RNA–Protein interactions for RNA: ENST00000475460.6

COMMD3-BMI1-203, Transcript of COMMD3-BMI1 readthrough, humanhuman

TSL 2

Gene COMMD3-BMI1, Length 508 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1-203ENST00000475460 ZNF326Q5BKZ1 582 aaKnown RBP11.42□□□□□ -0.58
COMMD3-BMI1-203ENST00000475460 BRINP3Q76B58 766 aa11.42□□□□□ -0.58
COMMD3-BMI1-203ENST00000475460 NUTM2AQ8IVF1 878 aaPredicted RBP11.42□□□□□ -0.58
COMMD3-BMI1-203ENST00000475460 TMEM131LA2VDJ0 1609 aa11.42□□□□□ -0.58
COMMD3-BMI1-203ENST00000475460 PHLPP1O60346 1717 aa11.41□□□□□ -0.58
COMMD3-BMI1-203ENST00000475460 RXRBP28702 533 aa11.41□□□□□ -0.58
COMMD3-BMI1-203ENST00000475460 KCNV2Q8TDN2 545 aa11.41□□□□□ -0.58
COMMD3-BMI1-203ENST00000475460 L3MBTL3Q96JM7 780 aaPredicted RBP11.4□□□□□ -0.58
COMMD3-BMI1-203ENST00000475460 LARP6Q9BRS8 491 aaKnown RBP11.4□□□□□ -0.58
COMMD3-BMI1-203ENST00000475460 TMEM121BQ9BXQ6 578 aaPredicted RBP11.4□□□□□ -0.58
COMMD3-BMI1-203ENST00000475460 MFSD10Q14728 455 aa11.39□□□□□ -0.59
COMMD3-BMI1-203ENST00000475460 UPF1Q92900 1129 aaKnown RBP eCLIP11.39□□□□□ -0.59
COMMD3-BMI1-203ENST00000475460 WDR70Q9NW82 654 aa11.39□□□□□ -0.59
COMMD3-BMI1-203ENST00000475460 LRP6O75581 1613 aa11.38□□□□□ -0.59
COMMD3-BMI1-203ENST00000475460 PTPRUQ92729 1446 aa11.38□□□□□ -0.59
COMMD3-BMI1-203ENST00000475460 LRRC59Q96AG4 307 aaKnown RBP11.38□□□□□ -0.59
COMMD3-BMI1-203ENST00000475460 GCC2Q8IWJ2 1684 aa11.38□□□□□ -0.59
COMMD3-BMI1-203ENST00000475460 COL16A1Q07092 1604 aaPredicted RBP11.38□□□□□ -0.59
COMMD3-BMI1-203ENST00000475460 DIP2AQ14689 1571 aa11.37□□□□□ -0.59
COMMD3-BMI1-203ENST00000475460 CHD2O14647 1828 aaKnown RBP11.37□□□□□ -0.59
COMMD3-BMI1-203ENST00000475460 TRPM2O94759 1503 aa11.37□□□□□ -0.59
COMMD3-BMI1-203ENST00000475460 BOLA1Q9Y3E2 137 aa11.37□□□□□ -0.59
COMMD3-BMI1-203ENST00000475460 UNC13BO14795 1591 aa11.37□□□□□ -0.59
COMMD3-BMI1-203ENST00000475460 PDE4AP27815 886 aa11.36□□□□□ -0.59
COMMD3-BMI1-203ENST00000475460 PPARGC1BQ86YN6 1023 aaKnown RBP11.36□□□□□ -0.59
COMMD3-BMI1-203ENST00000475460 C8orf37Q96NL8 207 aa11.36□□□□□ -0.59
COMMD3-BMI1-203ENST00000475460 AFF2P51816 1311 aa11.35□□□□□ -0.59
COMMD3-BMI1-203ENST00000475460 DCCP43146 1447 aa11.35□□□□□ -0.59
COMMD3-BMI1-203ENST00000475460 AHDC1Q5TGY3 1603 aaPredicted RBP11.35□□□□□ -0.59
COMMD3-BMI1-203ENST00000475460 METP08581 1390 aa11.35□□□□□ -0.59
COMMD3-BMI1-203ENST00000475460 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.35□□□□□ -0.59
COMMD3-BMI1-203ENST00000475460 E9PCH4 1651 aa11.34□□□□□ -0.59
COMMD3-BMI1-203ENST00000475460 DDX17Q92841 729 aaKnown RBP11.34□□□□□ -0.59
COMMD3-BMI1-203ENST00000475460 QTRT2Q9H974 415 aaKnown RBP11.34□□□□□ -0.59
COMMD3-BMI1-203ENST00000475460 MYO5BQ9ULV0 1848 aa11.34□□□□□ -0.59
COMMD3-BMI1-203ENST00000475460 SETD5Q9C0A6 1442 aa11.34□□□□□ -0.59
COMMD3-BMI1-203ENST00000475460 DDX27Q96GQ7 796 aaKnown RBP11.33□□□□□ -0.6
COMMD3-BMI1-203ENST00000475460 GPHNQ9NQX3 736 aaPredicted RBP11.33□□□□□ -0.6
COMMD3-BMI1-203ENST00000475460 IQGAP3Q86VI3 1631 aa11.33□□□□□ -0.6
COMMD3-BMI1-203ENST00000475460 MST1RQ04912 1400 aa11.33□□□□□ -0.6
COMMD3-BMI1-203ENST00000475460 ASXL1Q8IXJ9 1541 aa11.32□□□□□ -0.6
COMMD3-BMI1-203ENST00000475460 E2F4Q16254 413 aa11.32□□□□□ -0.6
COMMD3-BMI1-203ENST00000475460 TMEM92Q6UXU6 159 aa11.32□□□□□ -0.6
COMMD3-BMI1-203ENST00000475460 NGLY1Q96IV0 654 aa11.32□□□□□ -0.6
COMMD3-BMI1-203ENST00000475460 SETD1AO15047 1707 aaKnown RBP11.32□□□□□ -0.6
COMMD3-BMI1-203ENST00000475460 ADAMTS2O95450 1211 aa11.31□□□□□ -0.6
COMMD3-BMI1-203ENST00000475460 RBM6P78332 1123 aaKnown RBP11.31□□□□□ -0.6
COMMD3-BMI1-203ENST00000475460 NBR1Q14596 966 aa11.31□□□□□ -0.6
COMMD3-BMI1-203ENST00000475460 PNPLA6Q8IY17 1366 aa11.3□□□□□ -0.6
COMMD3-BMI1-203ENST00000475460 SETBP1Q9Y6X0 1596 aa11.3□□□□□ -0.6
COMMD3-BMI1-203ENST00000475460 ADGRL3Q9HAR2 1447 aa11.3□□□□□ -0.6
COMMD3-BMI1-203ENST00000475460 KIF3CO14782 793 aa11.29□□□□□ -0.6
COMMD3-BMI1-203ENST00000475460 DSG2Q14126 1118 aa11.29□□□□□ -0.6
COMMD3-BMI1-203ENST00000475460 C3orf67Q6ZVT6 689 aa11.29□□□□□ -0.6
COMMD3-BMI1-203ENST00000475460 CDK12Q9NYV4 1490 aaPredicted RBP11.29□□□□□ -0.6
COMMD3-BMI1-203ENST00000475460 SHPRHQ149N8 1683 aa11.29□□□□□ -0.6
COMMD3-BMI1-203ENST00000475460 C2orf72A6NCS6 295 aa11.28□□□□□ -0.6
COMMD3-BMI1-203ENST00000475460 PPP1R15BQ5SWA1 713 aa11.28□□□□□ -0.6
COMMD3-BMI1-203ENST00000475460 ORAI2Q96SN7 254 aa11.28□□□□□ -0.6
COMMD3-BMI1-203ENST00000475460 C1orf167Q5SNV9 1468 aa11.27□□□□□ -0.6
COMMD3-BMI1-203ENST00000475460 CAMK2BQ13554 666 aa11.27□□□□□ -0.61
COMMD3-BMI1-203ENST00000475460 XRN1Q8IZH2 1706 aaKnown RBP11.26□□□□□ -0.61
COMMD3-BMI1-203ENST00000475460 USP21Q9UK80 565 aa11.26□□□□□ -0.61
COMMD3-BMI1-203ENST00000475460 NRXN3Q9Y4C0 1643 aa11.26□□□□□ -0.61
COMMD3-BMI1-203ENST00000475460 SOS2Q07890 1332 aaPredicted RBP11.26□□□□□ -0.61
COMMD3-BMI1-203ENST00000475460 RPGRIP1LQ68CZ1 1315 aa11.26□□□□□ -0.61
COMMD3-BMI1-203ENST00000475460 PRKCSHP14314 528 aaPredicted RBP11.25□□□□□ -0.61
COMMD3-BMI1-203ENST00000475460 TRPC5Q9UL62 973 aaPredicted RBP11.25□□□□□ -0.61
COMMD3-BMI1-203ENST00000475460 ROBO2Q9HCK4 1378 aa11.25□□□□□ -0.61
COMMD3-BMI1-203ENST00000475460 FOXK1P85037 733 aa11.24□□□□□ -0.61
COMMD3-BMI1-203ENST00000475460 TMC2Q8TDI7 906 aa11.24□□□□□ -0.61
COMMD3-BMI1-203ENST00000475460 ARHGEF1Q92888 912 aaKnown RBP11.24□□□□□ -0.61
COMMD3-BMI1-203ENST00000475460 RGS12O14924 1447 aa11.24□□□□□ -0.61
COMMD3-BMI1-203ENST00000475460 PTCH1Q13635 1447 aa11.24□□□□□ -0.61
COMMD3-BMI1-203ENST00000475460 NEXMIFQ5QGS0 1516 aa11.24□□□□□ -0.61
COMMD3-BMI1-203ENST00000475460 ESCO1Q5FWF5 840 aa11.23□□□□□ -0.61
COMMD3-BMI1-203ENST00000475460 NAIPQ13075 1403 aa11.22□□□□□ -0.61
COMMD3-BMI1-203ENST00000475460 SPHKAPQ2M3C7 1700 aa11.22□□□□□ -0.61
COMMD3-BMI1-203ENST00000475460 ATAD2Q6PL18 1390 aa11.22□□□□□ -0.61
COMMD3-BMI1-203ENST00000475460 FNBP4Q8N3X1 1017 aaPredicted RBP11.22□□□□□ -0.61
COMMD3-BMI1-203ENST00000475460 EMILIN3Q9NT22 766 aa11.22□□□□□ -0.61
COMMD3-BMI1-203ENST00000475460 CLTCL1P53675 1640 aa11.21□□□□□ -0.61
COMMD3-BMI1-203ENST00000475460 NHSL1Q5SYE7 1610 aa11.21□□□□□ -0.61
COMMD3-BMI1-203ENST00000475460 HFM1A2PYH4 1435 aa11.21□□□□□ -0.61
COMMD3-BMI1-203ENST00000475460 NPHP3Q7Z494 1330 aa11.21□□□□□ -0.61
COMMD3-BMI1-203ENST00000475460 FOXO3O43524 673 aa11.21□□□□□ -0.61
COMMD3-BMI1-203ENST00000475460 POTEJP0CG39 1038 aa11.21□□□□□ -0.61
COMMD3-BMI1-203ENST00000475460 POTEB2H3BUK9 544 aa11.2□□□□□ -0.62
COMMD3-BMI1-203ENST00000475460 XPCQ01831 940 aaPredicted RBP11.2□□□□□ -0.62
COMMD3-BMI1-203ENST00000475460 MAMSTRQ6ZN01 415 aa11.2□□□□□ -0.62
COMMD3-BMI1-203ENST00000475460 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.2□□□□□ -0.62
COMMD3-BMI1-203ENST00000475460 STK26Q9P289 416 aa11.2□□□□□ -0.62
COMMD3-BMI1-203ENST00000475460 ARIH1Q9Y4X5 557 aaPredicted RBP11.2□□□□□ -0.62
COMMD3-BMI1-203ENST00000475460 NUTM2FA1L443 756 aa11.19□□□□□ -0.62
COMMD3-BMI1-203ENST00000475460 RGL3Q3MIN7 710 aa11.19□□□□□ -0.62
COMMD3-BMI1-203ENST00000475460 PLPP6Q8IY26 295 aa11.19□□□□□ -0.62
COMMD3-BMI1-203ENST00000475460 SCUBE2Q9NQ36 999 aa11.19□□□□□ -0.62
COMMD3-BMI1-203ENST00000475460 RRBP1Q9P2E9 1410 aaKnown RBP11.18□□□□□ -0.62
COMMD3-BMI1-203ENST00000475460 LRPPRCP42704 1394 aaKnown RBP11.18□□□□□ -0.62
COMMD3-BMI1-203ENST00000475460 NALCNQ8IZF0 1738 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms