RNA–Protein interactions for RNA: ENST00000474807.5

DNMT3A-210, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 5

Gene DNMT3A, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-210ENST00000474807 TRPM1Q7Z4N2 1603 aa26.47■■□□□ 1.83
DNMT3A-210ENST00000474807 EP400Q96L91 3159 aa26.47■■□□□ 1.83
DNMT3A-210ENST00000474807 PAK3O75914 559 aaPredicted RBP26.47■■□□□ 1.83
DNMT3A-210ENST00000474807 CRYBG1Q9Y4K1 1723 aa26.47■■□□□ 1.83
DNMT3A-210ENST00000474807 PLEKHG3A1L390 1219 aa26.46■■□□□ 1.83
DNMT3A-210ENST00000474807 VPS72Q15906 364 aa26.45■■□□□ 1.82
DNMT3A-210ENST00000474807 ACEP12821 1306 aa26.44■■□□□ 1.82
DNMT3A-210ENST00000474807 NBPF8Q3BBV2 869 aa26.44■■□□□ 1.82
DNMT3A-210ENST00000474807 QRICH2Q9H0J4 1663 aa26.44■■□□□ 1.82
DNMT3A-210ENST00000474807 SRPK2P78362 688 aaKnown RBP26.41■■□□□ 1.82
DNMT3A-210ENST00000474807 COL14A1Q05707 1796 aaKnown RBP26.41■■□□□ 1.82
DNMT3A-210ENST00000474807 NRAPQ86VF7 1730 aa26.4■■□□□ 1.82
DNMT3A-210ENST00000474807 CABP2Q9NPB3 220 aa26.4■■□□□ 1.82
DNMT3A-210ENST00000474807 BTG4Q9NY30 223 aa26.39■■□□□ 1.82
DNMT3A-210ENST00000474807 PPIP5K1Q6PFW1 1433 aa26.39■■□□□ 1.81
DNMT3A-210ENST00000474807 ROCK2O75116 1388 aaKnown RBP26.38■■□□□ 1.81
DNMT3A-210ENST00000474807 ONECUT3O60422 494 aaPredicted RBP26.38■■□□□ 1.81
DNMT3A-210ENST00000474807 CCDC9Q9Y3X0 531 aaKnown RBP26.36■■□□□ 1.81
DNMT3A-210ENST00000474807 PHRF1Q9P1Y6 1649 aaKnown RBP26.36■■□□□ 1.81
DNMT3A-210ENST00000474807 BRWD3Q6RI45 1802 aa26.35■■□□□ 1.81
DNMT3A-210ENST00000474807 SEPT12Q8IYM1 358 aa26.34■■□□□ 1.81
DNMT3A-210ENST00000474807 NUTM2GQ5VZR2 741 aa26.33■■□□□ 1.81
DNMT3A-210ENST00000474807 TRIM26Q12899 539 aaPredicted RBP26.32■■□□□ 1.8
DNMT3A-210ENST00000474807 PRDM11Q9NQV5 511 aa26.32■■□□□ 1.8
DNMT3A-210ENST00000474807 KIAA0232Q92628 1395 aa26.32■■□□□ 1.8
DNMT3A-210ENST00000474807 CCDC125Q86Z20 511 aa26.31■■□□□ 1.8
DNMT3A-210ENST00000474807 ABTB2Q8N961 1025 aa26.31■■□□□ 1.8
DNMT3A-210ENST00000474807 CABP1Q9NZU7 370 aa26.31■■□□□ 1.8
DNMT3A-210ENST00000474807 EVC2Q86UK5 1308 aa26.31■■□□□ 1.8
DNMT3A-210ENST00000474807 BRD4O60885 1362 aaPredicted RBP26.29■■□□□ 1.8
DNMT3A-210ENST00000474807 ZC3H6P61129 1189 aaKnown RBP26.27■■□□□ 1.8
DNMT3A-210ENST00000474807 USP19O94966 1318 aa26.27■■□□□ 1.8
DNMT3A-210ENST00000474807 SPATA31A5Q5VU36 1347 aa26.27■■□□□ 1.8
DNMT3A-210ENST00000474807 SPATA31A7Q8IWB4 1347 aa26.27■■□□□ 1.8
DNMT3A-210ENST00000474807 NRKQ7Z2Y5 1582 aa26.27■■□□□ 1.8
DNMT3A-210ENST00000474807 USP6P35125 1406 aa26.26■■□□□ 1.79
DNMT3A-210ENST00000474807 CHRNA2Q15822 529 aa26.26■■□□□ 1.79
DNMT3A-210ENST00000474807 FAM98CQ17RN3 349 aaKnown RBP26.26■■□□□ 1.79
DNMT3A-210ENST00000474807 TONSLQ96HA7 1378 aa26.25■■□□□ 1.79
DNMT3A-210ENST00000474807 KRT27Q7Z3Y8 459 aa26.25■■□□□ 1.79
DNMT3A-210ENST00000474807 NLRP13Q86W25 1043 aa26.24■■□□□ 1.79
DNMT3A-210ENST00000474807 SSH2Q76I76 1423 aa26.23■■□□□ 1.79
DNMT3A-210ENST00000474807 BLMP54132 1417 aaPredicted RBP26.22■■□□□ 1.79
DNMT3A-210ENST00000474807 CPDO75976 1380 aa26.22■■□□□ 1.79
DNMT3A-210ENST00000474807 CARD11Q9BXL7 1154 aa26.22■■□□□ 1.79
DNMT3A-210ENST00000474807 SBNO2Q9Y2G9 1366 aa26.2■■□□□ 1.79
DNMT3A-210ENST00000474807 A0A0G2JS52 829 aa26.2■■□□□ 1.78
DNMT3A-210ENST00000474807 GCP02774 474 aa26.2■■□□□ 1.78
DNMT3A-210ENST00000474807 MYT1Q01538 1121 aa26.2■■□□□ 1.78
DNMT3A-210ENST00000474807 SPATA31A1Q5TZJ5 1347 aa26.19■■□□□ 1.78
DNMT3A-210ENST00000474807 LMO7Q8WWI1 1683 aa26.19■■□□□ 1.78
DNMT3A-210ENST00000474807 THSD7AQ9UPZ6 1657 aa26.19■■□□□ 1.78
DNMT3A-210ENST00000474807 STRN4Q9NRL3 753 aa26.18■■□□□ 1.78
DNMT3A-210ENST00000474807 CAMTA1Q9Y6Y1 1673 aa26.18■■□□□ 1.78
DNMT3A-210ENST00000474807 ZNF692Q9BU19 519 aaPredicted RBP26.17■■□□□ 1.78
DNMT3A-210ENST00000474807 AKAP12Q02952 1782 aa26.16■■□□□ 1.78
DNMT3A-210ENST00000474807 SLIT3O75094 1523 aa26.16■■□□□ 1.78
DNMT3A-210ENST00000474807 NLRP6P59044 892 aa26.16■■□□□ 1.78
DNMT3A-210ENST00000474807 PIK3C2AO00443 1686 aa26.15■■□□□ 1.78
DNMT3A-210ENST00000474807 CPSF1Q10570 1443 aaKnown RBP26.14■■□□□ 1.78
DNMT3A-210ENST00000474807 EVA1CP58658 441 aa26.13■■□□□ 1.77
DNMT3A-210ENST00000474807 TTC21BQ7Z4L5 1316 aa26.13■■□□□ 1.77
DNMT3A-210ENST00000474807 LARP1Q6PKG0 1096 aaKnown RBP26.11■■□□□ 1.77
DNMT3A-210ENST00000474807 DEFB132Q7Z7B7 95 aa26.11■■□□□ 1.77
DNMT3A-210ENST00000474807 SRCAPQ6ZRS2 3230 aa26.11■■□□□ 1.77
DNMT3A-210ENST00000474807 SF3B2Q13435 895 aaKnown RBP26.1■■□□□ 1.77
DNMT3A-210ENST00000474807 BARGINQ6ZT62 677 aa26.09■■□□□ 1.77
DNMT3A-210ENST00000474807 USP35Q9P2H5 1018 aa26.09■■□□□ 1.77
DNMT3A-210ENST00000474807 ZRANB1Q9UGI0 708 aa26.09■■□□□ 1.77
DNMT3A-210ENST00000474807 COL5A2P05997 1499 aaPredicted RBP26.09■■□□□ 1.77
DNMT3A-210ENST00000474807 TTC21AQ8NDW8 1320 aa26.09■■□□□ 1.77
DNMT3A-210ENST00000474807 FAM182BQ5T319 152 aa26.08■■□□□ 1.77
DNMT3A-210ENST00000474807 AATKQ6ZMQ8 1374 aa26.07■■□□□ 1.76
DNMT3A-210ENST00000474807 KTN1Q86UP2 1357 aaKnown RBP26.07■■□□□ 1.76
DNMT3A-210ENST00000474807 CD163L1Q9NR16 1453 aa26.06■■□□□ 1.76
DNMT3A-210ENST00000474807 MON2Q7Z3U7 1717 aa26.06■■□□□ 1.76
DNMT3A-210ENST00000474807 TCP11L2Q8N4U5 519 aa26.05■■□□□ 1.76
DNMT3A-210ENST00000474807 COL18A1P39060 1754 aa26.05■■□□□ 1.76
DNMT3A-210ENST00000474807 ZBTB7CA1YPR0 619 aa26.03■■□□□ 1.76
DNMT3A-210ENST00000474807 KCNH5Q8NCM2 988 aa26.03■■□□□ 1.76
DNMT3A-210ENST00000474807 THRAP3Q9Y2W1 955 aaKnown RBP26.03■■□□□ 1.76
DNMT3A-210ENST00000474807 PUS7Q96PZ0 661 aaKnown RBP26.02■■□□□ 1.76
DNMT3A-210ENST00000474807 TESK2Q96S53 571 aa26.02■■□□□ 1.76
DNMT3A-210ENST00000474807 RGPD1P0DJD0 1748 aa26.02■■□□□ 1.76
DNMT3A-210ENST00000474807 CRB1P82279 1406 aa26.01■■□□□ 1.75
DNMT3A-210ENST00000474807 ARHGEF25Q86VW2 580 aa26.01■■□□□ 1.75
DNMT3A-210ENST00000474807 ST20-MTHFSA0A0A6YYL1 179 aa26■■□□□ 1.75
DNMT3A-210ENST00000474807 BAG6P46379 1132 aa26■■□□□ 1.75
DNMT3A-210ENST00000474807 TMC1Q8TDI8 760 aa26■■□□□ 1.75
DNMT3A-210ENST00000474807 SLC12A5Q9H2X9 1139 aa26■■□□□ 1.75
DNMT3A-210ENST00000474807 AXIN2Q9Y2T1 843 aa26■■□□□ 1.75
DNMT3A-210ENST00000474807 NFAT5O94916 1531 aa25.98■■□□□ 1.75
DNMT3A-210ENST00000474807 USP31Q70CQ4 1352 aa25.98■■□□□ 1.75
DNMT3A-210ENST00000474807 FAM196AQ6ZSG2 479 aa25.98■■□□□ 1.75
DNMT3A-210ENST00000474807 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.97■■□□□ 1.75
DNMT3A-210ENST00000474807 TNS1Q9HBL0 1735 aaKnown RBP25.97■■□□□ 1.75
DNMT3A-210ENST00000474807 USP54Q70EL1 1684 aa25.96■■□□□ 1.75
DNMT3A-210ENST00000474807 SOX12O15370 315 aa25.96■■□□□ 1.75
DNMT3A-210ENST00000474807 PDE3BQ13370 1112 aa25.96■■□□□ 1.75
DNMT3A-210ENST00000474807 HDGFL2Q7Z4V5 671 aaPredicted RBP25.96■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms