RNA–Protein interactions for RNA: ENST00000473728.1

GCC1-202, Transcript of GRIP and coiled-coil domain containing 1, humanhuman

TSL 3

Gene GCC1, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCC1-202ENST00000473728 CDK12Q9NYV4 1490 aaPredicted RBP16.52■□□□□ 0.23
GCC1-202ENST00000473728 SRPK2P78362 688 aaKnown RBP16.51■□□□□ 0.23
GCC1-202ENST00000473728 TRPC5Q9UL62 973 aaPredicted RBP16.51■□□□□ 0.23
GCC1-202ENST00000473728 RGS12O14924 1447 aa16.51■□□□□ 0.23
GCC1-202ENST00000473728 CRYBG1Q9Y4K1 1723 aa16.5■□□□□ 0.23
GCC1-202ENST00000473728 PAK3O75914 559 aaPredicted RBP16.5■□□□□ 0.23
GCC1-202ENST00000473728 PPIP5K1Q6PFW1 1433 aa16.49■□□□□ 0.23
GCC1-202ENST00000473728 UNC5CLQ8IV45 518 aa16.49■□□□□ 0.23
GCC1-202ENST00000473728 PCGF6Q9BYE7 350 aa16.49■□□□□ 0.23
GCC1-202ENST00000473728 CABP1Q9NZU7 370 aa16.49■□□□□ 0.23
GCC1-202ENST00000473728 RALGAPBQ86X10 1494 aa16.48■□□□□ 0.23
GCC1-202ENST00000473728 CARD11Q9BXL7 1154 aa16.48■□□□□ 0.23
GCC1-202ENST00000473728 NUTM2GQ5VZR2 741 aa16.47■□□□□ 0.23
GCC1-202ENST00000473728 UPF1Q92900 1129 aaKnown RBP eCLIP16.47■□□□□ 0.23
GCC1-202ENST00000473728 GJD4Q96KN9 370 aaPredicted RBP16.47■□□□□ 0.23
GCC1-202ENST00000473728 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.47■□□□□ 0.23
GCC1-202ENST00000473728 EVC2Q86UK5 1308 aa16.46■□□□□ 0.23
GCC1-202ENST00000473728 HAP1P54257 671 aaPredicted RBP16.46■□□□□ 0.23
GCC1-202ENST00000473728 GLI3P10071 1580 aa16.45■□□□□ 0.22
GCC1-202ENST00000473728 PLCH1Q4KWH8 1693 aa16.45■□□□□ 0.22
GCC1-202ENST00000473728 SSH2Q76I76 1423 aa16.44■□□□□ 0.22
GCC1-202ENST00000473728 NWD2Q9ULI1 1742 aa16.42■□□□□ 0.22
GCC1-202ENST00000473728 SBNO2Q9Y2G9 1366 aa16.42■□□□□ 0.22
GCC1-202ENST00000473728 VPS72Q15906 364 aa16.42■□□□□ 0.22
GCC1-202ENST00000473728 ABTB2Q8N961 1025 aa16.42■□□□□ 0.22
GCC1-202ENST00000473728 BTG4Q9NY30 223 aa16.42■□□□□ 0.22
GCC1-202ENST00000473728 PHRF1Q9P1Y6 1649 aaKnown RBP16.41■□□□□ 0.22
GCC1-202ENST00000473728 TESK2Q96S53 571 aa16.41■□□□□ 0.22
GCC1-202ENST00000473728 USP6P35125 1406 aa16.41■□□□□ 0.22
GCC1-202ENST00000473728 NRAPQ86VF7 1730 aa16.41■□□□□ 0.22
GCC1-202ENST00000473728 ONECUT3O60422 494 aaPredicted RBP16.4■□□□□ 0.22
GCC1-202ENST00000473728 ZC3H6P61129 1189 aaKnown RBP16.4■□□□□ 0.22
GCC1-202ENST00000473728 COL14A1Q05707 1796 aaKnown RBP16.4■□□□□ 0.22
GCC1-202ENST00000473728 USP19O94966 1318 aa16.4■□□□□ 0.22
GCC1-202ENST00000473728 KIAA0232Q92628 1395 aa16.39■□□□□ 0.21
GCC1-202ENST00000473728 CPSF1Q10570 1443 aaKnown RBP16.39■□□□□ 0.21
GCC1-202ENST00000473728 ST20-MTHFSA0A0A6YYL1 179 aa16.39■□□□□ 0.21
GCC1-202ENST00000473728 CHRNA2Q15822 529 aa16.39■□□□□ 0.21
GCC1-202ENST00000473728 BRD4O60885 1362 aaPredicted RBP16.38■□□□□ 0.21
GCC1-202ENST00000473728 CD163L1Q9NR16 1453 aa16.37■□□□□ 0.21
GCC1-202ENST00000473728 AKAP12Q02952 1782 aa16.37■□□□□ 0.21
GCC1-202ENST00000473728 NRKQ7Z2Y5 1582 aa16.36■□□□□ 0.21
GCC1-202ENST00000473728 GCP02774 474 aa16.36■□□□□ 0.21
GCC1-202ENST00000473728 NLRP13Q86W25 1043 aa16.36■□□□□ 0.21
GCC1-202ENST00000473728 ZNF692Q9BU19 519 aaPredicted RBP16.36■□□□□ 0.21
GCC1-202ENST00000473728 PRDM11Q9NQV5 511 aa16.36■□□□□ 0.21
GCC1-202ENST00000473728 TTC21BQ7Z4L5 1316 aa16.36■□□□□ 0.21
GCC1-202ENST00000473728 CLSPNQ9HAW4 1339 aa16.36■□□□□ 0.21
GCC1-202ENST00000473728 ATAD2Q6PL18 1390 aa16.36■□□□□ 0.21
GCC1-202ENST00000473728 BRWD3Q6RI45 1802 aa16.35■□□□□ 0.21
GCC1-202ENST00000473728 PIK3C2AO00443 1686 aa16.35■□□□□ 0.21
GCC1-202ENST00000473728 SLC12A5Q9H2X9 1139 aa16.35■□□□□ 0.21
GCC1-202ENST00000473728 TIMELESSQ9UNS1 1208 aa16.35■□□□□ 0.21
GCC1-202ENST00000473728 NLRP6P59044 892 aa16.34■□□□□ 0.21
GCC1-202ENST00000473728 SEPT12Q8IYM1 358 aa16.34■□□□□ 0.21
GCC1-202ENST00000473728 CAMTA1Q9Y6Y1 1673 aa16.34■□□□□ 0.21
GCC1-202ENST00000473728 PUS7Q96PZ0 661 aaKnown RBP16.33■□□□□ 0.2
GCC1-202ENST00000473728 ZRANB1Q9UGI0 708 aa16.33■□□□□ 0.2
GCC1-202ENST00000473728 CCDC9Q9Y3X0 531 aaKnown RBP16.33■□□□□ 0.2
GCC1-202ENST00000473728 SPATA31A5Q5VU36 1347 aa16.33■□□□□ 0.2
GCC1-202ENST00000473728 SPATA31A7Q8IWB4 1347 aa16.33■□□□□ 0.2
GCC1-202ENST00000473728 CPDO75976 1380 aa16.33■□□□□ 0.2
GCC1-202ENST00000473728 SLIT3O75094 1523 aa16.33■□□□□ 0.2
GCC1-202ENST00000473728 LMO7Q8WWI1 1683 aa16.32■□□□□ 0.2
GCC1-202ENST00000473728 KTN1Q86UP2 1357 aaKnown RBP16.31■□□□□ 0.2
GCC1-202ENST00000473728 FAM98CQ17RN3 349 aaKnown RBP16.31■□□□□ 0.2
GCC1-202ENST00000473728 MON2Q7Z3U7 1717 aa16.31■□□□□ 0.2
GCC1-202ENST00000473728 TMC1Q8TDI8 760 aa16.3■□□□□ 0.2
GCC1-202ENST00000473728 COL18A1P39060 1754 aa16.29■□□□□ 0.2
GCC1-202ENST00000473728 SPATA31A1Q5TZJ5 1347 aa16.29■□□□□ 0.2
GCC1-202ENST00000473728 TTC21AQ8NDW8 1320 aa16.29■□□□□ 0.2
GCC1-202ENST00000473728 STRN4Q9NRL3 753 aa16.29■□□□□ 0.2
GCC1-202ENST00000473728 USP47Q96K76 1375 aa16.28■□□□□ 0.2
GCC1-202ENST00000473728 LARP1Q6PKG0 1096 aaKnown RBP16.28■□□□□ 0.2
GCC1-202ENST00000473728 AXIN2Q9Y2T1 843 aa16.28■□□□□ 0.2
GCC1-202ENST00000473728 ARHGEF25Q86VW2 580 aa16.27■□□□□ 0.2
GCC1-202ENST00000473728 NME9Q86XW9 330 aa16.27■□□□□ 0.2
GCC1-202ENST00000473728 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.27■□□□□ 0.2
GCC1-202ENST00000473728 CCER1Q8TC90 406 aaPredicted RBP16.27■□□□□ 0.2
GCC1-202ENST00000473728 A0A1W2PP64 1363 aa16.26■□□□□ 0.19
GCC1-202ENST00000473728 KRT27Q7Z3Y8 459 aa16.26■□□□□ 0.19
GCC1-202ENST00000473728 THSD7AQ9UPZ6 1657 aa16.26■□□□□ 0.19
GCC1-202ENST00000473728 AATKQ6ZMQ8 1374 aa16.26■□□□□ 0.19
GCC1-202ENST00000473728 USP31Q70CQ4 1352 aa16.26■□□□□ 0.19
GCC1-202ENST00000473728 EVA1CP58658 441 aa16.25■□□□□ 0.19
GCC1-202ENST00000473728 COL5A2P05997 1499 aaPredicted RBP16.24■□□□□ 0.19
GCC1-202ENST00000473728 ZBTB7CA1YPR0 619 aa16.24■□□□□ 0.19
GCC1-202ENST00000473728 FAM182BQ5T319 152 aa16.24■□□□□ 0.19
GCC1-202ENST00000473728 HDGFL2Q7Z4V5 671 aaPredicted RBP16.24■□□□□ 0.19
GCC1-202ENST00000473728 NFAT5O94916 1531 aa16.24■□□□□ 0.19
GCC1-202ENST00000473728 SOX12O15370 315 aa16.23■□□□□ 0.19
GCC1-202ENST00000473728 USP35Q9P2H5 1018 aa16.23■□□□□ 0.19
GCC1-202ENST00000473728 RGPD5Q99666 1765 aa16.23■□□□□ 0.19
GCC1-202ENST00000473728 EDC4Q6P2E9 1401 aaKnown RBP16.22■□□□□ 0.19
GCC1-202ENST00000473728 USP54Q70EL1 1684 aa16.22■□□□□ 0.19
GCC1-202ENST00000473728 SLC24A1O60721 1099 aa16.22■□□□□ 0.19
GCC1-202ENST00000473728 TMF1P82094 1093 aa16.22■□□□□ 0.19
GCC1-202ENST00000473728 BARGINQ6ZT62 677 aa16.22■□□□□ 0.19
GCC1-202ENST00000473728 CCDC125Q86Z20 511 aa16.22■□□□□ 0.19
GCC1-202ENST00000473728 KCNH5Q8NCM2 988 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms