RNA–Protein interactions for RNA: ENST00000475605.1

CDPF1-206, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

TSL 2

Gene CDPF1, Length 655 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-206ENST00000475605 NGDNQ8NEJ9 315 aaKnown RBP23.1■■□□□ 1.29
CDPF1-206ENST00000475605 COL14A1Q05707 1796 aaKnown RBP23.09■■□□□ 1.29
CDPF1-206ENST00000475605 PAK3O75914 559 aaPredicted RBP23.09■■□□□ 1.29
CDPF1-206ENST00000475605 EIF3AQ14152 1382 aaKnown RBP23.09■■□□□ 1.29
CDPF1-206ENST00000475605 FAM182BQ5T319 152 aa23.08■■□□□ 1.29
CDPF1-206ENST00000475605 CRYBG1Q9Y4K1 1723 aa23.07■■□□□ 1.28
CDPF1-206ENST00000475605 SPATA31A5Q5VU36 1347 aa23.05■■□□□ 1.28
CDPF1-206ENST00000475605 SPATA31A7Q8IWB4 1347 aa23.05■■□□□ 1.28
CDPF1-206ENST00000475605 PSDA5PKW4 1024 aaPredicted RBP23.04■■□□□ 1.28
CDPF1-206ENST00000475605 NUDT16Q96DE0 195 aaKnown RBP23.04■■□□□ 1.28
CDPF1-206ENST00000475605 ARHGEF28Q8N1W1 1705 aaKnown RBP23.04■■□□□ 1.28
CDPF1-206ENST00000475605 BAG6P46379 1132 aa23.03■■□□□ 1.28
CDPF1-206ENST00000475605 PRDM11Q9NQV5 511 aa23.03■■□□□ 1.28
CDPF1-206ENST00000475605 ATP7BP35670 1465 aa23.03■■□□□ 1.28
CDPF1-206ENST00000475605 STAC3Q96MF2 364 aa23.02■■□□□ 1.28
CDPF1-206ENST00000475605 EN1Q05925 392 aaPredicted RBP23.01■■□□□ 1.27
CDPF1-206ENST00000475605 CHRNA2Q15822 529 aa23.01■■□□□ 1.27
CDPF1-206ENST00000475605 NUTM2GQ5VZR2 741 aa23■■□□□ 1.27
CDPF1-206ENST00000475605 KIAA0232Q92628 1395 aa23■■□□□ 1.27
CDPF1-206ENST00000475605 CDK19Q9BWU1 502 aa22.99■■□□□ 1.27
CDPF1-206ENST00000475605 THSD7AQ9UPZ6 1657 aa22.99■■□□□ 1.27
CDPF1-206ENST00000475605 ITSN1Q15811 1721 aa22.99■■□□□ 1.27
CDPF1-206ENST00000475605 ZC3H6P61129 1189 aaKnown RBP22.97■■□□□ 1.27
CDPF1-206ENST00000475605 STRN4Q9NRL3 753 aa22.97■■□□□ 1.27
CDPF1-206ENST00000475605 RGPD1P0DJD0 1748 aa22.96■■□□□ 1.27
CDPF1-206ENST00000475605 SPATA31A1Q5TZJ5 1347 aa22.96■■□□□ 1.27
CDPF1-206ENST00000475605 LRP5O75197 1615 aa22.96■■□□□ 1.27
CDPF1-206ENST00000475605 PHRF1Q9P1Y6 1649 aaKnown RBP22.96■■□□□ 1.27
CDPF1-206ENST00000475605 HRCP23327 699 aa22.95■■□□□ 1.26
CDPF1-206ENST00000475605 ACEP12821 1306 aa22.94■■□□□ 1.26
CDPF1-206ENST00000475605 NBPF8Q3BBV2 869 aa22.94■■□□□ 1.26
CDPF1-206ENST00000475605 POLR3AO14802 1390 aaPredicted RBP22.92■■□□□ 1.26
CDPF1-206ENST00000475605 TNS1Q9HBL0 1735 aaKnown RBP22.92■■□□□ 1.26
CDPF1-206ENST00000475605 TOPAZ1Q8N9V7 1692 aa22.92■■□□□ 1.26
CDPF1-206ENST00000475605 EZH2Q15910 746 aaKnown RBP22.91■■□□□ 1.26
CDPF1-206ENST00000475605 NBPF1Q3BBV0 1214 aa22.91■■□□□ 1.26
CDPF1-206ENST00000475605 USP35Q9P2H5 1018 aa22.91■■□□□ 1.26
CDPF1-206ENST00000475605 CCDC61Q9Y6R9 512 aa22.91■■□□□ 1.26
CDPF1-206ENST00000475605 R3HDM1Q15032 1099 aaKnown RBP22.9■■□□□ 1.26
CDPF1-206ENST00000475605 PLEKHG3A1L390 1219 aa22.89■■□□□ 1.25
CDPF1-206ENST00000475605 TRIM37O94972 964 aa22.89■■□□□ 1.25
CDPF1-206ENST00000475605 DISP2A7MBM2 1401 aa22.89■■□□□ 1.25
CDPF1-206ENST00000475605 EVA1CP58658 441 aa22.88■■□□□ 1.25
CDPF1-206ENST00000475605 ABTB2Q8N961 1025 aa22.88■■□□□ 1.25
CDPF1-206ENST00000475605 SSH2Q76I76 1423 aa22.87■■□□□ 1.25
CDPF1-206ENST00000475605 CAMTA1Q9Y6Y1 1673 aa22.87■■□□□ 1.25
CDPF1-206ENST00000475605 KIAA1210Q9ULL0 1709 aa22.86■■□□□ 1.25
CDPF1-206ENST00000475605 NRKQ7Z2Y5 1582 aa22.86■■□□□ 1.25
CDPF1-206ENST00000475605 LARP1Q6PKG0 1096 aaKnown RBP22.86■■□□□ 1.25
CDPF1-206ENST00000475605 FAM196AQ6ZSG2 479 aa22.86■■□□□ 1.25
CDPF1-206ENST00000475605 CAMKK2Q96RR4 588 aa22.86■■□□□ 1.25
CDPF1-206ENST00000475605 BARGINQ6ZT62 677 aa22.84■■□□□ 1.25
CDPF1-206ENST00000475605 APBA3O96018 575 aa22.83■■□□□ 1.25
CDPF1-206ENST00000475605 SRPK2P78362 688 aaKnown RBP22.83■■□□□ 1.25
CDPF1-206ENST00000475605 CABP2Q9NPB3 220 aa22.83■■□□□ 1.25
CDPF1-206ENST00000475605 USP19O94966 1318 aa22.82■■□□□ 1.24
CDPF1-206ENST00000475605 PPIP5K1Q6PFW1 1433 aa22.82■■□□□ 1.24
CDPF1-206ENST00000475605 LMO7Q8WWI1 1683 aa22.81■■□□□ 1.24
CDPF1-206ENST00000475605 CPDO75976 1380 aa22.81■■□□□ 1.24
CDPF1-206ENST00000475605 PDE3BQ13370 1112 aa22.81■■□□□ 1.24
CDPF1-206ENST00000475605 GCP02774 474 aa22.8■■□□□ 1.24
CDPF1-206ENST00000475605 TCP11L2Q8N4U5 519 aa22.8■■□□□ 1.24
CDPF1-206ENST00000475605 CENPJQ9HC77 1338 aaPredicted RBP22.8■■□□□ 1.24
CDPF1-206ENST00000475605 NLRP13Q86W25 1043 aa22.79■■□□□ 1.24
CDPF1-206ENST00000475605 ZBTB7CA1YPR0 619 aa22.76■■□□□ 1.23
CDPF1-206ENST00000475605 COL5A2P05997 1499 aaPredicted RBP22.75■■□□□ 1.23
CDPF1-206ENST00000475605 CABP1Q9NZU7 370 aa22.75■■□□□ 1.23
CDPF1-206ENST00000475605 PARD3Q8TEW0 1356 aa22.74■■□□□ 1.23
CDPF1-206ENST00000475605 THRAP3Q9Y2W1 955 aaKnown RBP22.73■■□□□ 1.23
CDPF1-206ENST00000475605 RREB1Q92766 1687 aa22.73■■□□□ 1.23
CDPF1-206ENST00000475605 QRICH2Q9H0J4 1663 aa22.73■■□□□ 1.23
CDPF1-206ENST00000475605 NLRP6P59044 892 aa22.72■■□□□ 1.23
CDPF1-206ENST00000475605 USP6P35125 1406 aa22.72■■□□□ 1.23
CDPF1-206ENST00000475605 NUP188Q5SRE5 1749 aa22.71■■□□□ 1.23
CDPF1-206ENST00000475605 BRD4O60885 1362 aaPredicted RBP22.7■■□□□ 1.22
CDPF1-206ENST00000475605 CRB1P82279 1406 aa22.7■■□□□ 1.22
CDPF1-206ENST00000475605 PARP4Q9UKK3 1724 aaKnown RBP22.7■■□□□ 1.22
CDPF1-206ENST00000475605 L3MBTL2Q969R5 705 aa22.69■■□□□ 1.22
CDPF1-206ENST00000475605 SLIT3O75094 1523 aa22.68■■□□□ 1.22
CDPF1-206ENST00000475605 AATKQ6ZMQ8 1374 aa22.67■■□□□ 1.22
CDPF1-206ENST00000475605 NBPF14Q5TI25 921 aa22.67■■□□□ 1.22
CDPF1-206ENST00000475605 AXIN2Q9Y2T1 843 aa22.66■■□□□ 1.22
CDPF1-206ENST00000475605 PIK3C2AO00443 1686 aa22.65■■□□□ 1.22
CDPF1-206ENST00000475605 COL18A1P39060 1754 aa22.65■■□□□ 1.22
CDPF1-206ENST00000475605 PEAK1Q9H792 1746 aa22.65■■□□□ 1.22
CDPF1-206ENST00000475605 TOM1L2Q6ZVM7 507 aa22.64■■□□□ 1.21
CDPF1-206ENST00000475605 LRRC37A3O60309 1634 aa22.64■■□□□ 1.21
CDPF1-206ENST00000475605 PTF1AQ7RTS3 328 aa22.63■■□□□ 1.21
CDPF1-206ENST00000475605 SIN3AQ96ST3 1273 aa22.63■■□□□ 1.21
CDPF1-206ENST00000475605 OVOS2A0A0G2JMS6 1433 aa22.63■■□□□ 1.21
CDPF1-206ENST00000475605 OVOS2A0A0J9YW53 1432 aa22.63■■□□□ 1.21
CDPF1-206ENST00000475605 OVOS2Q6IE36 1432 aa22.63■■□□□ 1.21
CDPF1-206ENST00000475605 EVC2Q86UK5 1308 aa22.62■■□□□ 1.21
CDPF1-206ENST00000475605 DDB1Q16531 1140 aa22.62■■□□□ 1.21
CDPF1-206ENST00000475605 TRPM1Q7Z4N2 1603 aa22.61■■□□□ 1.21
CDPF1-206ENST00000475605 SBF2Q86WG5 1849 aa22.61■■□□□ 1.21
CDPF1-206ENST00000475605 TTC21BQ7Z4L5 1316 aa22.6■■□□□ 1.21
CDPF1-206ENST00000475605 SOX12O15370 315 aa22.6■■□□□ 1.21
CDPF1-206ENST00000475605 WDR17Q8IZU2 1322 aa22.59■■□□□ 1.21
CDPF1-206ENST00000475605 C11orf95C9JLR9 678 aaPredicted RBP22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms