RNA–Protein interactions for RNA: ENST00000474323.5

SAMM50-203, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 2,368 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-203ENST00000474323 DDX11L8A8MPP1 907 aa18.4■□□□□ 0.54
SAMM50-203ENST00000474323 TMEM132EQ6IEE7 984 aa18.4■□□□□ 0.54
SAMM50-203ENST00000474323 SPATA31D1Q6ZQQ2 1576 aa18.38■□□□□ 0.53
SAMM50-203ENST00000474323 TRIM44Q96DX7 344 aaPredicted RBP18.38■□□□□ 0.53
SAMM50-203ENST00000474323 DNAJC5Q9H3Z4 198 aa18.37■□□□□ 0.53
SAMM50-203ENST00000474323 ERBB4Q15303 1308 aa18.37■□□□□ 0.53
SAMM50-203ENST00000474323 SETBP1Q9Y6X0 1596 aa18.37■□□□□ 0.53
SAMM50-203ENST00000474323 TRAK1Q9UPV9 953 aa18.37■□□□□ 0.53
SAMM50-203ENST00000474323 COG6Q9Y2V7 657 aa18.36■□□□□ 0.53
SAMM50-203ENST00000474323 APAF1O14727 1248 aa18.35■□□□□ 0.53
SAMM50-203ENST00000474323 ADGRB1O14514 1584 aa18.35■□□□□ 0.53
SAMM50-203ENST00000474323 CANXP27824 592 aaKnown RBP18.34■□□□□ 0.53
SAMM50-203ENST00000474323 PDE4CQ08493 712 aa18.34■□□□□ 0.53
SAMM50-203ENST00000474323 PANK1Q8TE04 598 aa18.34■□□□□ 0.53
SAMM50-203ENST00000474323 CCDC146Q8IYE0 955 aa18.33■□□□□ 0.53
SAMM50-203ENST00000474323 SPRYD3Q8NCJ5 442 aa18.33■□□□□ 0.53
SAMM50-203ENST00000474323 NPC1L1Q9UHC9 1359 aa18.32■□□□□ 0.52
SAMM50-203ENST00000474323 PDZRN3Q9UPQ7 1066 aa18.32■□□□□ 0.52
SAMM50-203ENST00000474323 ZFYVE9O95405 1425 aa18.32■□□□□ 0.52
SAMM50-203ENST00000474323 A2ML1A8K2U0 1454 aa18.31■□□□□ 0.52
SAMM50-203ENST00000474323 CDCA8Q53HL2 280 aa18.31■□□□□ 0.52
SAMM50-203ENST00000474323 C22orf23Q9BZE7 217 aa18.31■□□□□ 0.52
SAMM50-203ENST00000474323 ASXL1Q8IXJ9 1541 aa18.3■□□□□ 0.52
SAMM50-203ENST00000474323 RWDD1Q9H446 243 aaPredicted RBP18.3■□□□□ 0.52
SAMM50-203ENST00000474323 MYO3AQ8NEV4 1616 aa18.29■□□□□ 0.52
SAMM50-203ENST00000474323 CALD1Q05682 793 aaKnown RBP18.29■□□□□ 0.52
SAMM50-203ENST00000474323 ZNF692Q9BU19 519 aaPredicted RBP18.29■□□□□ 0.52
SAMM50-203ENST00000474323 PCDHB15Q9Y5E8 787 aa18.29■□□□□ 0.52
SAMM50-203ENST00000474323 CEBPAP49715 358 aaPredicted RBP18.28■□□□□ 0.52
SAMM50-203ENST00000474323 KDM5AP29375 1690 aaKnown RBP18.27■□□□□ 0.52
SAMM50-203ENST00000474323 TNRQ92752 1358 aa18.27■□□□□ 0.52
SAMM50-203ENST00000474323 SKOR2Q2VWA4 1001 aaPredicted RBP18.27■□□□□ 0.52
SAMM50-203ENST00000474323 HSCBQ8IWL3 235 aa18.27■□□□□ 0.52
SAMM50-203ENST00000474323 PTMSP20962 102 aa18.27■□□□□ 0.52
SAMM50-203ENST00000474323 TERF1P54274 439 aa18.27■□□□□ 0.52
SAMM50-203ENST00000474323 STK26Q9P289 416 aa18.27■□□□□ 0.52
SAMM50-203ENST00000474323 QRICH2Q9H0J4 1663 aa18.27■□□□□ 0.51
SAMM50-203ENST00000474323 KIAA1211Q6ZU35 1233 aa18.26■□□□□ 0.51
SAMM50-203ENST00000474323 DMRT2Q9Y5R5 561 aa18.26■□□□□ 0.51
SAMM50-203ENST00000474323 DDIT3P35638 169 aa18.26■□□□□ 0.51
SAMM50-203ENST00000474323 RIMS2Q9UQ26 1411 aa18.26■□□□□ 0.51
SAMM50-203ENST00000474323 NCOA3Q9Y6Q9 1424 aa18.26■□□□□ 0.51
SAMM50-203ENST00000474323 MYOM1P52179 1685 aa18.25■□□□□ 0.51
SAMM50-203ENST00000474323 CCDC173Q0VFZ6 552 aa18.24■□□□□ 0.51
SAMM50-203ENST00000474323 GAS2L3Q86XJ1 694 aa18.24■□□□□ 0.51
SAMM50-203ENST00000474323 CIZ1Q9ULV3 898 aaPredicted RBP18.24■□□□□ 0.51
SAMM50-203ENST00000474323 ARHGEF28Q8N1W1 1705 aaKnown RBP18.24■□□□□ 0.51
SAMM50-203ENST00000474323 SBNO2Q9Y2G9 1366 aa18.24■□□□□ 0.51
SAMM50-203ENST00000474323 RARSP54136 660 aaKnown RBP18.24■□□□□ 0.51
SAMM50-203ENST00000474323 WWC1Q8IX03 1113 aa18.24■□□□□ 0.51
SAMM50-203ENST00000474323 GBP4Q96PP9 640 aa18.24■□□□□ 0.51
SAMM50-203ENST00000474323 SAFB2Q14151 953 aaKnown RBP eCLIP18.23■□□□□ 0.51
SAMM50-203ENST00000474323 PPP1R9BQ96SB3 815 aa18.23■□□□□ 0.51
SAMM50-203ENST00000474323 OFD1O75665 1012 aa18.23■□□□□ 0.51
SAMM50-203ENST00000474323 FER1L4A9Z1Z3 1794 aa18.22■□□□□ 0.51
SAMM50-203ENST00000474323 ALKQ9UM73 1620 aa18.22■□□□□ 0.51
SAMM50-203ENST00000474323 ZSCAN30Q86W11 494 aa18.22■□□□□ 0.51
SAMM50-203ENST00000474323 MAP7D2Q96T17 732 aa18.22■□□□□ 0.51
SAMM50-203ENST00000474323 MFAP1P55081 439 aaKnown RBP18.22■□□□□ 0.51
SAMM50-203ENST00000474323 SNX21Q969T3 373 aa18.22■□□□□ 0.51
SAMM50-203ENST00000474323 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.2■□□□□ 0.5
SAMM50-203ENST00000474323 TNPO1Q92973 898 aaKnown RBP18.2■□□□□ 0.5
SAMM50-203ENST00000474323 C3P01024 1663 aa18.2■□□□□ 0.5
SAMM50-203ENST00000474323 SMC5Q8IY18 1101 aa18.2■□□□□ 0.5
SAMM50-203ENST00000474323 CHMP4AQ9BY43 222 aa18.2■□□□□ 0.5
SAMM50-203ENST00000474323 RLBP1P12271 317 aa18.19■□□□□ 0.5
SAMM50-203ENST00000474323 YTHDC2Q9H6S0 1430 aaKnown RBP18.19■□□□□ 0.5
SAMM50-203ENST00000474323 UBR1Q8IWV7 1749 aa18.19■□□□□ 0.5
SAMM50-203ENST00000474323 RAB3GAP1Q15042 981 aa18.18■□□□□ 0.5
SAMM50-203ENST00000474323 ANP32BQ92688 251 aaKnown RBP18.18■□□□□ 0.5
SAMM50-203ENST00000474323 PRDM4Q9UKN5 801 aa18.18■□□□□ 0.5
SAMM50-203ENST00000474323 HAP1P54257 671 aaPredicted RBP18.17■□□□□ 0.5
SAMM50-203ENST00000474323 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.17■□□□□ 0.5
SAMM50-203ENST00000474323 PTPRMP28827 1452 aa18.16■□□□□ 0.5
SAMM50-203ENST00000474323 RBM25P49756 843 aaKnown RBP18.16■□□□□ 0.5
SAMM50-203ENST00000474323 MSNP26038 577 aaKnown RBP18.16■□□□□ 0.5
SAMM50-203ENST00000474323 NASPP49321 788 aaPredicted RBP18.16■□□□□ 0.5
SAMM50-203ENST00000474323 PRAM1Q96QH2 718 aa18.16■□□□□ 0.5
SAMM50-203ENST00000474323 IBTKQ9P2D0 1353 aaPredicted RBP18.15■□□□□ 0.5
SAMM50-203ENST00000474323 RIPK4P57078 832 aa18.15■□□□□ 0.5
SAMM50-203ENST00000474323 TMEM2Q9UHN6 1383 aa18.14■□□□□ 0.5
SAMM50-203ENST00000474323 TULP4Q9NRJ4 1543 aa18.14■□□□□ 0.49
SAMM50-203ENST00000474323 MVPQ14764 893 aaKnown RBP18.14■□□□□ 0.49
SAMM50-203ENST00000474323 HS1BP3Q53T59 392 aa18.14■□□□□ 0.49
SAMM50-203ENST00000474323 SETD1AO15047 1707 aaKnown RBP18.14■□□□□ 0.49
SAMM50-203ENST00000474323 NRXN3Q9Y4C0 1643 aa18.14■□□□□ 0.49
SAMM50-203ENST00000474323 EVC2Q86UK5 1308 aa18.14■□□□□ 0.49
SAMM50-203ENST00000474323 FBXO3Q9UK99 471 aa18.13■□□□□ 0.49
SAMM50-203ENST00000474323 MINK1Q8N4C8 1332 aaPredicted RBP18.13■□□□□ 0.49
SAMM50-203ENST00000474323 POLR3AO14802 1390 aaPredicted RBP18.13■□□□□ 0.49
SAMM50-203ENST00000474323 HDGFP51858 240 aaKnown RBP18.13■□□□□ 0.49
SAMM50-203ENST00000474323 WDR63Q8IWG1 891 aa18.13■□□□□ 0.49
SAMM50-203ENST00000474323 SLC12A5Q9H2X9 1139 aa18.13■□□□□ 0.49
SAMM50-203ENST00000474323 CABP2Q9NPB3 220 aa18.12■□□□□ 0.49
SAMM50-203ENST00000474323 TNNQ9UQP3 1299 aa18.12■□□□□ 0.49
SAMM50-203ENST00000474323 CARD14Q9BXL6 1004 aa18.12■□□□□ 0.49
SAMM50-203ENST00000474323 HDAC1Q13547 482 aaPredicted RBP18.11■□□□□ 0.49
SAMM50-203ENST00000474323 PHF23Q9BUL5 403 aaPredicted RBP18.11■□□□□ 0.49
SAMM50-203ENST00000474323 HSP90AB1P08238 724 aaKnown RBP18.11■□□□□ 0.49
SAMM50-203ENST00000474323 MTERF4Q7Z6M4 381 aaKnown RBP18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms