RNA–Protein interactions for RNA: ENST00000474593.1

KHDC1-204, Transcript of KH domain containing 1, humanhuman

TSL 5

Gene KHDC1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1-204ENST00000474593 ARHGEF28Q8N1W1 1705 aaKnown RBP8.43□□□□□ -1.06
KHDC1-204ENST00000474593 FAM83GA6ND36 823 aa8.42□□□□□ -1.06
KHDC1-204ENST00000474593 SOCS7O14512 581 aa8.42□□□□□ -1.06
KHDC1-204ENST00000474593 ZC3H6P61129 1189 aaKnown RBP8.42□□□□□ -1.06
KHDC1-204ENST00000474593 EIF4G2P78344 907 aaKnown RBP eCLIP8.42□□□□□ -1.06
KHDC1-204ENST00000474593 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.42□□□□□ -1.06
KHDC1-204ENST00000474593 FNBP4Q8N3X1 1017 aaPredicted RBP8.42□□□□□ -1.06
KHDC1-204ENST00000474593 SLC12A5Q9H2X9 1139 aa8.42□□□□□ -1.06
KHDC1-204ENST00000474593 ATAD2Q6PL18 1390 aa8.42□□□□□ -1.06
KHDC1-204ENST00000474593 RALGAPBQ86X10 1494 aa8.42□□□□□ -1.06
KHDC1-204ENST00000474593 KIF1AQ12756 1690 aa8.41□□□□□ -1.06
KHDC1-204ENST00000474593 TNS3Q68CZ2 1445 aa8.41□□□□□ -1.06
KHDC1-204ENST00000474593 RBM6P78332 1123 aaKnown RBP8.41□□□□□ -1.06
KHDC1-204ENST00000474593 PUS7Q96PZ0 661 aaKnown RBP8.41□□□□□ -1.06
KHDC1-204ENST00000474593 PRDM11Q9NQV5 511 aa8.41□□□□□ -1.06
KHDC1-204ENST00000474593 SHPRHQ149N8 1683 aa8.4□□□□□ -1.06
KHDC1-204ENST00000474593 ADGRB2O60241 1585 aa8.4□□□□□ -1.06
KHDC1-204ENST00000474593 POLR3AO14802 1390 aaPredicted RBP8.4□□□□□ -1.06
KHDC1-204ENST00000474593 KTN1Q86UP2 1357 aaKnown RBP8.4□□□□□ -1.06
KHDC1-204ENST00000474593 USP47Q96K76 1375 aa8.4□□□□□ -1.06
KHDC1-204ENST00000474593 A0A0G2JS52 829 aa8.4□□□□□ -1.06
KHDC1-204ENST00000474593 SOX12O15370 315 aa8.4□□□□□ -1.06
KHDC1-204ENST00000474593 MYT1Q01538 1121 aa8.4□□□□□ -1.06
KHDC1-204ENST00000474593 UNC5CLQ8IV45 518 aa8.4□□□□□ -1.06
KHDC1-204ENST00000474593 BTG4Q9NY30 223 aa8.4□□□□□ -1.06
KHDC1-204ENST00000474593 QRICH2Q9H0J4 1663 aa8.4□□□□□ -1.07
KHDC1-204ENST00000474593 LRP6O75581 1613 aa8.4□□□□□ -1.07
KHDC1-204ENST00000474593 ATP7BP35670 1465 aa8.39□□□□□ -1.07
KHDC1-204ENST00000474593 GCP02774 474 aa8.39□□□□□ -1.07
KHDC1-204ENST00000474593 CHRNA2Q15822 529 aa8.39□□□□□ -1.07
KHDC1-204ENST00000474593 TESK2Q96S53 571 aa8.39□□□□□ -1.07
KHDC1-204ENST00000474593 STRN4Q9NRL3 753 aa8.39□□□□□ -1.07
KHDC1-204ENST00000474593 BRD4O60885 1362 aaPredicted RBP8.38□□□□□ -1.07
KHDC1-204ENST00000474593 TTC21BQ7Z4L5 1316 aa8.38□□□□□ -1.07
KHDC1-204ENST00000474593 KCNH5Q8NCM2 988 aa8.38□□□□□ -1.07
KHDC1-204ENST00000474593 GJD4Q96KN9 370 aaPredicted RBP8.38□□□□□ -1.07
KHDC1-204ENST00000474593 USP32Q8NFA0 1604 aa8.38□□□□□ -1.07
KHDC1-204ENST00000474593 SBNO2Q9Y2G9 1366 aa8.37□□□□□ -1.07
KHDC1-204ENST00000474593 TTC21AQ8NDW8 1320 aa8.37□□□□□ -1.07
KHDC1-204ENST00000474593 HSPA5P11021 654 aaKnown RBP8.37□□□□□ -1.07
KHDC1-204ENST00000474593 ITSN1Q15811 1721 aa8.37□□□□□ -1.07
KHDC1-204ENST00000474593 USP35Q9P2H5 1018 aa8.36□□□□□ -1.07
KHDC1-204ENST00000474593 USP6P35125 1406 aa8.36□□□□□ -1.07
KHDC1-204ENST00000474593 KIAA0232Q92628 1395 aa8.35□□□□□ -1.07
KHDC1-204ENST00000474593 CSB-PGBD3P0DP91 1061 aa8.35□□□□□ -1.07
KHDC1-204ENST00000474593 VPS72Q15906 364 aa8.35□□□□□ -1.07
KHDC1-204ENST00000474593 NME9Q86XW9 330 aa8.35□□□□□ -1.07
KHDC1-204ENST00000474593 COG3Q96JB2 828 aa8.35□□□□□ -1.07
KHDC1-204ENST00000474593 FAM98CQ17RN3 349 aaKnown RBP8.34□□□□□ -1.07
KHDC1-204ENST00000474593 ZRANB1Q9UGI0 708 aa8.34□□□□□ -1.07
KHDC1-204ENST00000474593 NINLQ9Y2I6 1382 aa8.34□□□□□ -1.07
KHDC1-204ENST00000474593 BCL9LQ86UU0 1499 aa8.33□□□□□ -1.08
KHDC1-204ENST00000474593 COL22A1Q8NFW1 1626 aaPredicted RBP8.33□□□□□ -1.08
KHDC1-204ENST00000474593 SEPT12Q8IYM1 358 aa8.33□□□□□ -1.08
KHDC1-204ENST00000474593 CPSF1Q10570 1443 aaKnown RBP8.32□□□□□ -1.08
KHDC1-204ENST00000474593 TOM1L2Q6ZVM7 507 aa8.32□□□□□ -1.08
KHDC1-204ENST00000474593 USP19O94966 1318 aa8.31□□□□□ -1.08
KHDC1-204ENST00000474593 AMPHP49418 695 aa8.31□□□□□ -1.08
KHDC1-204ENST00000474593 PDE3BQ13370 1112 aa8.31□□□□□ -1.08
KHDC1-204ENST00000474593 LARP1Q6PKG0 1096 aaKnown RBP8.31□□□□□ -1.08
KHDC1-204ENST00000474593 ARHGEF25Q86VW2 580 aa8.31□□□□□ -1.08
KHDC1-204ENST00000474593 GGNBP2Q9H3C7 697 aa8.31□□□□□ -1.08
KHDC1-204ENST00000474593 A0A1W2PP64 1363 aa8.31□□□□□ -1.08
KHDC1-204ENST00000474593 TRPM3Q9HCF6 1732 aaPredicted RBP8.31□□□□□ -1.08
KHDC1-204ENST00000474593 ATRNO75882 1429 aa8.3□□□□□ -1.08
KHDC1-204ENST00000474593 EDC4Q6P2E9 1401 aaKnown RBP8.3□□□□□ -1.08
KHDC1-204ENST00000474593 SLIT2O94813 1529 aa8.3□□□□□ -1.08
KHDC1-204ENST00000474593 FYB1O15117 783 aa8.3□□□□□ -1.08
KHDC1-204ENST00000474593 SF3B2Q13435 895 aaKnown RBP8.3□□□□□ -1.08
KHDC1-204ENST00000474593 KRT27Q7Z3Y8 459 aa8.3□□□□□ -1.08
KHDC1-204ENST00000474593 LTV1Q96GA3 475 aaPredicted RBP8.3□□□□□ -1.08
KHDC1-204ENST00000474593 PANK3Q9H999 370 aa8.3□□□□□ -1.08
KHDC1-204ENST00000474593 ANKRD36BQ8N2N9 1353 aa8.3□□□□□ -1.08
KHDC1-204ENST00000474593 ALS2Q96Q42 1657 aa8.3□□□□□ -1.08
KHDC1-204ENST00000474593 CGNL1Q0VF96 1302 aa8.29□□□□□ -1.08
KHDC1-204ENST00000474593 SPATA31A5Q5VU36 1347 aa8.29□□□□□ -1.08
KHDC1-204ENST00000474593 SPATA31A7Q8IWB4 1347 aa8.29□□□□□ -1.08
KHDC1-204ENST00000474593 SSH2Q76I76 1423 aa8.29□□□□□ -1.08
KHDC1-204ENST00000474593 PPM1GO15355 546 aaPredicted RBP8.29□□□□□ -1.08
KHDC1-204ENST00000474593 ONECUT3O60422 494 aaPredicted RBP8.29□□□□□ -1.08
KHDC1-204ENST00000474593 TCP11L2Q8N4U5 519 aa8.29□□□□□ -1.08
KHDC1-204ENST00000474593 CARD14Q9BXL6 1004 aa8.29□□□□□ -1.08
KHDC1-204ENST00000474593 NLRP2Q9NX02 1062 aa8.29□□□□□ -1.08
KHDC1-204ENST00000474593 AXIN2Q9Y2T1 843 aa8.29□□□□□ -1.08
KHDC1-204ENST00000474593 KNSTRNQ9Y448 316 aa8.29□□□□□ -1.08
KHDC1-204ENST00000474593 CPDO75976 1380 aa8.29□□□□□ -1.08
KHDC1-204ENST00000474593 AATKQ6ZMQ8 1374 aa8.29□□□□□ -1.08
KHDC1-204ENST00000474593 TOPAZ1Q8N9V7 1692 aa8.29□□□□□ -1.08
KHDC1-204ENST00000474593 SPATA31A1Q5TZJ5 1347 aa8.29□□□□□ -1.08
KHDC1-204ENST00000474593 C11orf95C9JLR9 678 aaPredicted RBP8.28□□□□□ -1.08
KHDC1-204ENST00000474593 TNNT2P45379 298 aaPredicted RBP8.28□□□□□ -1.08
KHDC1-204ENST00000474593 CNGB1Q14028 1251 aaPredicted RBP8.28□□□□□ -1.08
KHDC1-204ENST00000474593 CCDC125Q86Z20 511 aa8.28□□□□□ -1.08
KHDC1-204ENST00000474593 UPF1Q92900 1129 aaKnown RBP eCLIP8.28□□□□□ -1.08
KHDC1-204ENST00000474593 THRAP3Q9Y2W1 955 aaKnown RBP8.28□□□□□ -1.08
KHDC1-204ENST00000474593 CDK12Q9NYV4 1490 aaPredicted RBP8.27□□□□□ -1.09
KHDC1-204ENST00000474593 USP31Q70CQ4 1352 aa8.27□□□□□ -1.09
KHDC1-204ENST00000474593 MARF1Q9Y4F3 1742 aaKnown RBP8.27□□□□□ -1.09
KHDC1-204ENST00000474593 FBLN1P23142 703 aa8.27□□□□□ -1.09
KHDC1-204ENST00000474593 IP6K1Q92551 441 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms