RNA–Protein interactions for RNA: ENST00000474171.1

RPL13A-205, Transcript of ribosomal protein L13a, humanhuman

TSL 2

Gene RPL13A, Length 521 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13A-205ENST00000474171 NGDNQ8NEJ9 315 aaKnown RBP16.22■□□□□ 0.19
RPL13A-205ENST00000474171 FAM83GA6ND36 823 aa16.21■□□□□ 0.19
RPL13A-205ENST00000474171 COL14A1Q05707 1796 aaKnown RBP16.21■□□□□ 0.18
RPL13A-205ENST00000474171 PAK3O75914 559 aaPredicted RBP16.19■□□□□ 0.18
RPL13A-205ENST00000474171 ACEP12821 1306 aa16.19■□□□□ 0.18
RPL13A-205ENST00000474171 CENPJQ9HC77 1338 aaPredicted RBP16.19■□□□□ 0.18
RPL13A-205ENST00000474171 POLR3AO14802 1390 aaPredicted RBP16.18■□□□□ 0.18
RPL13A-205ENST00000474171 ATAD2Q6PL18 1390 aa16.17■□□□□ 0.18
RPL13A-205ENST00000474171 CABP2Q9NPB3 220 aa16.17■□□□□ 0.18
RPL13A-205ENST00000474171 VPS72Q15906 364 aa16.16■□□□□ 0.18
RPL13A-205ENST00000474171 NBPF8Q3BBV2 869 aa16.16■□□□□ 0.18
RPL13A-205ENST00000474171 NUTM2GQ5VZR2 741 aa16.16■□□□□ 0.18
RPL13A-205ENST00000474171 CCDC61Q9Y6R9 512 aa16.16■□□□□ 0.18
RPL13A-205ENST00000474171 EP400Q96L91 3159 aa16.15■□□□□ 0.18
RPL13A-205ENST00000474171 PLEKHG3A1L390 1219 aa16.15■□□□□ 0.18
RPL13A-205ENST00000474171 PPIP5K1Q6PFW1 1433 aa16.15■□□□□ 0.18
RPL13A-205ENST00000474171 SRPK2P78362 688 aaKnown RBP16.14■□□□□ 0.17
RPL13A-205ENST00000474171 BTG4Q9NY30 223 aa16.14■□□□□ 0.17
RPL13A-205ENST00000474171 NRKQ7Z2Y5 1582 aa16.13■□□□□ 0.17
RPL13A-205ENST00000474171 CCDC9Q9Y3X0 531 aaKnown RBP16.13■□□□□ 0.17
RPL13A-205ENST00000474171 SEPT12Q8IYM1 358 aa16.12■□□□□ 0.17
RPL13A-205ENST00000474171 ROCK2O75116 1388 aaKnown RBP16.12■□□□□ 0.17
RPL13A-205ENST00000474171 KIAA0232Q92628 1395 aa16.12■□□□□ 0.17
RPL13A-205ENST00000474171 AKAP12Q02952 1782 aa16.11■□□□□ 0.17
RPL13A-205ENST00000474171 ONECUT3O60422 494 aaPredicted RBP16.1■□□□□ 0.17
RPL13A-205ENST00000474171 CHRNA2Q15822 529 aa16.1■□□□□ 0.17
RPL13A-205ENST00000474171 PRDM11Q9NQV5 511 aa16.1■□□□□ 0.17
RPL13A-205ENST00000474171 PIK3C2AO00443 1686 aa16.09■□□□□ 0.17
RPL13A-205ENST00000474171 LMO7Q8WWI1 1683 aa16.09■□□□□ 0.17
RPL13A-205ENST00000474171 ZC3H6P61129 1189 aaKnown RBP16.09■□□□□ 0.17
RPL13A-205ENST00000474171 CABP1Q9NZU7 370 aa16.09■□□□□ 0.17
RPL13A-205ENST00000474171 THSD7AQ9UPZ6 1657 aa16.08■□□□□ 0.17
RPL13A-205ENST00000474171 FAM98CQ17RN3 349 aaKnown RBP16.08■□□□□ 0.16
RPL13A-205ENST00000474171 ABTB2Q8N961 1025 aa16.08■□□□□ 0.16
RPL13A-205ENST00000474171 USP6P35125 1406 aa16.07■□□□□ 0.16
RPL13A-205ENST00000474171 CAMTA1Q9Y6Y1 1673 aa16.07■□□□□ 0.16
RPL13A-205ENST00000474171 USP19O94966 1318 aa16.06■□□□□ 0.16
RPL13A-205ENST00000474171 SPATA31A5Q5VU36 1347 aa16.06■□□□□ 0.16
RPL13A-205ENST00000474171 SPATA31A7Q8IWB4 1347 aa16.06■□□□□ 0.16
RPL13A-205ENST00000474171 TRIM26Q12899 539 aaPredicted RBP16.06■□□□□ 0.16
RPL13A-205ENST00000474171 SSH2Q76I76 1423 aa16.05■□□□□ 0.16
RPL13A-205ENST00000474171 EVC2Q86UK5 1308 aa16.05■□□□□ 0.16
RPL13A-205ENST00000474171 RGPD5Q99666 1765 aa16.05■□□□□ 0.16
RPL13A-205ENST00000474171 KRT27Q7Z3Y8 459 aa16.04■□□□□ 0.16
RPL13A-205ENST00000474171 STRN4Q9NRL3 753 aa16.04■□□□□ 0.16
RPL13A-205ENST00000474171 MON2Q7Z3U7 1717 aa16.04■□□□□ 0.16
RPL13A-205ENST00000474171 BLMP54132 1417 aaPredicted RBP16.03■□□□□ 0.16
RPL13A-205ENST00000474171 COL18A1P39060 1754 aa16.03■□□□□ 0.16
RPL13A-205ENST00000474171 A0A0G2JS52 829 aa16.03■□□□□ 0.16
RPL13A-205ENST00000474171 MYT1Q01538 1121 aa16.03■□□□□ 0.16
RPL13A-205ENST00000474171 FAM182BQ5T319 152 aa16.03■□□□□ 0.16
RPL13A-205ENST00000474171 SLIT3O75094 1523 aa16.03■□□□□ 0.16
RPL13A-205ENST00000474171 TONSLQ96HA7 1378 aa16.02■□□□□ 0.16
RPL13A-205ENST00000474171 DEFB132Q7Z7B7 95 aa16.02■□□□□ 0.16
RPL13A-205ENST00000474171 CPDO75976 1380 aa16.01■□□□□ 0.15
RPL13A-205ENST00000474171 SPATA31A1Q5TZJ5 1347 aa16.01■□□□□ 0.15
RPL13A-205ENST00000474171 GCP02774 474 aa16.01■□□□□ 0.15
RPL13A-205ENST00000474171 NLRP13Q86W25 1043 aa16.01■□□□□ 0.15
RPL13A-205ENST00000474171 CCDC125Q86Z20 511 aa16.01■□□□□ 0.15
RPL13A-205ENST00000474171 CARD11Q9BXL7 1154 aa16.01■□□□□ 0.15
RPL13A-205ENST00000474171 BRD4O60885 1362 aaPredicted RBP16■□□□□ 0.15
RPL13A-205ENST00000474171 TNS1Q9HBL0 1735 aaKnown RBP16■□□□□ 0.15
RPL13A-205ENST00000474171 RGPD1P0DJD0 1748 aa15.99■□□□□ 0.15
RPL13A-205ENST00000474171 NLRP6P59044 892 aa15.99■□□□□ 0.15
RPL13A-205ENST00000474171 LARP1Q6PKG0 1096 aaKnown RBP15.99■□□□□ 0.15
RPL13A-205ENST00000474171 USP35Q9P2H5 1018 aa15.99■□□□□ 0.15
RPL13A-205ENST00000474171 CPSF1Q10570 1443 aaKnown RBP15.99■□□□□ 0.15
RPL13A-205ENST00000474171 SBNO2Q9Y2G9 1366 aa15.99■□□□□ 0.15
RPL13A-205ENST00000474171 CD163L1Q9NR16 1453 aa15.98■□□□□ 0.15
RPL13A-205ENST00000474171 COL5A2P05997 1499 aaPredicted RBP15.97■□□□□ 0.15
RPL13A-205ENST00000474171 TTC21BQ7Z4L5 1316 aa15.97■□□□□ 0.15
RPL13A-205ENST00000474171 WNK3Q9BYP7 1800 aa15.96■□□□□ 0.15
RPL13A-205ENST00000474171 ZBTB7CA1YPR0 619 aa15.96■□□□□ 0.15
RPL13A-205ENST00000474171 EVA1CP58658 441 aa15.96■□□□□ 0.15
RPL13A-205ENST00000474171 PARP4Q9UKK3 1724 aaKnown RBP15.95■□□□□ 0.14
RPL13A-205ENST00000474171 ZRANB1Q9UGI0 708 aa15.95■□□□□ 0.14
RPL13A-205ENST00000474171 KTN1Q86UP2 1357 aaKnown RBP15.95■□□□□ 0.14
RPL13A-205ENST00000474171 USP54Q70EL1 1684 aa15.95■□□□□ 0.14
RPL13A-205ENST00000474171 NFAT5O94916 1531 aa15.94■□□□□ 0.14
RPL13A-205ENST00000474171 ZNF692Q9BU19 519 aaPredicted RBP15.94■□□□□ 0.14
RPL13A-205ENST00000474171 LTN1O94822 1766 aa15.93■□□□□ 0.14
RPL13A-205ENST00000474171 AATKQ6ZMQ8 1374 aa15.93■□□□□ 0.14
RPL13A-205ENST00000474171 AXIN2Q9Y2T1 843 aa15.93■□□□□ 0.14
RPL13A-205ENST00000474171 SOX12O15370 315 aa15.92■□□□□ 0.14
RPL13A-205ENST00000474171 SF3B2Q13435 895 aaKnown RBP15.92■□□□□ 0.14
RPL13A-205ENST00000474171 BARGINQ6ZT62 677 aa15.92■□□□□ 0.14
RPL13A-205ENST00000474171 SLC12A5Q9H2X9 1139 aa15.92■□□□□ 0.14
RPL13A-205ENST00000474171 TTC21AQ8NDW8 1320 aa15.92■□□□□ 0.14
RPL13A-205ENST00000474171 LRRC37A3O60309 1634 aa15.91■□□□□ 0.14
RPL13A-205ENST00000474171 TCP11L2Q8N4U5 519 aa15.91■□□□□ 0.14
RPL13A-205ENST00000474171 TESK2Q96S53 571 aa15.91■□□□□ 0.14
RPL13A-205ENST00000474171 CRB1P82279 1406 aa15.91■□□□□ 0.14
RPL13A-205ENST00000474171 SBF2Q86WG5 1849 aa15.91■□□□□ 0.14
RPL13A-205ENST00000474171 ST20-MTHFSA0A0A6YYL1 179 aa15.9■□□□□ 0.14
RPL13A-205ENST00000474171 ARHGEF25Q86VW2 580 aa15.9■□□□□ 0.14
RPL13A-205ENST00000474171 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.9■□□□□ 0.14
RPL13A-205ENST00000474171 TMC1Q8TDI8 760 aa15.9■□□□□ 0.14
RPL13A-205ENST00000474171 PEAK1Q9H792 1746 aa15.89■□□□□ 0.13
RPL13A-205ENST00000474171 EN1Q05925 392 aaPredicted RBP15.89■□□□□ 0.13
RPL13A-205ENST00000474171 NME9Q86XW9 330 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms