RNA–Protein interactions for RNA: ENST00000473911.1

CLIC3-201, Transcript of chloride intracellular channel 3, humanhuman

TSL 5

Gene CLIC3, Length 732 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3-201ENST00000473911 NGDNQ8NEJ9 315 aaKnown RBP22.43■■□□□ 1.18
CLIC3-201ENST00000473911 ALS2Q96Q42 1657 aa22.42■■□□□ 1.18
CLIC3-201ENST00000473911 ARHGEF28Q8N1W1 1705 aaKnown RBP22.42■■□□□ 1.18
CLIC3-201ENST00000473911 KIAA1210Q9ULL0 1709 aa22.41■■□□□ 1.18
CLIC3-201ENST00000473911 NUDT16Q96DE0 195 aaKnown RBP22.41■■□□□ 1.18
CLIC3-201ENST00000473911 KRT27Q7Z3Y8 459 aa22.4■■□□□ 1.18
CLIC3-201ENST00000473911 CDK19Q9BWU1 502 aa22.4■■□□□ 1.18
CLIC3-201ENST00000473911 BTG4Q9NY30 223 aa22.39■■□□□ 1.17
CLIC3-201ENST00000473911 FAM98CQ17RN3 349 aaKnown RBP22.38■■□□□ 1.17
CLIC3-201ENST00000473911 CRYBG1Q9Y4K1 1723 aa22.37■■□□□ 1.17
CLIC3-201ENST00000473911 PAK3O75914 559 aaPredicted RBP22.37■■□□□ 1.17
CLIC3-201ENST00000473911 CENPJQ9HC77 1338 aaPredicted RBP22.36■■□□□ 1.17
CLIC3-201ENST00000473911 ATP7BP35670 1465 aa22.36■■□□□ 1.17
CLIC3-201ENST00000473911 FAM182BQ5T319 152 aa22.36■■□□□ 1.17
CLIC3-201ENST00000473911 A0A0G2JS52 829 aa22.34■■□□□ 1.17
CLIC3-201ENST00000473911 MYT1Q01538 1121 aa22.34■■□□□ 1.17
CLIC3-201ENST00000473911 COL14A1Q05707 1796 aaKnown RBP22.34■■□□□ 1.17
CLIC3-201ENST00000473911 SRPK2P78362 688 aaKnown RBP22.32■■□□□ 1.16
CLIC3-201ENST00000473911 SF3B2Q13435 895 aaKnown RBP22.32■■□□□ 1.16
CLIC3-201ENST00000473911 CCDC61Q9Y6R9 512 aa22.32■■□□□ 1.16
CLIC3-201ENST00000473911 TRIM26Q12899 539 aaPredicted RBP22.31■■□□□ 1.16
CLIC3-201ENST00000473911 ROCK2O75116 1388 aaKnown RBP22.3■■□□□ 1.16
CLIC3-201ENST00000473911 SPATA31A5Q5VU36 1347 aa22.3■■□□□ 1.16
CLIC3-201ENST00000473911 SPATA31A7Q8IWB4 1347 aa22.3■■□□□ 1.16
CLIC3-201ENST00000473911 PSDA5PKW4 1024 aaPredicted RBP22.29■■□□□ 1.16
CLIC3-201ENST00000473911 ACEP12821 1306 aa22.29■■□□□ 1.16
CLIC3-201ENST00000473911 ITSN1Q15811 1721 aa22.28■■□□□ 1.16
CLIC3-201ENST00000473911 CHRNA2Q15822 529 aa22.28■■□□□ 1.16
CLIC3-201ENST00000473911 NUTM2GQ5VZR2 741 aa22.28■■□□□ 1.16
CLIC3-201ENST00000473911 PLEKHG3A1L390 1219 aa22.27■■□□□ 1.16
CLIC3-201ENST00000473911 NBPF8Q3BBV2 869 aa22.27■■□□□ 1.16
CLIC3-201ENST00000473911 CABP2Q9NPB3 220 aa22.27■■□□□ 1.16
CLIC3-201ENST00000473911 THSD7AQ9UPZ6 1657 aa22.26■■□□□ 1.15
CLIC3-201ENST00000473911 POLR3AO14802 1390 aaPredicted RBP22.26■■□□□ 1.15
CLIC3-201ENST00000473911 EN1Q05925 392 aaPredicted RBP22.26■■□□□ 1.15
CLIC3-201ENST00000473911 PRDM11Q9NQV5 511 aa22.26■■□□□ 1.15
CLIC3-201ENST00000473911 KIAA0232Q92628 1395 aa22.25■■□□□ 1.15
CLIC3-201ENST00000473911 TRPM1Q7Z4N2 1603 aa22.24■■□□□ 1.15
CLIC3-201ENST00000473911 PHRF1Q9P1Y6 1649 aaKnown RBP22.24■■□□□ 1.15
CLIC3-201ENST00000473911 PPIP5K1Q6PFW1 1433 aa22.23■■□□□ 1.15
CLIC3-201ENST00000473911 BAG6P46379 1132 aa22.23■■□□□ 1.15
CLIC3-201ENST00000473911 ZC3H6P61129 1189 aaKnown RBP22.23■■□□□ 1.15
CLIC3-201ENST00000473911 TONSLQ96HA7 1378 aa22.23■■□□□ 1.15
CLIC3-201ENST00000473911 TOPAZ1Q8N9V7 1692 aa22.22■■□□□ 1.15
CLIC3-201ENST00000473911 EVC2Q86UK5 1308 aa22.22■■□□□ 1.15
CLIC3-201ENST00000473911 QRICH2Q9H0J4 1663 aa22.21■■□□□ 1.15
CLIC3-201ENST00000473911 STRN4Q9NRL3 753 aa22.21■■□□□ 1.15
CLIC3-201ENST00000473911 SPATA31A1Q5TZJ5 1347 aa22.21■■□□□ 1.15
CLIC3-201ENST00000473911 LRP5O75197 1615 aa22.2■■□□□ 1.15
CLIC3-201ENST00000473911 RGPD1P0DJD0 1748 aa22.2■■□□□ 1.14
CLIC3-201ENST00000473911 TNS1Q9HBL0 1735 aaKnown RBP22.2■■□□□ 1.14
CLIC3-201ENST00000473911 ABTB2Q8N961 1025 aa22.2■■□□□ 1.14
CLIC3-201ENST00000473911 CABP1Q9NZU7 370 aa22.19■■□□□ 1.14
CLIC3-201ENST00000473911 EZH2Q15910 746 aaKnown RBP22.17■■□□□ 1.14
CLIC3-201ENST00000473911 CARD11Q9BXL7 1154 aa22.17■■□□□ 1.14
CLIC3-201ENST00000473911 USP35Q9P2H5 1018 aa22.17■■□□□ 1.14
CLIC3-201ENST00000473911 TRIM37O94972 964 aa22.15■■□□□ 1.14
CLIC3-201ENST00000473911 CAMTA1Q9Y6Y1 1673 aa22.14■■□□□ 1.14
CLIC3-201ENST00000473911 NRKQ7Z2Y5 1582 aa22.14■■□□□ 1.13
CLIC3-201ENST00000473911 R3HDM1Q15032 1099 aaKnown RBP22.14■■□□□ 1.13
CLIC3-201ENST00000473911 BRD4O60885 1362 aaPredicted RBP22.13■■□□□ 1.13
CLIC3-201ENST00000473911 LARP1Q6PKG0 1096 aaKnown RBP22.13■■□□□ 1.13
CLIC3-201ENST00000473911 NLRP13Q86W25 1043 aa22.13■■□□□ 1.13
CLIC3-201ENST00000473911 DISP2A7MBM2 1401 aa22.13■■□□□ 1.13
CLIC3-201ENST00000473911 CAMKK2Q96RR4 588 aa22.12■■□□□ 1.13
CLIC3-201ENST00000473911 SSH2Q76I76 1423 aa22.12■■□□□ 1.13
CLIC3-201ENST00000473911 LMO7Q8WWI1 1683 aa22.11■■□□□ 1.13
CLIC3-201ENST00000473911 USP6P35125 1406 aa22.11■■□□□ 1.13
CLIC3-201ENST00000473911 USP19O94966 1318 aa22.09■■□□□ 1.13
CLIC3-201ENST00000473911 EVA1CP58658 441 aa22.09■■□□□ 1.13
CLIC3-201ENST00000473911 NLRP6P59044 892 aa22.08■■□□□ 1.13
CLIC3-201ENST00000473911 FAM196AQ6ZSG2 479 aa22.08■■□□□ 1.13
CLIC3-201ENST00000473911 GCP02774 474 aa22.07■■□□□ 1.12
CLIC3-201ENST00000473911 BARGINQ6ZT62 677 aa22.07■■□□□ 1.12
CLIC3-201ENST00000473911 ZNF692Q9BU19 519 aaPredicted RBP22.07■■□□□ 1.12
CLIC3-201ENST00000473911 APBA3O96018 575 aa22.06■■□□□ 1.12
CLIC3-201ENST00000473911 CPDO75976 1380 aa22.06■■□□□ 1.12
CLIC3-201ENST00000473911 SBNO2Q9Y2G9 1366 aa22.05■■□□□ 1.12
CLIC3-201ENST00000473911 ZBTB7CA1YPR0 619 aa22.05■■□□□ 1.12
CLIC3-201ENST00000473911 TCP11L2Q8N4U5 519 aa22.04■■□□□ 1.12
CLIC3-201ENST00000473911 RREB1Q92766 1687 aa22.02■■□□□ 1.12
CLIC3-201ENST00000473911 PDE3BQ13370 1112 aa22.02■■□□□ 1.12
CLIC3-201ENST00000473911 TTC21BQ7Z4L5 1316 aa22.02■■□□□ 1.12
CLIC3-201ENST00000473911 COL5A2P05997 1499 aaPredicted RBP22.02■■□□□ 1.12
CLIC3-201ENST00000473911 KTN1Q86UP2 1357 aaKnown RBP22■■□□□ 1.11
CLIC3-201ENST00000473911 NUP188Q5SRE5 1749 aa22■■□□□ 1.11
CLIC3-201ENST00000473911 TMC1Q8TDI8 760 aa22■■□□□ 1.11
CLIC3-201ENST00000473911 TTC21AQ8NDW8 1320 aa22■■□□□ 1.11
CLIC3-201ENST00000473911 CPSF1Q10570 1443 aaKnown RBP21.98■■□□□ 1.11
CLIC3-201ENST00000473911 PARP4Q9UKK3 1724 aaKnown RBP21.97■■□□□ 1.11
CLIC3-201ENST00000473911 SLIT3O75094 1523 aa21.96■■□□□ 1.11
CLIC3-201ENST00000473911 PIK3C2AO00443 1686 aa21.96■■□□□ 1.11
CLIC3-201ENST00000473911 SOX12O15370 315 aa21.96■■□□□ 1.11
CLIC3-201ENST00000473911 PTF1AQ7RTS3 328 aa21.96■■□□□ 1.11
CLIC3-201ENST00000473911 HDGFL2Q7Z4V5 671 aaPredicted RBP21.96■■□□□ 1.11
CLIC3-201ENST00000473911 PCGF6Q9BYE7 350 aa21.96■■□□□ 1.11
CLIC3-201ENST00000473911 AXIN2Q9Y2T1 843 aa21.96■■□□□ 1.11
CLIC3-201ENST00000473911 COL18A1P39060 1754 aa21.96■■□□□ 1.11
CLIC3-201ENST00000473911 PEAK1Q9H792 1746 aa21.95■■□□□ 1.1
CLIC3-201ENST00000473911 ST20-MTHFSA0A0A6YYL1 179 aa21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms