RNA–Protein interactions for RNA: ENST00000475635.1

CCDC57-208, Transcript of coiled-coil domain containing 57, humanhuman

TSL 4

Gene CCDC57, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-208ENST00000475635 KRT27Q7Z3Y8 459 aa18.2■□□□□ 0.5
CCDC57-208ENST00000475635 STAC3Q96MF2 364 aa18.2■□□□□ 0.5
CCDC57-208ENST00000475635 A0A0G2JS52 829 aa18.19■□□□□ 0.5
CCDC57-208ENST00000475635 MYT1Q01538 1121 aa18.19■□□□□ 0.5
CCDC57-208ENST00000475635 BTG4Q9NY30 223 aa18.19■□□□□ 0.5
CCDC57-208ENST00000475635 NGDNQ8NEJ9 315 aaKnown RBP18.18■□□□□ 0.5
CCDC57-208ENST00000475635 PHRF1Q9P1Y6 1649 aaKnown RBP18.17■□□□□ 0.5
CCDC57-208ENST00000475635 PAK3O75914 559 aaPredicted RBP18.17■□□□□ 0.5
CCDC57-208ENST00000475635 FAM98CQ17RN3 349 aaKnown RBP18.17■□□□□ 0.5
CCDC57-208ENST00000475635 ATP7BP35670 1465 aa18.17■□□□□ 0.5
CCDC57-208ENST00000475635 RGPD1P0DJD0 1748 aa18.17■□□□□ 0.5
CCDC57-208ENST00000475635 KIAA1210Q9ULL0 1709 aa18.17■□□□□ 0.5
CCDC57-208ENST00000475635 TOPAZ1Q8N9V7 1692 aa18.16■□□□□ 0.5
CCDC57-208ENST00000475635 HRCP23327 699 aa18.15■□□□□ 0.5
CCDC57-208ENST00000475635 NUDT16Q96DE0 195 aaKnown RBP18.14■□□□□ 0.49
CCDC57-208ENST00000475635 THSD7AQ9UPZ6 1657 aa18.14■□□□□ 0.49
CCDC57-208ENST00000475635 SPATA31A5Q5VU36 1347 aa18.13■□□□□ 0.49
CCDC57-208ENST00000475635 SPATA31A7Q8IWB4 1347 aa18.13■□□□□ 0.49
CCDC57-208ENST00000475635 PRDM11Q9NQV5 511 aa18.12■□□□□ 0.49
CCDC57-208ENST00000475635 TNS1Q9HBL0 1735 aaKnown RBP18.12■□□□□ 0.49
CCDC57-208ENST00000475635 LRP5O75197 1615 aa18.11■□□□□ 0.49
CCDC57-208ENST00000475635 CDK19Q9BWU1 502 aa18.1■□□□□ 0.49
CCDC57-208ENST00000475635 KIAA0232Q92628 1395 aa18.09■□□□□ 0.49
CCDC57-208ENST00000475635 BAG6P46379 1132 aa18.09■□□□□ 0.49
CCDC57-208ENST00000475635 FAM182BQ5T319 152 aa18.08■□□□□ 0.48
CCDC57-208ENST00000475635 POLR3AO14802 1390 aaPredicted RBP18.07■□□□□ 0.48
CCDC57-208ENST00000475635 CHRNA2Q15822 529 aa18.07■□□□□ 0.48
CCDC57-208ENST00000475635 NUTM2GQ5VZR2 741 aa18.07■□□□□ 0.48
CCDC57-208ENST00000475635 ACEP12821 1306 aa18.06■□□□□ 0.48
CCDC57-208ENST00000475635 SPATA31A1Q5TZJ5 1347 aa18.06■□□□□ 0.48
CCDC57-208ENST00000475635 NRKQ7Z2Y5 1582 aa18.06■□□□□ 0.48
CCDC57-208ENST00000475635 NBPF8Q3BBV2 869 aa18.05■□□□□ 0.48
CCDC57-208ENST00000475635 STRN4Q9NRL3 753 aa18.05■□□□□ 0.48
CCDC57-208ENST00000475635 CCDC61Q9Y6R9 512 aa18.05■□□□□ 0.48
CCDC57-208ENST00000475635 QRICH2Q9H0J4 1663 aa18.05■□□□□ 0.48
CCDC57-208ENST00000475635 PSDA5PKW4 1024 aaPredicted RBP18.04■□□□□ 0.48
CCDC57-208ENST00000475635 ZC3H6P61129 1189 aaKnown RBP18.04■□□□□ 0.48
CCDC57-208ENST00000475635 EN1Q05925 392 aaPredicted RBP18.04■□□□□ 0.48
CCDC57-208ENST00000475635 PLEKHG3A1L390 1219 aa18.03■□□□□ 0.48
CCDC57-208ENST00000475635 NBPF1Q3BBV0 1214 aa18.03■□□□□ 0.48
CCDC57-208ENST00000475635 LMO7Q8WWI1 1683 aa18.03■□□□□ 0.48
CCDC57-208ENST00000475635 DISP2A7MBM2 1401 aa18.02■□□□□ 0.48
CCDC57-208ENST00000475635 ABTB2Q8N961 1025 aa18.01■□□□□ 0.47
CCDC57-208ENST00000475635 CAMTA1Q9Y6Y1 1673 aa18.01■□□□□ 0.47
CCDC57-208ENST00000475635 SSH2Q76I76 1423 aa18■□□□□ 0.47
CCDC57-208ENST00000475635 EVA1CP58658 441 aa18■□□□□ 0.47
CCDC57-208ENST00000475635 USP35Q9P2H5 1018 aa18■□□□□ 0.47
CCDC57-208ENST00000475635 PPIP5K1Q6PFW1 1433 aa17.99■□□□□ 0.47
CCDC57-208ENST00000475635 SRPK2P78362 688 aaKnown RBP17.99■□□□□ 0.47
CCDC57-208ENST00000475635 FAM196AQ6ZSG2 479 aa17.98■□□□□ 0.47
CCDC57-208ENST00000475635 CPDO75976 1380 aa17.98■□□□□ 0.47
CCDC57-208ENST00000475635 USP19O94966 1318 aa17.98■□□□□ 0.47
CCDC57-208ENST00000475635 CENPJQ9HC77 1338 aaPredicted RBP17.98■□□□□ 0.47
CCDC57-208ENST00000475635 TRIM37O94972 964 aa17.97■□□□□ 0.47
CCDC57-208ENST00000475635 PARP4Q9UKK3 1724 aaKnown RBP17.97■□□□□ 0.47
CCDC57-208ENST00000475635 RREB1Q92766 1687 aa17.96■□□□□ 0.47
CCDC57-208ENST00000475635 EZH2Q15910 746 aaKnown RBP17.96■□□□□ 0.47
CCDC57-208ENST00000475635 LARP1Q6PKG0 1096 aaKnown RBP17.96■□□□□ 0.47
CCDC57-208ENST00000475635 BARGINQ6ZT62 677 aa17.96■□□□□ 0.47
CCDC57-208ENST00000475635 CABP2Q9NPB3 220 aa17.96■□□□□ 0.47
CCDC57-208ENST00000475635 R3HDM1Q15032 1099 aaKnown RBP17.95■□□□□ 0.46
CCDC57-208ENST00000475635 NLRP13Q86W25 1043 aa17.95■□□□□ 0.46
CCDC57-208ENST00000475635 NUP188Q5SRE5 1749 aa17.95■□□□□ 0.46
CCDC57-208ENST00000475635 SBF2Q86WG5 1849 aa17.94■□□□□ 0.46
CCDC57-208ENST00000475635 GCP02774 474 aa17.94■□□□□ 0.46
CCDC57-208ENST00000475635 PDE3BQ13370 1112 aa17.94■□□□□ 0.46
CCDC57-208ENST00000475635 TCP11L2Q8N4U5 519 aa17.94■□□□□ 0.46
CCDC57-208ENST00000475635 TRPM1Q7Z4N2 1603 aa17.94■□□□□ 0.46
CCDC57-208ENST00000475635 APBA3O96018 575 aa17.93■□□□□ 0.46
CCDC57-208ENST00000475635 CAMKK2Q96RR4 588 aa17.93■□□□□ 0.46
CCDC57-208ENST00000475635 RGPD5Q99666 1765 aa17.93■□□□□ 0.46
CCDC57-208ENST00000475635 COL5A2P05997 1499 aaPredicted RBP17.93■□□□□ 0.46
CCDC57-208ENST00000475635 WNK3Q9BYP7 1800 aa17.93■□□□□ 0.46
CCDC57-208ENST00000475635 PIK3C2AO00443 1686 aa17.93■□□□□ 0.46
CCDC57-208ENST00000475635 BRD4O60885 1362 aaPredicted RBP17.92■□□□□ 0.46
CCDC57-208ENST00000475635 AKAP12Q02952 1782 aa17.92■□□□□ 0.46
CCDC57-208ENST00000475635 PARD3Q8TEW0 1356 aa17.91■□□□□ 0.46
CCDC57-208ENST00000475635 COL18A1P39060 1754 aa17.91■□□□□ 0.46
CCDC57-208ENST00000475635 USP6P35125 1406 aa17.91■□□□□ 0.46
CCDC57-208ENST00000475635 THRAP3Q9Y2W1 955 aaKnown RBP17.91■□□□□ 0.46
CCDC57-208ENST00000475635 SLIT3O75094 1523 aa17.9■□□□□ 0.46
CCDC57-208ENST00000475635 CABP1Q9NZU7 370 aa17.9■□□□□ 0.46
CCDC57-208ENST00000475635 L3MBTL2Q969R5 705 aa17.89■□□□□ 0.45
CCDC57-208ENST00000475635 CRB1P82279 1406 aa17.89■□□□□ 0.45
CCDC57-208ENST00000475635 LRRC37A3O60309 1634 aa17.88■□□□□ 0.45
CCDC57-208ENST00000475635 ZBTB7CA1YPR0 619 aa17.88■□□□□ 0.45
CCDC57-208ENST00000475635 NLRP6P59044 892 aa17.88■□□□□ 0.45
CCDC57-208ENST00000475635 PEAK1Q9H792 1746 aa17.88■□□□□ 0.45
CCDC57-208ENST00000475635 RGPD3A6NKT7 1758 aaPredicted RBP17.86■□□□□ 0.45
CCDC57-208ENST00000475635 RGPD4Q7Z3J3 1758 aa17.86■□□□□ 0.45
CCDC57-208ENST00000475635 EVC2Q86UK5 1308 aa17.86■□□□□ 0.45
CCDC57-208ENST00000475635 AATKQ6ZMQ8 1374 aa17.86■□□□□ 0.45
CCDC57-208ENST00000475635 SIN3AQ96ST3 1273 aa17.83■□□□□ 0.44
CCDC57-208ENST00000475635 MON2Q7Z3U7 1717 aa17.83■□□□□ 0.44
CCDC57-208ENST00000475635 OVOS2A0A0G2JMS6 1433 aa17.82■□□□□ 0.44
CCDC57-208ENST00000475635 OVOS2A0A0J9YW53 1432 aa17.82■□□□□ 0.44
CCDC57-208ENST00000475635 OVOS2Q6IE36 1432 aa17.82■□□□□ 0.44
CCDC57-208ENST00000475635 ROCK2O75116 1388 aaKnown RBP17.82■□□□□ 0.44
CCDC57-208ENST00000475635 NBPF14Q5TI25 921 aa17.82■□□□□ 0.44
CCDC57-208ENST00000475635 TOM1L2Q6ZVM7 507 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms