RNA–Protein interactions for RNA: ENST00000474258.1

SEMA4D-216, Transcript of semaphorin 4D, humanhuman

TSL 4

Gene SEMA4D, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-216ENST00000474258 CRYBG1Q9Y4K1 1723 aa16■□□□□ 0.15
SEMA4D-216ENST00000474258 NBPF1Q3BBV0 1214 aa16■□□□□ 0.15
SEMA4D-216ENST00000474258 ONECUT3O60422 494 aaPredicted RBP15.99■□□□□ 0.15
SEMA4D-216ENST00000474258 TOPAZ1Q8N9V7 1692 aa15.99■□□□□ 0.15
SEMA4D-216ENST00000474258 SEPT12Q8IYM1 358 aa15.98■□□□□ 0.15
SEMA4D-216ENST00000474258 BTG4Q9NY30 223 aa15.98■□□□□ 0.15
SEMA4D-216ENST00000474258 CCDC61Q9Y6R9 512 aa15.98■□□□□ 0.15
SEMA4D-216ENST00000474258 EP400Q96L91 3159 aa15.98■□□□□ 0.15
SEMA4D-216ENST00000474258 ACEP12821 1306 aa15.95■□□□□ 0.14
SEMA4D-216ENST00000474258 PLEKHG3A1L390 1219 aa15.95■□□□□ 0.14
SEMA4D-216ENST00000474258 NBPF8Q3BBV2 869 aa15.95■□□□□ 0.14
SEMA4D-216ENST00000474258 POLR3AO14802 1390 aaPredicted RBP15.95■□□□□ 0.14
SEMA4D-216ENST00000474258 QRICH2Q9H0J4 1663 aa15.95■□□□□ 0.14
SEMA4D-216ENST00000474258 CENPJQ9HC77 1338 aaPredicted RBP15.94■□□□□ 0.14
SEMA4D-216ENST00000474258 BLMP54132 1417 aaPredicted RBP15.94■□□□□ 0.14
SEMA4D-216ENST00000474258 KRT27Q7Z3Y8 459 aa15.94■□□□□ 0.14
SEMA4D-216ENST00000474258 L3MBTL2Q969R5 705 aa15.94■□□□□ 0.14
SEMA4D-216ENST00000474258 PHRF1Q9P1Y6 1649 aaKnown RBP15.94■□□□□ 0.14
SEMA4D-216ENST00000474258 PRDM11Q9NQV5 511 aa15.93■□□□□ 0.14
SEMA4D-216ENST00000474258 ZRANB1Q9UGI0 708 aa15.93■□□□□ 0.14
SEMA4D-216ENST00000474258 A0A0G2JS52 829 aa15.92■□□□□ 0.14
SEMA4D-216ENST00000474258 SRPK2P78362 688 aaKnown RBP15.92■□□□□ 0.14
SEMA4D-216ENST00000474258 MYT1Q01538 1121 aa15.92■□□□□ 0.14
SEMA4D-216ENST00000474258 SF3B2Q13435 895 aaKnown RBP15.92■□□□□ 0.14
SEMA4D-216ENST00000474258 FAM98CQ17RN3 349 aaKnown RBP15.91■□□□□ 0.14
SEMA4D-216ENST00000474258 NUTM2GQ5VZR2 741 aa15.91■□□□□ 0.14
SEMA4D-216ENST00000474258 SIN3AQ96ST3 1273 aa15.91■□□□□ 0.14
SEMA4D-216ENST00000474258 PCGF6Q9BYE7 350 aa15.91■□□□□ 0.14
SEMA4D-216ENST00000474258 SPATA31A5Q5VU36 1347 aa15.91■□□□□ 0.14
SEMA4D-216ENST00000474258 SPATA31A7Q8IWB4 1347 aa15.91■□□□□ 0.14
SEMA4D-216ENST00000474258 TRPM1Q7Z4N2 1603 aa15.9■□□□□ 0.14
SEMA4D-216ENST00000474258 ABTB2Q8N961 1025 aa15.9■□□□□ 0.14
SEMA4D-216ENST00000474258 CABP2Q9NPB3 220 aa15.9■□□□□ 0.14
SEMA4D-216ENST00000474258 KIAA0232Q92628 1395 aa15.89■□□□□ 0.13
SEMA4D-216ENST00000474258 PPIP5K1Q6PFW1 1433 aa15.89■□□□□ 0.13
SEMA4D-216ENST00000474258 ZC3H6P61129 1189 aaKnown RBP15.89■□□□□ 0.13
SEMA4D-216ENST00000474258 NEUROD1Q13562 356 aa15.89■□□□□ 0.13
SEMA4D-216ENST00000474258 CHRNA2Q15822 529 aa15.88■□□□□ 0.13
SEMA4D-216ENST00000474258 NLRP13Q86W25 1043 aa15.87■□□□□ 0.13
SEMA4D-216ENST00000474258 BRD4O60885 1362 aaPredicted RBP15.87■□□□□ 0.13
SEMA4D-216ENST00000474258 DEFB132Q7Z7B7 95 aa15.86■□□□□ 0.13
SEMA4D-216ENST00000474258 THSD7AQ9UPZ6 1657 aa15.86■□□□□ 0.13
SEMA4D-216ENST00000474258 NRKQ7Z2Y5 1582 aa15.85■□□□□ 0.13
SEMA4D-216ENST00000474258 EVA1CP58658 441 aa15.85■□□□□ 0.13
SEMA4D-216ENST00000474258 STRN4Q9NRL3 753 aa15.85■□□□□ 0.13
SEMA4D-216ENST00000474258 CABP1Q9NZU7 370 aa15.85■□□□□ 0.13
SEMA4D-216ENST00000474258 SPATA31A1Q5TZJ5 1347 aa15.85■□□□□ 0.13
SEMA4D-216ENST00000474258 EVC2Q86UK5 1308 aa15.85■□□□□ 0.13
SEMA4D-216ENST00000474258 RGPD1P0DJD0 1748 aa15.85■□□□□ 0.13
SEMA4D-216ENST00000474258 USP19O94966 1318 aa15.84■□□□□ 0.13
SEMA4D-216ENST00000474258 ROCK2O75116 1388 aaKnown RBP15.84■□□□□ 0.13
SEMA4D-216ENST00000474258 BAG6P46379 1132 aa15.83■□□□□ 0.12
SEMA4D-216ENST00000474258 CPDO75976 1380 aa15.83■□□□□ 0.12
SEMA4D-216ENST00000474258 GCP02774 474 aa15.82■□□□□ 0.12
SEMA4D-216ENST00000474258 LMO7Q8WWI1 1683 aa15.82■□□□□ 0.12
SEMA4D-216ENST00000474258 CAMTA1Q9Y6Y1 1673 aa15.82■□□□□ 0.12
SEMA4D-216ENST00000474258 USP6P35125 1406 aa15.81■□□□□ 0.12
SEMA4D-216ENST00000474258 AKAP12Q02952 1782 aa15.81■□□□□ 0.12
SEMA4D-216ENST00000474258 FAM182BQ5T319 152 aa15.81■□□□□ 0.12
SEMA4D-216ENST00000474258 SSH2Q76I76 1423 aa15.81■□□□□ 0.12
SEMA4D-216ENST00000474258 USP35Q9P2H5 1018 aa15.81■□□□□ 0.12
SEMA4D-216ENST00000474258 NLRP6P59044 892 aa15.8■□□□□ 0.12
SEMA4D-216ENST00000474258 LARP1Q6PKG0 1096 aaKnown RBP15.79■□□□□ 0.12
SEMA4D-216ENST00000474258 BARGINQ6ZT62 677 aa15.79■□□□□ 0.12
SEMA4D-216ENST00000474258 ZNF692Q9BU19 519 aaPredicted RBP15.79■□□□□ 0.12
SEMA4D-216ENST00000474258 TNS1Q9HBL0 1735 aaKnown RBP15.78■□□□□ 0.12
SEMA4D-216ENST00000474258 FAM196AQ6ZSG2 479 aa15.78■□□□□ 0.12
SEMA4D-216ENST00000474258 PIK3C2AO00443 1686 aa15.77■□□□□ 0.12
SEMA4D-216ENST00000474258 TCP11L2Q8N4U5 519 aa15.77■□□□□ 0.12
SEMA4D-216ENST00000474258 SLIT3O75094 1523 aa15.77■□□□□ 0.11
SEMA4D-216ENST00000474258 THRAP3Q9Y2W1 955 aaKnown RBP15.76■□□□□ 0.11
SEMA4D-216ENST00000474258 RGPD5Q99666 1765 aa15.76■□□□□ 0.11
SEMA4D-216ENST00000474258 COL18A1P39060 1754 aa15.75■□□□□ 0.11
SEMA4D-216ENST00000474258 ZBTB7CA1YPR0 619 aa15.75■□□□□ 0.11
SEMA4D-216ENST00000474258 EN1Q05925 392 aaPredicted RBP15.75■□□□□ 0.11
SEMA4D-216ENST00000474258 PDE3BQ13370 1112 aa15.75■□□□□ 0.11
SEMA4D-216ENST00000474258 COL5A2P05997 1499 aaPredicted RBP15.75■□□□□ 0.11
SEMA4D-216ENST00000474258 TTC21BQ7Z4L5 1316 aa15.74■□□□□ 0.11
SEMA4D-216ENST00000474258 CARD11Q9BXL7 1154 aa15.74■□□□□ 0.11
SEMA4D-216ENST00000474258 DISP2A7MBM2 1401 aa15.74■□□□□ 0.11
SEMA4D-216ENST00000474258 PARP4Q9UKK3 1724 aaKnown RBP15.74■□□□□ 0.11
SEMA4D-216ENST00000474258 AATKQ6ZMQ8 1374 aa15.74■□□□□ 0.11
SEMA4D-216ENST00000474258 TTC21AQ8NDW8 1320 aa15.73■□□□□ 0.11
SEMA4D-216ENST00000474258 TRIM37O94972 964 aa15.73■□□□□ 0.11
SEMA4D-216ENST00000474258 TONSLQ96HA7 1378 aa15.73■□□□□ 0.11
SEMA4D-216ENST00000474258 SBNO2Q9Y2G9 1366 aa15.73■□□□□ 0.11
SEMA4D-216ENST00000474258 MON2Q7Z3U7 1717 aa15.72■□□□□ 0.11
SEMA4D-216ENST00000474258 CRB1P82279 1406 aa15.72■□□□□ 0.11
SEMA4D-216ENST00000474258 CPSF1Q10570 1443 aaKnown RBP15.72■□□□□ 0.11
SEMA4D-216ENST00000474258 KCNH5Q8NCM2 988 aa15.72■□□□□ 0.11
SEMA4D-216ENST00000474258 KTN1Q86UP2 1357 aaKnown RBP15.71■□□□□ 0.11
SEMA4D-216ENST00000474258 SRCAPQ6ZRS2 3230 aa15.7■□□□□ 0.1
SEMA4D-216ENST00000474258 EZH2Q15910 746 aaKnown RBP15.7■□□□□ 0.1
SEMA4D-216ENST00000474258 TOM1L2Q6ZVM7 507 aa15.7■□□□□ 0.1
SEMA4D-216ENST00000474258 SBF2Q86WG5 1849 aa15.7■□□□□ 0.1
SEMA4D-216ENST00000474258 LRP5O75197 1615 aa15.69■□□□□ 0.1
SEMA4D-216ENST00000474258 WNK3Q9BYP7 1800 aa15.69■□□□□ 0.1
SEMA4D-216ENST00000474258 PSDA5PKW4 1024 aaPredicted RBP15.69■□□□□ 0.1
SEMA4D-216ENST00000474258 C11orf95C9JLR9 678 aaPredicted RBP15.69■□□□□ 0.1
SEMA4D-216ENST00000474258 APBA3O96018 575 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms