RNA–Protein interactions for RNA: ENST00000474707.1

RABGAP1-208, Transcript of RAB GTPase activating protein 1, humanhuman

TSL 3

Gene RABGAP1, Length 670 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGAP1-208ENST00000474707 SCARF1Q14162 830 aa9.47□□□□□ -0.89
RABGAP1-208ENST00000474707 PTPRNQ16849 979 aa9.47□□□□□ -0.89
RABGAP1-208ENST00000474707 PURBQ96QR8 312 aaKnown RBP9.47□□□□□ -0.89
RABGAP1-208ENST00000474707 MRPL14Q6P1L8 145 aaKnown RBP9.46□□□□□ -0.9
RABGAP1-208ENST00000474707 UNC93B1Q9H1C4 597 aa9.46□□□□□ -0.9
RABGAP1-208ENST00000474707 KRI1Q8N9T8 703 aaKnown RBP9.45□□□□□ -0.9
RABGAP1-208ENST00000474707 SPIRE2Q8WWL2 714 aa9.45□□□□□ -0.9
RABGAP1-208ENST00000474707 EVA1BQ9NVM1 165 aa9.45□□□□□ -0.9
RABGAP1-208ENST00000474707 PSMG3-AS1Q96PY0 264 aa9.44□□□□□ -0.9
RABGAP1-208ENST00000474707 KRTAP9-2Q9BYQ4 174 aa9.44□□□□□ -0.9
RABGAP1-208ENST00000474707 TLL2Q9Y6L7 1015 aa9.44□□□□□ -0.9
RABGAP1-208ENST00000474707 PPFIA3O75145 1194 aa9.43□□□□□ -0.9
RABGAP1-208ENST00000474707 NDUFV2P19404 249 aa9.43□□□□□ -0.9
RABGAP1-208ENST00000474707 SSTR3P32745 418 aaPredicted RBP9.43□□□□□ -0.9
RABGAP1-208ENST00000474707 FOXK2Q01167 660 aa9.43□□□□□ -0.9
RABGAP1-208ENST00000474707 KCNH2Q12809 1159 aa9.43□□□□□ -0.9
RABGAP1-208ENST00000474707 LINC01559Q495D7 138 aa9.43□□□□□ -0.9
RABGAP1-208ENST00000474707 BAP1Q92560 729 aa9.43□□□□□ -0.9
RABGAP1-208ENST00000474707 CNTNAP3BQ96NU0 1288 aa9.43□□□□□ -0.9
RABGAP1-208ENST00000474707 CNTNAP3Q9BZ76 1288 aa9.43□□□□□ -0.9
RABGAP1-208ENST00000474707 MPNDQ8N594 471 aa9.42□□□□□ -0.9
RABGAP1-208ENST00000474707 ZNF511Q8NB15 262 aa9.42□□□□□ -0.9
RABGAP1-208ENST00000474707 PRR7Q8TB68 274 aa9.42□□□□□ -0.9
RABGAP1-208ENST00000474707 KRTAP9-6A0A140TA67 174 aa9.41□□□□□ -0.9
RABGAP1-208ENST00000474707 MOXD2PA6NHM9 499 aa9.41□□□□□ -0.9
RABGAP1-208ENST00000474707 ADAM23O75077 832 aa9.41□□□□□ -0.9
RABGAP1-208ENST00000474707 KRT76Q01546 638 aa9.41□□□□□ -0.9
RABGAP1-208ENST00000474707 VARSP26640 1264 aaKnown RBP9.4□□□□□ -0.9
RABGAP1-208ENST00000474707 DESI1Q6ICB0 168 aa9.4□□□□□ -0.9
RABGAP1-208ENST00000474707 PLEKHG3A1L390 1219 aa9.39□□□□□ -0.91
RABGAP1-208ENST00000474707 MAN1A2O60476 641 aa9.39□□□□□ -0.91
RABGAP1-208ENST00000474707 NNTQ13423 1086 aa9.39□□□□□ -0.91
RABGAP1-208ENST00000474707 MTMR2Q13614 643 aa9.38□□□□□ -0.91
RABGAP1-208ENST00000474707 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.38□□□□□ -0.91
RABGAP1-208ENST00000474707 GPR161Q8N6U8 529 aaKnown RBP9.38□□□□□ -0.91
RABGAP1-208ENST00000474707 SPDYE5A6NIY4 337 aa9.37□□□□□ -0.91
RABGAP1-208ENST00000474707 TIMP2P16035 220 aa9.37□□□□□ -0.91
RABGAP1-208ENST00000474707 ZNF385CQ66K41 422 aaPredicted RBP9.37□□□□□ -0.91
RABGAP1-208ENST00000474707 SVOPQ8N4V2 548 aa9.37□□□□□ -0.91
RABGAP1-208ENST00000474707 KANK3Q6NY19 840 aa9.36□□□□□ -0.91
RABGAP1-208ENST00000474707 VSIG10Q8N0Z9 540 aa9.36□□□□□ -0.91
RABGAP1-208ENST00000474707 ADH1CP00326 375 aa9.35□□□□□ -0.91
RABGAP1-208ENST00000474707 MARSP56192 900 aaKnown RBP9.35□□□□□ -0.91
RABGAP1-208ENST00000474707 WDR4P57081 412 aaKnown RBP9.35□□□□□ -0.91
RABGAP1-208ENST00000474707 TTLL12Q14166 644 aaPredicted RBP9.35□□□□□ -0.91
RABGAP1-208ENST00000474707 AMHR2Q16671 573 aa9.35□□□□□ -0.91
RABGAP1-208ENST00000474707 KLF16Q9BXK1 252 aaPredicted RBP9.35□□□□□ -0.91
RABGAP1-208ENST00000474707 GJA5P36382 358 aa9.33□□□□□ -0.92
RABGAP1-208ENST00000474707 LYPD8Q6UX82 237 aa9.33□□□□□ -0.92
RABGAP1-208ENST00000474707 GIGYF2Q6Y7W6 1299 aaKnown RBP9.33□□□□□ -0.92
RABGAP1-208ENST00000474707 FAM174AQ8TBP5 190 aa9.33□□□□□ -0.92
RABGAP1-208ENST00000474707 BARGINQ6ZT62 677 aa9.32□□□□□ -0.92
RABGAP1-208ENST00000474707 KRTAP1-3Q8IUG1 177 aa9.32□□□□□ -0.92
RABGAP1-208ENST00000474707 CDK15Q96Q40 435 aa9.32□□□□□ -0.92
RABGAP1-208ENST00000474707 MSTNO14793 375 aa9.31□□□□□ -0.92
RABGAP1-208ENST00000474707 CTHP32929 405 aa9.31□□□□□ -0.92
RABGAP1-208ENST00000474707 RSBN1LQ6PCB5 846 aaPredicted RBP9.31□□□□□ -0.92
RABGAP1-208ENST00000474707 WHAMMQ8TF30 809 aa9.31□□□□□ -0.92
RABGAP1-208ENST00000474707 BEGAINQ9BUH8 593 aa9.31□□□□□ -0.92
RABGAP1-208ENST00000474707 COL25A1Q9BXS0 654 aaPredicted RBP9.31□□□□□ -0.92
RABGAP1-208ENST00000474707 CFAP99D6REC4 459 aa9.3□□□□□ -0.92
RABGAP1-208ENST00000474707 ZMYND10O75800 440 aa9.3□□□□□ -0.92
RABGAP1-208ENST00000474707 ARHGEF15O94989 841 aa9.3□□□□□ -0.92
RABGAP1-208ENST00000474707 F12P00748 615 aaPredicted RBP9.3□□□□□ -0.92
RABGAP1-208ENST00000474707 C6orf118Q5T5N4 469 aa9.3□□□□□ -0.92
RABGAP1-208ENST00000474707 FOXJ1Q92949 421 aa9.3□□□□□ -0.92
RABGAP1-208ENST00000474707 TBC1D2Q9BYX2 928 aa9.3□□□□□ -0.92
RABGAP1-208ENST00000474707 SCARF2Q96GP6 870 aaPredicted RBP9.29□□□□□ -0.92
RABGAP1-208ENST00000474707 PCDHB15Q9Y5E8 787 aa9.29□□□□□ -0.92
RABGAP1-208ENST00000474707 ZFAND3Q9H8U3 227 aa9.28□□□□□ -0.92
RABGAP1-208ENST00000474707 MAP10Q9P2G4 905 aa9.28□□□□□ -0.92
RABGAP1-208ENST00000474707 SPTLC1O15269 473 aa9.27□□□□□ -0.93
RABGAP1-208ENST00000474707 ZIC2O95409 532 aaPredicted RBP9.27□□□□□ -0.93
RABGAP1-208ENST00000474707 HRCP23327 699 aa9.27□□□□□ -0.93
RABGAP1-208ENST00000474707 DIXDC1Q155Q3 683 aa9.27□□□□□ -0.93
RABGAP1-208ENST00000474707 ITPKCQ96DU7 683 aa9.27□□□□□ -0.93
RABGAP1-208ENST00000474707 NR3C2P08235 984 aa9.26□□□□□ -0.93
RABGAP1-208ENST00000474707 NR5A1Q13285 461 aa9.26□□□□□ -0.93
RABGAP1-208ENST00000474707 ARID5BQ14865 1188 aa9.26□□□□□ -0.93
RABGAP1-208ENST00000474707 C4orf48Q5BLP8 95 aa9.26□□□□□ -0.93
RABGAP1-208ENST00000474707 Q8N3U1 123 aa9.26□□□□□ -0.93
RABGAP1-208ENST00000474707 ZBTB3Q9H5J0 574 aa9.26□□□□□ -0.93
RABGAP1-208ENST00000474707 GRM5P41594 1212 aa9.25□□□□□ -0.93
RABGAP1-208ENST00000474707 SPOCK3Q9BQ16 436 aa9.25□□□□□ -0.93
RABGAP1-208ENST00000474707 PLA2G4EQ3MJ16 856 aa9.24□□□□□ -0.93
RABGAP1-208ENST00000474707 RNFT1Q5M7Z0 435 aa9.24□□□□□ -0.93
RABGAP1-208ENST00000474707 PARP9Q8IXQ6 854 aa9.24□□□□□ -0.93
RABGAP1-208ENST00000474707 PRPF38BQ5VTL8 546 aaKnown RBP9.23□□□□□ -0.93
RABGAP1-208ENST00000474707 ZC3H15Q8WU90 426 aaKnown RBP9.23□□□□□ -0.93
RABGAP1-208ENST00000474707 PER1O15534 1290 aaPredicted RBP9.22□□□□□ -0.93
RABGAP1-208ENST00000474707 BMP2P12643 396 aa9.22□□□□□ -0.93
RABGAP1-208ENST00000474707 CABLES1Q8TDN4 633 aa9.22□□□□□ -0.93
RABGAP1-208ENST00000474707 SLURP2P0DP57 97 aa9.21□□□□□ -0.94
RABGAP1-208ENST00000474707 RIC3Q7Z5B4 369 aa9.21□□□□□ -0.94
RABGAP1-208ENST00000474707 BPHLQ86WA6 291 aaPredicted RBP9.21□□□□□ -0.94
RABGAP1-208ENST00000474707 MEIOBQ8N635 442 aa9.21□□□□□ -0.94
RABGAP1-208ENST00000474707 AGERQ15109 404 aa9.2□□□□□ -0.94
RABGAP1-208ENST00000474707 LINC00528Q8N1L1 170 aa9.2□□□□□ -0.94
RABGAP1-208ENST00000474707 C1QTNF2Q9BXJ5 285 aa9.2□□□□□ -0.94
RABGAP1-208ENST00000474707 DNMT3LQ9UJW3 386 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms