RNA–Protein interactions for RNA: ENST00000473494.6

SEC22A-204, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 1,011 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-204ENST00000473494 FBXO45P0C2W1 286 aa11.66□□□□□ -0.54
SEC22A-204ENST00000473494 IL21Q9HBE4 155 aa11.66□□□□□ -0.54
SEC22A-204ENST00000473494 EVA1BQ9NVM1 165 aa11.66□□□□□ -0.54
SEC22A-204ENST00000473494 ZBBXA8MT70 800 aa11.65□□□□□ -0.54
SEC22A-204ENST00000473494 TJAP1Q5JTD0 557 aa11.65□□□□□ -0.54
SEC22A-204ENST00000473494 GPKOWQ92917 476 aaPredicted RBP eCLIP11.65□□□□□ -0.545e-7■■■■□ 23.9
SEC22A-204ENST00000473494 UCN2Q96RP3 112 aa11.65□□□□□ -0.54
SEC22A-204ENST00000473494 MYT1LQ9UL68 1186 aa11.65□□□□□ -0.54
SEC22A-204ENST00000473494 PPP1R15AO75807 674 aaPredicted RBP11.64□□□□□ -0.55
SEC22A-204ENST00000473494 KCNH2Q12809 1159 aa11.64□□□□□ -0.55
SEC22A-204ENST00000473494 CTHP32929 405 aa11.63□□□□□ -0.55
SEC22A-204ENST00000473494 EIF4G2P78344 907 aaKnown RBP eCLIP11.63□□□□□ -0.55
SEC22A-204ENST00000473494 CFAP70Q5T0N1 1121 aa11.63□□□□□ -0.55
SEC22A-204ENST00000473494 ARMC2Q8NEN0 867 aa11.63□□□□□ -0.55
SEC22A-204ENST00000473494 PTPN5P54829 565 aa11.62□□□□□ -0.55
SEC22A-204ENST00000473494 PPP1R12CQ9BZL4 782 aa11.62□□□□□ -0.55
SEC22A-204ENST00000473494 GPSM3Q9Y4H4 160 aa11.62□□□□□ -0.55
SEC22A-204ENST00000473494 NBPF14Q5TI25 921 aa11.61□□□□□ -0.55
SEC22A-204ENST00000473494 SEMA3FQ13275 785 aa11.6□□□□□ -0.55
SEC22A-204ENST00000473494 SLC6A16Q9GZN6 736 aa11.6□□□□□ -0.55
SEC22A-204ENST00000473494 PDXDC2PQ6P474 469 aa11.59□□□□□ -0.55
SEC22A-204ENST00000473494 ZNF516Q92618 1163 aa11.59□□□□□ -0.55
SEC22A-204ENST00000473494 PBXIP1Q96AQ6 731 aa11.59□□□□□ -0.55
SEC22A-204ENST00000473494 PALM3A6NDB9 673 aaPredicted RBP11.58□□□□□ -0.56
SEC22A-204ENST00000473494 OCSTAMPQ9BR26 566 aa11.57□□□□□ -0.56
SEC22A-204ENST00000473494 SRPK2P78362 688 aaKnown RBP11.56□□□□□ -0.56
SEC22A-204ENST00000473494 RETREG2Q8NC44 543 aa11.56□□□□□ -0.56
SEC22A-204ENST00000473494 UNC93B1Q9H1C4 597 aa11.56□□□□□ -0.56
SEC22A-204ENST00000473494 PDIA4P13667 645 aaKnown RBP11.55□□□□□ -0.56
SEC22A-204ENST00000473494 PTK2Q05397 1052 aa11.55□□□□□ -0.56
SEC22A-204ENST00000473494 ZNF592Q92610 1267 aa11.55□□□□□ -0.56
SEC22A-204ENST00000473494 MAFBQ9Y5Q3 323 aaPredicted RBP11.55□□□□□ -0.56
SEC22A-204ENST00000473494 TRAIPQ9BWF2 469 aa11.54□□□□□ -0.56
SEC22A-204ENST00000473494 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.53□□□□□ -0.56
SEC22A-204ENST00000473494 SH3BP5LQ7L8J4 393 aa11.53□□□□□ -0.56
SEC22A-204ENST00000473494 NFATC2IPQ8NCF5 419 aa11.53□□□□□ -0.56
SEC22A-204ENST00000473494 ATP9BO43861 1147 aa11.52□□□□□ -0.57
SEC22A-204ENST00000473494 S1PR4O95977 384 aa11.52□□□□□ -0.57
SEC22A-204ENST00000473494 PTCRAQ6ISU1 281 aaPredicted RBP11.52□□□□□ -0.57
SEC22A-204ENST00000473494 ITGBL1O95965 494 aaPredicted RBP11.51□□□□□ -0.57
SEC22A-204ENST00000473494 TBC1D9Q6ZT07 1266 aa11.51□□□□□ -0.57
SEC22A-204ENST00000473494 CCDC24Q8N4L8 307 aa11.51□□□□□ -0.57
SEC22A-204ENST00000473494 NKX2-3Q8TAU0 364 aa11.51□□□□□ -0.57
SEC22A-204ENST00000473494 TFIP11Q9UBB9 837 aaKnown RBP11.51□□□□□ -0.57
SEC22A-204ENST00000473494 LMOD1P29536 600 aaPredicted RBP11.5□□□□□ -0.57
SEC22A-204ENST00000473494 MCCD1P59942 119 aaPredicted RBP11.5□□□□□ -0.57
SEC22A-204ENST00000473494 SH3RF1Q7Z6J0 888 aa11.5□□□□□ -0.57
SEC22A-204ENST00000473494 ARHGAP9Q9BRR9 750 aa11.5□□□□□ -0.57
SEC22A-204ENST00000473494 FCF1Q9Y324 198 aaKnown RBP11.5□□□□□ -0.57
SEC22A-204ENST00000473494 RFX1P22670 979 aa11.49□□□□□ -0.57
SEC22A-204ENST00000473494 ADAM32Q8TC27 787 aa11.49□□□□□ -0.57
SEC22A-204ENST00000473494 PIK3CDO00329 1044 aa11.48□□□□□ -0.57
SEC22A-204ENST00000473494 HCSTQ9UBK5 93 aa11.47□□□□□ -0.57
SEC22A-204ENST00000473494 USTQ9Y2C2 406 aa11.47□□□□□ -0.57
SEC22A-204ENST00000473494 PLEKHM2Q8IWE5 1019 aa11.46□□□□□ -0.57
SEC22A-204ENST00000473494 FAM174AQ8TBP5 190 aa11.46□□□□□ -0.57
SEC22A-204ENST00000473494 RNF166Q96A37 237 aaPredicted RBP11.46□□□□□ -0.57
SEC22A-204ENST00000473494 PCDHB9Q9Y5E1 797 aa11.46□□□□□ -0.57
SEC22A-204ENST00000473494 ATG7O95352 703 aa11.45□□□□□ -0.58
SEC22A-204ENST00000473494 TRIM26Q12899 539 aaPredicted RBP11.45□□□□□ -0.58
SEC22A-204ENST00000473494 ACIN1Q9UKV3 1341 aaKnown RBP11.44□□□□□ -0.58
SEC22A-204ENST00000473494 USP17L3A6NCW0 530 aa11.44□□□□□ -0.58
SEC22A-204ENST00000473494 USP17L4A6NCW7 530 aa11.44□□□□□ -0.58
SEC22A-204ENST00000473494 USP17L5A8MUK1 530 aa11.44□□□□□ -0.58
SEC22A-204ENST00000473494 KCNC4Q03721 635 aa11.44□□□□□ -0.58
SEC22A-204ENST00000473494 USP17L2Q6R6M4 530 aa11.44□□□□□ -0.58
SEC22A-204ENST00000473494 USP17L1Q7RTZ2 530 aa11.44□□□□□ -0.58
SEC22A-204ENST00000473494 ZNF511Q8NB15 262 aa11.44□□□□□ -0.58
SEC22A-204ENST00000473494 CEP126Q9P2H0 1117 aa11.44□□□□□ -0.58
SEC22A-204ENST00000473494 CHIC2Q9UKJ5 165 aa11.44□□□□□ -0.58
SEC22A-204ENST00000473494 PDE4CQ08493 712 aa11.43□□□□□ -0.58
SEC22A-204ENST00000473494 ZBTB33Q86T24 672 aa11.43□□□□□ -0.58
SEC22A-204ENST00000473494 BPHLQ86WA6 291 aaPredicted RBP11.43□□□□□ -0.58
SEC22A-204ENST00000473494 PHTF2Q8N3S3 785 aa11.43□□□□□ -0.58
SEC22A-204ENST00000473494 C1QTNF2Q9BXJ5 285 aa11.43□□□□□ -0.58
SEC22A-204ENST00000473494 LINC01559Q495D7 138 aa11.42□□□□□ -0.58
SEC22A-204ENST00000473494 BAP1Q92560 729 aa11.42□□□□□ -0.58
SEC22A-204ENST00000473494 PCDH10Q9P2E7 1040 aa11.42□□□□□ -0.58
SEC22A-204ENST00000473494 SKIP12755 728 aa11.41□□□□□ -0.58
SEC22A-204ENST00000473494 SLFNL1Q499Z3 407 aa11.41□□□□□ -0.58
SEC22A-204ENST00000473494 ERFEQ4G0M1 354 aa11.41□□□□□ -0.58
SEC22A-204ENST00000473494 C4orf48Q5BLP8 95 aa11.41□□□□□ -0.58
SEC22A-204ENST00000473494 CARD14Q9BXL6 1004 aa11.41□□□□□ -0.58
SEC22A-204ENST00000473494 MAGEB6P1A0A0J9YX57 407 aa11.4□□□□□ -0.58
SEC22A-204ENST00000473494 CSB-PGBD3P0DP91 1061 aa11.4□□□□□ -0.58
SEC22A-204ENST00000473494 KANK4Q5T7N3 995 aaPredicted RBP11.4□□□□□ -0.58
SEC22A-204ENST00000473494 RNF135Q8IUD6 432 aa11.4□□□□□ -0.58
SEC22A-204ENST00000473494 ANKLE1Q8NAG6 615 aa11.4□□□□□ -0.58
SEC22A-204ENST00000473494 FOXJ1Q92949 421 aa11.4□□□□□ -0.58
SEC22A-204ENST00000473494 RNF223E7ERA6 249 aa11.39□□□□□ -0.59
SEC22A-204ENST00000473494 SPNS2Q8IVW8 549 aa11.39□□□□□ -0.59
SEC22A-204ENST00000473494 KCTD17Q8N5Z5 321 aa11.39□□□□□ -0.59
SEC22A-204ENST00000473494 PODXL2Q9NZ53 605 aa11.39□□□□□ -0.59
SEC22A-204ENST00000473494 ELOAQ14241 798 aaKnown RBP11.38□□□□□ -0.59
SEC22A-204ENST00000473494 DZIP3Q86Y13 1208 aaKnown RBP11.38□□□□□ -0.59
SEC22A-204ENST00000473494 TRMT44Q8IYL2 757 aaKnown RBP11.38□□□□□ -0.59
SEC22A-204ENST00000473494 PLPP7Q8NBV4 271 aa11.38□□□□□ -0.59
SEC22A-204ENST00000473494 SLC10A4Q96EP9 437 aa11.38□□□□□ -0.59
SEC22A-204ENST00000473494 LZTS3O60299 673 aaPredicted RBP11.37□□□□□ -0.59
SEC22A-204ENST00000473494 TRAF7Q6Q0C0 670 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 109.4 ms