENST00000475693 MAP3K19Q56UN5 1328 aa24.16■■□□□ 1.46
ATG4B-217ENST00000475693 CFAP53Q96M91 514 aa24.16■■□□□ 1.46
ATG4B-217ENST00000475693 TRPM3Q9HCF6 1732 aaPredicted RBP24.16■■□□□ 1.46
ATG4B-217ENST00000475693 AATKQ6ZMQ8 1374 aa24.15■■□□□ 1.46
ATG4B-217ENST00000475693 U2SURPO15042 1029 aaKnown RBP24.15■■□□□ 1.46
ATG4B-217ENST00000475693 HSP90AB2PQ58FF8 381 aa24.15■■□□□ 1.46
ATG4B-217ENST00000475693 PXDNQ92626 1479 aa24.14■■□□□ 1.46
ATG4B-217ENST00000475693 COL3A1P02461 1466 aaPredicted RBP24.12■■□□□ 1.45
ATG4B-217ENST00000475693 DIAPH1O60610 1272 aaKnown RBP24.11■■□□□ 1.45
ATG4B-217ENST00000475693 U2AF1L5P0DN76 240 aaPredicted RBP24.11■■□□□ 1.45
ATG4B-217ENST00000475693 U2AF1Q01081 240 aaKnown RBP eCLIP24.11■■□□□ 1.45
ATG4B-217ENST00000475693 PNPLA6Q8IY17 1366 aa24.11■■□□□ 1.45
ATG4B-217ENST00000475693 SHPRHQ149N8 1683 aa24.11■■□□□ 1.45
ATG4B-217ENST00000475693 SPATA31A3Q5VYP0 1347 aa24.11■■□□□ 1.45
ATG4B-217ENST00000475693 GCP02774 474 aa24.11■■□□□ 1.45
ATG4B-217ENST00000475693 PEAK1Q9H792 1746 aa24.1■■□□□ 1.45
ATG4B-217ENST00000475693 SOS2Q07890 1332 aaPredicted RBP24.1■■□□□ 1.45
ATG4B-217ENST00000475693 AMPHP49418 695 aa24.09■■□□□ 1.45
ATG4B-217ENST00000475693 ZC3H6P61129 1189 aaKnown RBP24.09■■□□□ 1.45
ATG4B-217ENST00000475693 UBAP1LF5GYI3 381 aa24.08■■□□□ 1.45
ATG4B-217ENST00000475693 SBNO1A3KN83 1393 aa24.08■■□□□ 1.44
ATG4B-217ENST00000475693 TNS3Q68CZ2 1445 aa24.07■■□□□ 1.44
ATG4B-217ENST00000475693 ROBO1Q9Y6N7 1651 aa24.07■■□□□ 1.44
ATG4B-217ENST00000475693 IL13P35225 146 aa24.07■■□□□ 1.44
ATG4B-217ENST00000475693 LTV1Q96GA3 475 aaPredicted RBP24.07■■□□□ 1.44
ATG4B-217ENST00000475693 ALS2Q96Q42 1657 aa24.06■■□□□ 1.44
ATG4B-217ENST00000475693 HMOX1P09601 288 aa24.06■■□□□ 1.44
ATG4B-217ENST00000475693 EIF4A2Q14240 407 aaKnown RBP24.06■■□□□ 1.44
ATG4B-217ENST00000475693 SMG6Q86US8 1419 aaKnown RBP24.06■■□□□ 1.44
ATG4B-217ENST00000475693 MED1Q15648 1581 aaPredicted RBP24.05■■□□□ 1.44
ATG4B-217ENST00000475693 USP19O94966 1318 aa24.04■■□□□ 1.44
ATG4B-217ENST00000475693 TOM1O60784 492 aa24.04■■□□□ 1.44
ATG4B-217ENST00000475693 HOXC9P31274 260 aa24.04■■□□□ 1.44
ATG4B-217ENST00000475693 CDK12Q9NYV4 1490 aaPredicted RBP24.03■■□□□ 1.44
ATG4B-217ENST00000475693 APAF1O14727 1248 aa24.03■■□□□ 1.44
ATG4B-217ENST00000475693 NFAT5O94916 1531 aa24.03■■□□□ 1.44
ATG4B-217ENST00000475693 NUDCQ9Y266 331 aa24.03■■□□□ 1.44
ATG4B-217ENST00000475693 INSRP06213 1382 aa24.02■■□□□ 1.44
ATG4B-217ENST00000475693 KCNH5Q8NCM2 988 aa24.02■■□□□ 1.44
ATG4B-217ENST00000475693 CERKQ8TCT0 537 aa24.02■■□□□ 1.44
ATG4B-217ENST00000475693 RRP7AQ9Y3A4 280 aaKnown RBP24.02■■□□□ 1.44
ATG4B-217ENST00000475693 BLMP54132 1417 aaPredicted RBP24.02■■□□□ 1.44
ATG4B-217ENST00000475693 NEUROD2Q15784 382 aa24.01■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms