RNA–Protein interactions for RNA: ENST00000475208.5

TMEM54-205, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best)

Gene TMEM54, Length 768 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-205ENST00000475208 BTG4Q9NY30 223 aa36.42■■■■□ 3.42
TMEM54-205ENST00000475208 SF3B2Q13435 895 aaKnown RBP36.41■■■■□ 3.42
TMEM54-205ENST00000475208 DEFB132Q7Z7B7 95 aa36.41■■■■□ 3.42
TMEM54-205ENST00000475208 ATP7BP35670 1465 aa36.39■■■■□ 3.42
TMEM54-205ENST00000475208 A0A0G2JS52 829 aa36.39■■■■□ 3.42
TMEM54-205ENST00000475208 MYT1Q01538 1121 aa36.39■■■■□ 3.42
TMEM54-205ENST00000475208 ITSN1Q15811 1721 aa36.39■■■■□ 3.42
TMEM54-205ENST00000475208 CRYBG1Q9Y4K1 1723 aa36.39■■■■□ 3.42
TMEM54-205ENST00000475208 PAK3O75914 559 aaPredicted RBP36.38■■■■□ 3.41
TMEM54-205ENST00000475208 FAM98CQ17RN3 349 aaKnown RBP36.36■■■■□ 3.41
TMEM54-205ENST00000475208 NUDT16Q96DE0 195 aaKnown RBP36.34■■■■□ 3.41
TMEM54-205ENST00000475208 PRDM11Q9NQV5 511 aa36.3■■■■□ 3.4
TMEM54-205ENST00000475208 SPATA31A5Q5VU36 1347 aa36.28■■■■□ 3.4
TMEM54-205ENST00000475208 SPATA31A7Q8IWB4 1347 aa36.28■■■■□ 3.4
TMEM54-205ENST00000475208 CDK19Q9BWU1 502 aa36.27■■■■□ 3.4
TMEM54-205ENST00000475208 KIAA1210Q9ULL0 1709 aa36.26■■■■□ 3.4
TMEM54-205ENST00000475208 PHRF1Q9P1Y6 1649 aaKnown RBP36.25■■■■□ 3.39
TMEM54-205ENST00000475208 TOPAZ1Q8N9V7 1692 aa36.25■■■■□ 3.39
TMEM54-205ENST00000475208 KIAA0232Q92628 1395 aa36.24■■■■□ 3.39
TMEM54-205ENST00000475208 THSD7AQ9UPZ6 1657 aa36.22■■■■□ 3.39
TMEM54-205ENST00000475208 POLR3AO14802 1390 aaPredicted RBP36.21■■■■□ 3.39
TMEM54-205ENST00000475208 BAG6P46379 1132 aa36.21■■■■□ 3.39
TMEM54-205ENST00000475208 ACEP12821 1306 aa36.19■■■■□ 3.38
TMEM54-205ENST00000475208 NUTM2GQ5VZR2 741 aa36.19■■■■□ 3.38
TMEM54-205ENST00000475208 CCDC61Q9Y6R9 512 aa36.19■■■■□ 3.38
TMEM54-205ENST00000475208 CHRNA2Q15822 529 aa36.18■■■■□ 3.38
TMEM54-205ENST00000475208 FAM182BQ5T319 152 aa36.17■■■■□ 3.38
TMEM54-205ENST00000475208 NBPF1Q3BBV0 1214 aa36.16■■■■□ 3.38
TMEM54-205ENST00000475208 NBPF8Q3BBV2 869 aa36.16■■■■□ 3.38
TMEM54-205ENST00000475208 RGPD1P0DJD0 1748 aa36.16■■■■□ 3.38
TMEM54-205ENST00000475208 ZC3H6P61129 1189 aaKnown RBP36.15■■■■□ 3.38
TMEM54-205ENST00000475208 SPATA31A1Q5TZJ5 1347 aa36.14■■■■□ 3.38
TMEM54-205ENST00000475208 PLEKHG3A1L390 1219 aa36.14■■■■□ 3.38
TMEM54-205ENST00000475208 STRN4Q9NRL3 753 aa36.13■■■■□ 3.37
TMEM54-205ENST00000475208 NRKQ7Z2Y5 1582 aa36.1■■■■□ 3.37
TMEM54-205ENST00000475208 EN1Q05925 392 aaPredicted RBP36.08■■■■□ 3.37
TMEM54-205ENST00000475208 LRP5O75197 1615 aa36.08■■■■□ 3.37
TMEM54-205ENST00000475208 PSDA5PKW4 1024 aaPredicted RBP36.07■■■■□ 3.36
TMEM54-205ENST00000475208 ABTB2Q8N961 1025 aa36.07■■■■□ 3.36
TMEM54-205ENST00000475208 TNS1Q9HBL0 1735 aaKnown RBP36.06■■■■□ 3.36
TMEM54-205ENST00000475208 SRPK2P78362 688 aaKnown RBP36.06■■■■□ 3.36
TMEM54-205ENST00000475208 CENPJQ9HC77 1338 aaPredicted RBP36.06■■■■□ 3.36
TMEM54-205ENST00000475208 DISP2A7MBM2 1401 aa36.05■■■■□ 3.36
TMEM54-205ENST00000475208 PPIP5K1Q6PFW1 1433 aa36.05■■■■□ 3.36
TMEM54-205ENST00000475208 SSH2Q76I76 1423 aa36.05■■■■□ 3.36
TMEM54-205ENST00000475208 USP35Q9P2H5 1018 aa36.03■■■■□ 3.36
TMEM54-205ENST00000475208 USP19O94966 1318 aa36.03■■■■□ 3.36
TMEM54-205ENST00000475208 EVA1CP58658 441 aa36.02■■■■□ 3.36
TMEM54-205ENST00000475208 CPDO75976 1380 aa36.02■■■■□ 3.36
TMEM54-205ENST00000475208 CAMTA1Q9Y6Y1 1673 aa36.01■■■■□ 3.36
TMEM54-205ENST00000475208 CABP2Q9NPB3 220 aa36.01■■■■□ 3.36
TMEM54-205ENST00000475208 QRICH2Q9H0J4 1663 aa36■■■■□ 3.35
TMEM54-205ENST00000475208 LMO7Q8WWI1 1683 aa36■■■■□ 3.35
TMEM54-205ENST00000475208 FAM196AQ6ZSG2 479 aa35.98■■■■□ 3.35
TMEM54-205ENST00000475208 BARGINQ6ZT62 677 aa35.97■■■■□ 3.35
TMEM54-205ENST00000475208 NLRP13Q86W25 1043 aa35.97■■■■□ 3.35
TMEM54-205ENST00000475208 TRIM37O94972 964 aa35.96■■■■□ 3.35
TMEM54-205ENST00000475208 LARP1Q6PKG0 1096 aaKnown RBP35.96■■■■□ 3.35
TMEM54-205ENST00000475208 GCP02774 474 aa35.93■■■■□ 3.34
TMEM54-205ENST00000475208 EZH2Q15910 746 aaKnown RBP35.93■■■■□ 3.34
TMEM54-205ENST00000475208 BRD4O60885 1362 aaPredicted RBP35.92■■■■□ 3.34
TMEM54-205ENST00000475208 TCP11L2Q8N4U5 519 aa35.92■■■■□ 3.34
TMEM54-205ENST00000475208 PDE3BQ13370 1112 aa35.91■■■■□ 3.34
TMEM54-205ENST00000475208 R3HDM1Q15032 1099 aaKnown RBP35.91■■■■□ 3.34
TMEM54-205ENST00000475208 USP6P35125 1406 aa35.9■■■■□ 3.34
TMEM54-205ENST00000475208 L3MBTL2Q969R5 705 aa35.89■■■■□ 3.34
TMEM54-205ENST00000475208 CABP1Q9NZU7 370 aa35.89■■■■□ 3.34
TMEM54-205ENST00000475208 COL5A2P05997 1499 aaPredicted RBP35.88■■■■□ 3.33
TMEM54-205ENST00000475208 CAMKK2Q96RR4 588 aa35.88■■■■□ 3.33
TMEM54-205ENST00000475208 APBA3O96018 575 aa35.86■■■■□ 3.33
TMEM54-205ENST00000475208 THRAP3Q9Y2W1 955 aaKnown RBP35.85■■■■□ 3.33
TMEM54-205ENST00000475208 TRPM1Q7Z4N2 1603 aa35.84■■■■□ 3.33
TMEM54-205ENST00000475208 PARD3Q8TEW0 1356 aa35.84■■■■□ 3.33
TMEM54-205ENST00000475208 SLIT3O75094 1523 aa35.83■■■■□ 3.33
TMEM54-205ENST00000475208 ZBTB7CA1YPR0 619 aa35.83■■■■□ 3.33
TMEM54-205ENST00000475208 NLRP6P59044 892 aa35.83■■■■□ 3.33
TMEM54-205ENST00000475208 EVC2Q86UK5 1308 aa35.82■■■■□ 3.32
TMEM54-205ENST00000475208 PARP4Q9UKK3 1724 aaKnown RBP35.81■■■■□ 3.32
TMEM54-205ENST00000475208 CRB1P82279 1406 aa35.8■■■■□ 3.32
TMEM54-205ENST00000475208 PIK3C2AO00443 1686 aa35.79■■■■□ 3.32
TMEM54-205ENST00000475208 SIN3AQ96ST3 1273 aa35.79■■■■□ 3.32
TMEM54-205ENST00000475208 RREB1Q92766 1687 aa35.78■■■■□ 3.32
TMEM54-205ENST00000475208 AATKQ6ZMQ8 1374 aa35.78■■■■□ 3.32
TMEM54-205ENST00000475208 ROCK2O75116 1388 aaKnown RBP35.76■■■■□ 3.31
TMEM54-205ENST00000475208 NUP188Q5SRE5 1749 aa35.74■■■■□ 3.31
TMEM54-205ENST00000475208 NEUROD1Q13562 356 aa35.71■■■■□ 3.31
TMEM54-205ENST00000475208 COL18A1P39060 1754 aa35.71■■■■□ 3.31
TMEM54-205ENST00000475208 LRRC37A3O60309 1634 aa35.7■■■■□ 3.31
TMEM54-205ENST00000475208 OVOS2A0A0G2JMS6 1433 aa35.69■■■■□ 3.3
TMEM54-205ENST00000475208 OVOS2A0A0J9YW53 1432 aa35.69■■■■□ 3.3
TMEM54-205ENST00000475208 OVOS2Q6IE36 1432 aa35.69■■■■□ 3.3
TMEM54-205ENST00000475208 CPSF1Q10570 1443 aaKnown RBP35.68■■■■□ 3.3
TMEM54-205ENST00000475208 TTC21BQ7Z4L5 1316 aa35.68■■■■□ 3.3
TMEM54-205ENST00000475208 TOM1L2Q6ZVM7 507 aa35.68■■■■□ 3.3
TMEM54-205ENST00000475208 AKAP12Q02952 1782 aa35.68■■■■□ 3.3
TMEM54-205ENST00000475208 PEAK1Q9H792 1746 aa35.67■■■■□ 3.3
TMEM54-205ENST00000475208 C11orf95C9JLR9 678 aaPredicted RBP35.67■■■■□ 3.3
TMEM54-205ENST00000475208 ZNF692Q9BU19 519 aaPredicted RBP35.67■■■■□ 3.3
TMEM54-205ENST00000475208 NBPF14Q5TI25 921 aa35.65■■■■□ 3.3
TMEM54-205ENST00000475208 AXIN2Q9Y2T1 843 aa35.65■■■■□ 3.3
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms