RNA–Protein interactions for RNA: ENST00000475213.1

SSR1-205, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3

Gene SSR1, Length 446 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-205ENST00000475213 GPRASP1Q5JY77 1395 aa17.63■□□□□ 0.41
SSR1-205ENST00000475213 RGS12O14924 1447 aa17.63■□□□□ 0.41
SSR1-205ENST00000475213 ATRNO75882 1429 aa17.63■□□□□ 0.41
SSR1-205ENST00000475213 NGDNQ8NEJ9 315 aaKnown RBP17.62■□□□□ 0.41
SSR1-205ENST00000475213 TOPAZ1Q8N9V7 1692 aa17.61■□□□□ 0.41
SSR1-205ENST00000475213 PLEKHG5O94827 1062 aa17.61■□□□□ 0.41
SSR1-205ENST00000475213 HAP1P54257 671 aaPredicted RBP17.61■□□□□ 0.41
SSR1-205ENST00000475213 CENPJQ9HC77 1338 aaPredicted RBP17.61■□□□□ 0.41
SSR1-205ENST00000475213 QRICH2Q9H0J4 1663 aa17.61■□□□□ 0.41
SSR1-205ENST00000475213 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.61■□□□□ 0.41
SSR1-205ENST00000475213 SLIT2O94813 1529 aa17.6■□□□□ 0.41
SSR1-205ENST00000475213 UPF1Q92900 1129 aaKnown RBP eCLIP17.58■□□□□ 0.42e-12■■■■■ 32.9
SSR1-205ENST00000475213 UNC5CLQ8IV45 518 aa17.57■□□□□ 0.4
SSR1-205ENST00000475213 CCDC61Q9Y6R9 512 aa17.57■□□□□ 0.4
SSR1-205ENST00000475213 PLCH1Q4KWH8 1693 aa17.57■□□□□ 0.4
SSR1-205ENST00000475213 ROCK2O75116 1388 aaKnown RBP17.56■□□□□ 0.4
SSR1-205ENST00000475213 CAPN15O75808 1086 aa17.56■□□□□ 0.4
SSR1-205ENST00000475213 PAK3O75914 559 aaPredicted RBP17.56■□□□□ 0.4
SSR1-205ENST00000475213 NWD2Q9ULI1 1742 aa17.55■□□□□ 0.4
SSR1-205ENST00000475213 CRYBG1Q9Y4K1 1723 aa17.55■□□□□ 0.4
SSR1-205ENST00000475213 POLR3AO14802 1390 aaPredicted RBP17.55■□□□□ 0.4
SSR1-205ENST00000475213 ACEP12821 1306 aa17.55■□□□□ 0.4
SSR1-205ENST00000475213 PLEKHG3A1L390 1219 aa17.55■□□□□ 0.4
SSR1-205ENST00000475213 NBPF8Q3BBV2 869 aa17.55■□□□□ 0.4
SSR1-205ENST00000475213 GJD4Q96KN9 370 aaPredicted RBP17.55■□□□□ 0.4
SSR1-205ENST00000475213 SRPK2P78362 688 aaKnown RBP17.54■□□□□ 0.4
SSR1-205ENST00000475213 CABP2Q9NPB3 220 aa17.54■□□□□ 0.4
SSR1-205ENST00000475213 FAM83GA6ND36 823 aa17.53■□□□□ 0.4
SSR1-205ENST00000475213 GLI3P10071 1580 aa17.53■□□□□ 0.4
SSR1-205ENST00000475213 PPIP5K1Q6PFW1 1433 aa17.52■□□□□ 0.4
SSR1-205ENST00000475213 RALGAPBQ86X10 1494 aa17.51■□□□□ 0.39
SSR1-205ENST00000475213 TONSLQ96HA7 1378 aa17.51■□□□□ 0.39
SSR1-205ENST00000475213 COL14A1Q05707 1796 aaKnown RBP17.5■□□□□ 0.39
SSR1-205ENST00000475213 NRAPQ86VF7 1730 aa17.5■□□□□ 0.39
SSR1-205ENST00000475213 VPS72Q15906 364 aa17.49■□□□□ 0.39
SSR1-205ENST00000475213 PHRF1Q9P1Y6 1649 aaKnown RBP17.49■□□□□ 0.39
SSR1-205ENST00000475213 EP400Q96L91 3159 aa17.49■□□□□ 0.39
SSR1-205ENST00000475213 EVC2Q86UK5 1308 aa17.48■□□□□ 0.39
SSR1-205ENST00000475213 NUTM2GQ5VZR2 741 aa17.48■□□□□ 0.39
SSR1-205ENST00000475213 ATAD2Q6PL18 1390 aa17.48■□□□□ 0.39
SSR1-205ENST00000475213 BTG4Q9NY30 223 aa17.47■□□□□ 0.39
SSR1-205ENST00000475213 CABP1Q9NZU7 370 aa17.47■□□□□ 0.39
SSR1-205ENST00000475213 BRWD3Q6RI45 1802 aa17.47■□□□□ 0.39
SSR1-205ENST00000475213 CCDC9Q9Y3X0 531 aaKnown RBP17.46■□□□□ 0.39
SSR1-205ENST00000475213 ABTB2Q8N961 1025 aa17.45■□□□□ 0.38
SSR1-205ENST00000475213 CARD11Q9BXL7 1154 aa17.45■□□□□ 0.38
SSR1-205ENST00000475213 DSG3P32926 999 aa17.44■□□□□ 0.38
SSR1-205ENST00000475213 PRDM11Q9NQV5 511 aa17.44■□□□□ 0.38
SSR1-205ENST00000475213 KIAA0232Q92628 1395 aa17.43■□□□□ 0.38
SSR1-205ENST00000475213 USP6P35125 1406 aa17.43■□□□□ 0.38
SSR1-205ENST00000475213 BRD4O60885 1362 aaPredicted RBP17.42■□□□□ 0.38
SSR1-205ENST00000475213 NRKQ7Z2Y5 1582 aa17.42■□□□□ 0.38
SSR1-205ENST00000475213 ONECUT3O60422 494 aaPredicted RBP17.42■□□□□ 0.38
SSR1-205ENST00000475213 SBNO2Q9Y2G9 1366 aa17.41■□□□□ 0.38
SSR1-205ENST00000475213 AKAP12Q02952 1782 aa17.41■□□□□ 0.38
SSR1-205ENST00000475213 ZC3H6P61129 1189 aaKnown RBP17.41■□□□□ 0.38
SSR1-205ENST00000475213 CHRNA2Q15822 529 aa17.41■□□□□ 0.38
SSR1-205ENST00000475213 SEPT12Q8IYM1 358 aa17.41■□□□□ 0.38
SSR1-205ENST00000475213 USP19O94966 1318 aa17.41■□□□□ 0.38
SSR1-205ENST00000475213 MYCNP04198 464 aaPredicted RBP17.4■□□□□ 0.38
SSR1-205ENST00000475213 SAMD1Q6SPF0 538 aaPredicted RBP17.4■□□□□ 0.38
SSR1-205ENST00000475213 NLRP13Q86W25 1043 aa17.4■□□□□ 0.38
SSR1-205ENST00000475213 SSH2Q76I76 1423 aa17.39■□□□□ 0.38
SSR1-205ENST00000475213 FOXD4L1Q9NU39 408 aa17.38■□□□□ 0.37
SSR1-205ENST00000475213 SPATA31A5Q5VU36 1347 aa17.38■□□□□ 0.37
SSR1-205ENST00000475213 SPATA31A7Q8IWB4 1347 aa17.38■□□□□ 0.37
SSR1-205ENST00000475213 PIK3C2AO00443 1686 aa17.38■□□□□ 0.37
SSR1-205ENST00000475213 GCP02774 474 aa17.37■□□□□ 0.37
SSR1-205ENST00000475213 FAM98CQ17RN3 349 aaKnown RBP17.37■□□□□ 0.37
SSR1-205ENST00000475213 ZNF692Q9BU19 519 aaPredicted RBP17.37■□□□□ 0.37
SSR1-205ENST00000475213 CPDO75976 1380 aa17.37■□□□□ 0.37
SSR1-205ENST00000475213 NLRP6P59044 892 aa17.36■□□□□ 0.37
SSR1-205ENST00000475213 LMO7Q8WWI1 1683 aa17.36■□□□□ 0.37
SSR1-205ENST00000475213 A0A0G2JS52 829 aa17.35■□□□□ 0.37
SSR1-205ENST00000475213 MYT1Q01538 1121 aa17.35■□□□□ 0.37
SSR1-205ENST00000475213 CCDC125Q86Z20 511 aa17.35■□□□□ 0.37
SSR1-205ENST00000475213 STRN4Q9NRL3 753 aa17.35■□□□□ 0.37
SSR1-205ENST00000475213 CPSF1Q10570 1443 aaKnown RBP17.35■□□□□ 0.37
SSR1-205ENST00000475213 SLIT3O75094 1523 aa17.34■□□□□ 0.37
SSR1-205ENST00000475213 MON2Q7Z3U7 1717 aa17.34■□□□□ 0.37
SSR1-205ENST00000475213 KRT27Q7Z3Y8 459 aa17.34■□□□□ 0.37
SSR1-205ENST00000475213 TTC21BQ7Z4L5 1316 aa17.34■□□□□ 0.37
SSR1-205ENST00000475213 CAMTA1Q9Y6Y1 1673 aa17.34■□□□□ 0.37
SSR1-205ENST00000475213 THSD7AQ9UPZ6 1657 aa17.33■□□□□ 0.37
SSR1-205ENST00000475213 SPATA31A1Q5TZJ5 1347 aa17.33■□□□□ 0.36
SSR1-205ENST00000475213 KTN1Q86UP2 1357 aaKnown RBP17.32■□□□□ 0.36
SSR1-205ENST00000475213 EVA1CP58658 441 aa17.32■□□□□ 0.36
SSR1-205ENST00000475213 TTC21AQ8NDW8 1320 aa17.31■□□□□ 0.36
SSR1-205ENST00000475213 ST20-MTHFSA0A0A6YYL1 179 aa17.31■□□□□ 0.36
SSR1-205ENST00000475213 PCGF6Q9BYE7 350 aa17.31■□□□□ 0.36
SSR1-205ENST00000475213 CD163L1Q9NR16 1453 aa17.31■□□□□ 0.36
SSR1-205ENST00000475213 BLMP54132 1417 aaPredicted RBP17.3■□□□□ 0.36
SSR1-205ENST00000475213 TMC1Q8TDI8 760 aa17.3■□□□□ 0.36
SSR1-205ENST00000475213 TESK2Q96S53 571 aa17.3■□□□□ 0.36
SSR1-205ENST00000475213 ZBTB22O15209 634 aa17.29■□□□□ 0.36
SSR1-205ENST00000475213 LARP1Q6PKG0 1096 aaKnown RBP17.29■□□□□ 0.36
SSR1-205ENST00000475213 USP35Q9P2H5 1018 aa17.29■□□□□ 0.36
SSR1-205ENST00000475213 COL18A1P39060 1754 aa17.29■□□□□ 0.36
SSR1-205ENST00000475213 ZBTB7CA1YPR0 619 aa17.28■□□□□ 0.36
SSR1-205ENST00000475213 PUS7Q96PZ0 661 aaKnown RBP17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms