RNA–Protein interactions for RNA: ENST00000474742.1

HDAC9-222, Transcript of histone deacetylase 9, human

TSL 3

Gene HDAC9, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC9-222	ENST00000474742	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	2.6	□□□□□ -1.99
HDAC9-222	ENST00000474742	FAM174A	Q8TBP5	190 aa		2.6	□□□□□ -1.99
HDAC9-222	ENST00000474742	UNC93B1	Q9H1C4	597 aa		2.6	□□□□□ -1.99
HDAC9-222	ENST00000474742	IRF6	O14896	467 aa		2.59	□□□□□ -1.99
HDAC9-222	ENST00000474742	ZIC2	O95409	532 aa	Predicted RBP	2.59	□□□□□ -1.99
HDAC9-222	ENST00000474742	LOR	P23490	312 aa	Predicted RBP	2.59	□□□□□ -1.99
HDAC9-222	ENST00000474742	CLCN1	P35523	988 aa		2.59	□□□□□ -1.99
HDAC9-222	ENST00000474742	MARS	P56192	900 aa	Known RBP	2.59	□□□□□ -1.99
HDAC9-222	ENST00000474742	RASSF7	Q02833	373 aa		2.59	□□□□□ -1.99
HDAC9-222	ENST00000474742	KCNMA1	Q12791	1236 aa		2.59	□□□□□ -1.99
HDAC9-222	ENST00000474742	MAP2K5	Q13163	448 aa		2.59	□□□□□ -1.99
HDAC9-222	ENST00000474742	GPAT2	Q6NUI2	795 aa		2.59	□□□□□ -1.99
HDAC9-222	ENST00000474742	SVOP	Q8N4V2	548 aa		2.59	□□□□□ -1.99
HDAC9-222	ENST00000474742	ZNF511	Q8NB15	262 aa		2.59	□□□□□ -1.99
HDAC9-222	ENST00000474742	PPFIA3	O75145	1194 aa		2.58	□□□□□ -2
HDAC9-222	ENST00000474742	TIMP2	P16035	220 aa		2.58	□□□□□ -2
HDAC9-222	ENST00000474742	KCNH2	Q12809	1159 aa		2.58	□□□□□ -2
HDAC9-222	ENST00000474742	PTPRN	Q16849	979 aa		2.58	□□□□□ -2
HDAC9-222	ENST00000474742	CNTNAP3B	Q96NU0	1288 aa		2.58	□□□□□ -2
HDAC9-222	ENST00000474742	CNTNAP3	Q9BZ76	1288 aa		2.58	□□□□□ -2
HDAC9-222	ENST00000474742	GPCPD1	Q9NPB8	672 aa		2.58	□□□□□ -2
HDAC9-222	ENST00000474742	EVA1B	Q9NVM1	165 aa		2.58	□□□□□ -2
HDAC9-222	ENST00000474742	CDC14C	A4D256	554 aa		2.57	□□□□□ -2
HDAC9-222	ENST00000474742	SPTLC1	O15269	473 aa		2.57	□□□□□ -2
HDAC9-222	ENST00000474742	VSIG8	P0DPA2	414 aa		2.57	□□□□□ -2
HDAC9-222	ENST00000474742	IRS1	P35568	1242 aa		2.57	□□□□□ -2
HDAC9-222	ENST00000474742	LINC00528	Q8N1L1	170 aa		2.57	□□□□□ -2
HDAC9-222	ENST00000474742	PRR7	Q8TB68	274 aa		2.57	□□□□□ -2
HDAC9-222	ENST00000474742	TSC1	Q92574	1164 aa		2.57	□□□□□ -2
HDAC9-222	ENST00000474742	ITPKC	Q96DU7	683 aa		2.57	□□□□□ -2
HDAC9-222	ENST00000474742	ZFAND3	Q9H8U3	227 aa		2.57	□□□□□ -2
HDAC9-222	ENST00000474742	ADAMTS8	Q9UP79	889 aa		2.57	□□□□□ -2
HDAC9-222	ENST00000474742	MINK1	Q8N4C8	1332 aa	Predicted RBP	2.57	□□□□□ -2
HDAC9-222	ENST00000474742	SPDYE5	A6NIY4	337 aa		2.56	□□□□□ -2
HDAC9-222	ENST00000474742	FIGNL2	A6NMB9	653 aa		2.56	□□□□□ -2
HDAC9-222	ENST00000474742	MAP3K10	Q02779	954 aa		2.56	□□□□□ -2
HDAC9-222	ENST00000474742	NR5A1	Q13285	461 aa		2.56	□□□□□ -2
HDAC9-222	ENST00000474742	MTMR2	Q13614	643 aa		2.56	□□□□□ -2
HDAC9-222	ENST00000474742	TTLL12	Q14166	644 aa	Predicted RBP	2.56	□□□□□ -2
HDAC9-222	ENST00000474742	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	2.56	□□□□□ -2
HDAC9-222	ENST00000474742	CCDC102A	Q96A19	550 aa		2.56	□□□□□ -2
HDAC9-222	ENST00000474742	FAM217B	Q9NTX9	383 aa	Predicted RBP	2.56	□□□□□ -2
HDAC9-222	ENST00000474742	PCDHGC3	Q9UN70	934 aa		2.56	□□□□□ -2
HDAC9-222	ENST00000474742	TTLL8	A6PVC2	850 aa		2.55	□□□□□ -2
HDAC9-222	ENST00000474742	IGHA1	P01876	353 aa		2.55	□□□□□ -2
HDAC9-222	ENST00000474742	NDUFV2	P19404	249 aa		2.55	□□□□□ -2
HDAC9-222	ENST00000474742	SSTR3	P32745	418 aa	Predicted RBP	2.55	□□□□□ -2
HDAC9-222	ENST00000474742	FOXK2	Q01167	660 aa		2.55	□□□□□ -2
HDAC9-222	ENST00000474742	KANK3	Q6NY19	840 aa		2.55	□□□□□ -2
HDAC9-222	ENST00000474742	VASH1	Q7L8A9	365 aa	Predicted RBP	2.55	□□□□□ -2
HDAC9-222	ENST00000474742	BPHL	Q86WA6	291 aa	Predicted RBP	2.55	□□□□□ -2
HDAC9-222	ENST00000474742	MPND	Q8N594	471 aa		2.55	□□□□□ -2
HDAC9-222	ENST00000474742	ZC3H15	Q8WU90	426 aa	Known RBP	2.55	□□□□□ -2
HDAC9-222	ENST00000474742	FOXJ1	Q92949	421 aa		2.55	□□□□□ -2
HDAC9-222	ENST00000474742	SCARF2	Q96GP6	870 aa	Predicted RBP	2.55	□□□□□ -2
HDAC9-222	ENST00000474742	TSEN34	Q9BSV6	310 aa	Known RBP	2.55	□□□□□ -2
HDAC9-222	ENST00000474742	COL25A1	Q9BXS0	654 aa	Predicted RBP	2.55	□□□□□ -2
HDAC9-222	ENST00000474742	DNMT3L	Q9UJW3	386 aa		2.55	□□□□□ -2
HDAC9-222	ENST00000474742	DNMT3A	Q9Y6K1	912 aa	Predicted RBP	2.55	□□□□□ -2
HDAC9-222	ENST00000474742	MAGEB6P1	A0A0J9YX57	407 aa		2.54	□□□□□ -2
HDAC9-222	ENST00000474742	MOXD2P	A6NHM9	499 aa		2.54	□□□□□ -2
HDAC9-222	ENST00000474742	ZMYND10	O75800	440 aa		2.54	□□□□□ -2
HDAC9-222	ENST00000474742	FSHR	P23945	695 aa		2.54	□□□□□ -2
HDAC9-222	ENST00000474742	PTS	Q03393	145 aa		2.54	□□□□□ -2
HDAC9-222	ENST00000474742	SV2A	Q7L0J3	742 aa		2.54	□□□□□ -2
HDAC9-222	ENST00000474742	MEIOB	Q8N635	442 aa		2.54	□□□□□ -2
HDAC9-222	ENST00000474742	GALNT6	Q8NCL4	622 aa		2.54	□□□□□ -2
HDAC9-222	ENST00000474742	ARMC2	Q8NEN0	867 aa		2.54	□□□□□ -2
HDAC9-222	ENST00000474742	SPIRE2	Q8WWL2	714 aa		2.54	□□□□□ -2
HDAC9-222	ENST00000474742	ENAM	Q9NRM1	1142 aa		2.54	□□□□□ -2
HDAC9-222	ENST00000474742	PGPEP1	Q9NXJ5	209 aa		2.54	□□□□□ -2
HDAC9-222	ENST00000474742	EMILIN1	Q9Y6C2	1016 aa		2.54	□□□□□ -2
HDAC9-222	ENST00000474742	SOS2	Q07890	1332 aa	Predicted RBP	2.53	□□□□□ -2
HDAC9-222	ENST00000474742	NUTM2B	A6NNL0	878 aa	Predicted RBP	2.53	□□□□□ -2
HDAC9-222	ENST00000474742	NUTM2E	B1AL46	878 aa	Predicted RBP	2.53	□□□□□ -2
HDAC9-222	ENST00000474742	MSTN	O14793	375 aa		2.53	□□□□□ -2
HDAC9-222	ENST00000474742	NR3C2	P08235	984 aa		2.53	□□□□□ -2
HDAC9-222	ENST00000474742	KRT76	Q01546	638 aa		2.53	□□□□□ -2
HDAC9-222	ENST00000474742	DIXDC1	Q155Q3	683 aa		2.53	□□□□□ -2
HDAC9-222	ENST00000474742	CSPP1	Q1MSJ5	1256 aa		2.53	□□□□□ -2
HDAC9-222	ENST00000474742	NUTM2D	Q5VT03	806 aa	Predicted RBP	2.53	□□□□□ -2
HDAC9-222	ENST00000474742	ZNF385C	Q66K41	422 aa	Predicted RBP	2.53	□□□□□ -2
HDAC9-222	ENST00000474742	DESI1	Q6ICB0	168 aa		2.53	□□□□□ -2
HDAC9-222	ENST00000474742	LYPD8	Q6UX82	237 aa		2.53	□□□□□ -2
HDAC9-222	ENST00000474742	BARGIN	Q6ZT62	677 aa		2.53	□□□□□ -2
HDAC9-222	ENST00000474742	NUTM2A	Q8IVF1	878 aa	Predicted RBP	2.53	□□□□□ -2
HDAC9-222	ENST00000474742	CCDC116	Q8IYX3	515 aa		2.53	□□□□□ -2
HDAC9-222	ENST00000474742	VWA5B2	Q8N398	1253 aa		2.53	□□□□□ -2
HDAC9-222	ENST00000474742	CCDC155	Q8N6L0	562 aa		2.53	□□□□□ -2
HDAC9-222	ENST00000474742	GPR161	Q8N6U8	529 aa	Known RBP	2.53	□□□□□ -2
HDAC9-222	ENST00000474742	CDK15	Q96Q40	435 aa		2.53	□□□□□ -2
HDAC9-222	ENST00000474742	KLF16	Q9BXK1	252 aa	Predicted RBP	2.53	□□□□□ -2
HDAC9-222	ENST00000474742	CARD14	Q9BXL6	1004 aa		2.53	□□□□□ -2
HDAC9-222	ENST00000474742	ZBTB3	Q9H5J0	574 aa		2.53	□□□□□ -2
HDAC9-222	ENST00000474742	MAP10	Q9P2G4	905 aa		2.53	□□□□□ -2
HDAC9-222	ENST00000474742	PHF20L1	A8MW92	1017 aa		2.52	□□□□□ -2.01
HDAC9-222	ENST00000474742	GSK3A	P49840	483 aa		2.52	□□□□□ -2.01
HDAC9-222	ENST00000474742	NBPF14	Q5TI25	921 aa		2.52	□□□□□ -2.01
HDAC9-222	ENST00000474742	PODN	Q7Z5L7	613 aa		2.52	□□□□□ -2.01
HDAC9-222	ENST00000474742	NEDD1	Q8NHV4	660 aa		2.52	□□□□□ -2.01

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