RNA–Protein interactions for RNA: ENST00000474684.1

CPSF7-210, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 635 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-210ENST00000474684 STK26Q9P289 416 aa8.81□□□□□ -1
CPSF7-210ENST00000474684 ABCC11Q96J66 1382 aa8.81□□□□□ -1
CPSF7-210ENST00000474684 AFF2P51816 1311 aa8.8□□□□□ -1
CPSF7-210ENST00000474684 NRAPQ86VF7 1730 aa8.8□□□□□ -1
CPSF7-210ENST00000474684 NUTM2FA1L443 756 aa8.8□□□□□ -1
CPSF7-210ENST00000474684 CDK12Q9NYV4 1490 aaPredicted RBP8.79□□□□□ -1
CPSF7-210ENST00000474684 C7P10643 843 aa8.79□□□□□ -1
CPSF7-210ENST00000474684 XPCQ01831 940 aaPredicted RBP8.79□□□□□ -1
CPSF7-210ENST00000474684 NWD2Q9ULI1 1742 aa8.79□□□□□ -1
CPSF7-210ENST00000474684 GLI3P10071 1580 aa8.78□□□□□ -1
CPSF7-210ENST00000474684 DHX57Q6P158 1386 aaKnown RBP8.78□□□□□ -1
CPSF7-210ENST00000474684 CFAP70Q5T0N1 1121 aa8.78□□□□□ -1
CPSF7-210ENST00000474684 SLC39A7Q92504 469 aa8.78□□□□□ -1
CPSF7-210ENST00000474684 PHRF1Q9P1Y6 1649 aaKnown RBP8.78□□□□□ -1
CPSF7-210ENST00000474684 EP400Q96L91 3159 aa8.78□□□□□ -1
CPSF7-210ENST00000474684 QRICH2Q9H0J4 1663 aa8.78□□□□□ -1
CPSF7-210ENST00000474684 TULP4Q9NRJ4 1543 aa8.77□□□□□ -1.01
CPSF7-210ENST00000474684 LRRC59Q96AG4 307 aaKnown RBP8.77□□□□□ -1.01
CPSF7-210ENST00000474684 C8orf37Q96NL8 207 aa8.77□□□□□ -1.01
CPSF7-210ENST00000474684 C14orf93Q9H972 538 aaKnown RBP8.77□□□□□ -1.01
CPSF7-210ENST00000474684 ADAMTS2O95450 1211 aa8.76□□□□□ -1.01
CPSF7-210ENST00000474684 ZNF772Q68DY9 489 aaPredicted RBP8.76□□□□□ -1.01
CPSF7-210ENST00000474684 ASTLQ6HA08 431 aaPredicted RBP8.76□□□□□ -1.01
CPSF7-210ENST00000474684 PHF12Q96QT6 1004 aa8.76□□□□□ -1.01
CPSF7-210ENST00000474684 NPHP3Q7Z494 1330 aa8.76□□□□□ -1.01
CPSF7-210ENST00000474684 ATRNO75882 1429 aa8.75□□□□□ -1.01
CPSF7-210ENST00000474684 TNS3Q68CZ2 1445 aa8.75□□□□□ -1.01
CPSF7-210ENST00000474684 SAFB2Q14151 953 aaKnown RBP eCLIP8.75□□□□□ -1.01
CPSF7-210ENST00000474684 ESCO1Q5FWF5 840 aa8.75□□□□□ -1.01
CPSF7-210ENST00000474684 METRNQ9UJH8 293 aa8.75□□□□□ -1.01
CPSF7-210ENST00000474684 TRPM1Q7Z4N2 1603 aa8.75□□□□□ -1.01
CPSF7-210ENST00000474684 ATP7BP35670 1465 aa8.75□□□□□ -1.01
CPSF7-210ENST00000474684 FOXO3O43524 673 aa8.74□□□□□ -1.01
CPSF7-210ENST00000474684 PRAM1Q96QH2 718 aa8.74□□□□□ -1.01
CPSF7-210ENST00000474684 PRR36Q9H6K5 1346 aa8.74□□□□□ -1.01
CPSF7-210ENST00000474684 ANKARQ7Z5J8 1434 aa8.73□□□□□ -1.01
CPSF7-210ENST00000474684 BCL9LQ86UU0 1499 aa8.73□□□□□ -1.01
CPSF7-210ENST00000474684 PELP1Q8IZL8 1130 aaKnown RBP8.73□□□□□ -1.01
CPSF7-210ENST00000474684 SLIT2O94813 1529 aa8.73□□□□□ -1.01
CPSF7-210ENST00000474684 COL14A1Q05707 1796 aaKnown RBP8.72□□□□□ -1.01
CPSF7-210ENST00000474684 SCUBE2Q9NQ36 999 aa8.72□□□□□ -1.01
CPSF7-210ENST00000474684 SPATA31A3Q5VYP0 1347 aa8.72□□□□□ -1.01
CPSF7-210ENST00000474684 NRKQ7Z2Y5 1582 aa8.71□□□□□ -1.02
CPSF7-210ENST00000474684 RXRBP28702 533 aa8.71□□□□□ -1.02
CPSF7-210ENST00000474684 UPF1Q92900 1129 aaKnown RBP eCLIP8.71□□□□□ -1.02
CPSF7-210ENST00000474684 HIRIP3Q9BW71 556 aaPredicted RBP8.71□□□□□ -1.02
CPSF7-210ENST00000474684 TRAK1Q9UPV9 953 aa8.71□□□□□ -1.02
CPSF7-210ENST00000474684 KDM2AQ9Y2K7 1162 aa8.71□□□□□ -1.02
CPSF7-210ENST00000474684 MINK1Q8N4C8 1332 aaPredicted RBP8.71□□□□□ -1.02
CPSF7-210ENST00000474684 ACIN1Q9UKV3 1341 aaKnown RBP8.71□□□□□ -1.02
CPSF7-210ENST00000474684 AKAP12Q02952 1782 aa8.71□□□□□ -1.02
CPSF7-210ENST00000474684 DCAF11Q8TEB1 546 aa8.7□□□□□ -1.02
CPSF7-210ENST00000474684 NGLY1Q96IV0 654 aa8.7□□□□□ -1.02
CPSF7-210ENST00000474684 WNK3Q9BYP7 1800 aa8.7□□□□□ -1.02
CPSF7-210ENST00000474684 RALGAPBQ86X10 1494 aa8.7□□□□□ -1.02
CPSF7-210ENST00000474684 ATMINO43313 823 aaPredicted RBP8.69□□□□□ -1.02
CPSF7-210ENST00000474684 PLEKHG5O94827 1062 aa8.69□□□□□ -1.02
CPSF7-210ENST00000474684 RBM6P78332 1123 aaKnown RBP8.69□□□□□ -1.02
CPSF7-210ENST00000474684 FNBP4Q8N3X1 1017 aaPredicted RBP8.69□□□□□ -1.02
CPSF7-210ENST00000474684 PMFBP1Q8TBY8 1022 aa8.69□□□□□ -1.02
CPSF7-210ENST00000474684 SIRT1Q96EB6 747 aa8.69□□□□□ -1.02
CPSF7-210ENST00000474684 QTRT2Q9H974 415 aaKnown RBP8.69□□□□□ -1.02
CPSF7-210ENST00000474684 USP21Q9UK80 565 aa8.69□□□□□ -1.02
CPSF7-210ENST00000474684 PHF8Q9UPP1 1060 aa8.69□□□□□ -1.02
CPSF7-210ENST00000474684 THSD7AQ9UPZ6 1657 aa8.69□□□□□ -1.02
CPSF7-210ENST00000474684 TNS1Q9HBL0 1735 aaKnown RBP8.68□□□□□ -1.02
CPSF7-210ENST00000474684 KRT28Q7Z3Y7 464 aa8.68□□□□□ -1.02
CPSF7-210ENST00000474684 CABLES1Q8TDN4 633 aa8.68□□□□□ -1.02
CPSF7-210ENST00000474684 POGKQ9P215 609 aa8.68□□□□□ -1.02
CPSF7-210ENST00000474684 SBNO1A3KN83 1393 aa8.68□□□□□ -1.02
CPSF7-210ENST00000474684 RGPD5Q99666 1765 aa8.68□□□□□ -1.02
CPSF7-210ENST00000474684 PIK3C2AO00443 1686 aa8.67□□□□□ -1.02
CPSF7-210ENST00000474684 HRCP23327 699 aa8.67□□□□□ -1.02
CPSF7-210ENST00000474684 LMO7Q8WWI1 1683 aa8.67□□□□□ -1.02
CPSF7-210ENST00000474684 MON2Q7Z3U7 1717 aa8.66□□□□□ -1.02
CPSF7-210ENST00000474684 EIF3AQ14152 1382 aaKnown RBP8.66□□□□□ -1.02
CPSF7-210ENST00000474684 TRPC5Q9UL62 973 aaPredicted RBP8.66□□□□□ -1.02
CPSF7-210ENST00000474684 RGPD1P0DJD0 1748 aa8.66□□□□□ -1.02
CPSF7-210ENST00000474684 ARHGEF10O15013 1369 aa8.65□□□□□ -1.02
CPSF7-210ENST00000474684 WASLO00401 505 aaPredicted RBP8.65□□□□□ -1.02
CPSF7-210ENST00000474684 POTEJP0CG39 1038 aa8.65□□□□□ -1.02
CPSF7-210ENST00000474684 NBPF1Q3BBV0 1214 aa8.65□□□□□ -1.02
CPSF7-210ENST00000474684 FAM163AQ96GL9 167 aaPredicted RBP8.65□□□□□ -1.02
CPSF7-210ENST00000474684 MS4A3Q96HJ5 214 aa8.65□□□□□ -1.02
CPSF7-210ENST00000474684 ATAD2Q6PL18 1390 aa8.64□□□□□ -1.03
CPSF7-210ENST00000474684 COL18A1P39060 1754 aa8.63□□□□□ -1.03
CPSF7-210ENST00000474684 MNX1P50219 401 aaPredicted RBP8.63□□□□□ -1.03
CPSF7-210ENST00000474684 LCE2DQ5TA82 110 aaPredicted RBP8.63□□□□□ -1.03
CPSF7-210ENST00000474684 LMOD2Q6P5Q4 547 aa8.63□□□□□ -1.03
CPSF7-210ENST00000474684 SBF2Q86WG5 1849 aa8.62□□□□□ -1.03
CPSF7-210ENST00000474684 UNC5CLQ8IV45 518 aa8.62□□□□□ -1.03
CPSF7-210ENST00000474684 GJD4Q96KN9 370 aaPredicted RBP8.62□□□□□ -1.03
CPSF7-210ENST00000474684 SIN3AQ96ST3 1273 aa8.62□□□□□ -1.03
CPSF7-210ENST00000474684 LTN1O94822 1766 aa8.62□□□□□ -1.03
CPSF7-210ENST00000474684 USP54Q70EL1 1684 aa8.62□□□□□ -1.03
CPSF7-210ENST00000474684 POLR3AO14802 1390 aaPredicted RBP8.61□□□□□ -1.03
CPSF7-210ENST00000474684 GPRASP1Q5JY77 1395 aa8.61□□□□□ -1.03
CPSF7-210ENST00000474684 PARP4Q9UKK3 1724 aaKnown RBP8.61□□□□□ -1.03
CPSF7-210ENST00000474684 HAP1P54257 671 aaPredicted RBP8.61□□□□□ -1.03
CPSF7-210ENST00000474684 PSME1Q06323 249 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms