RNA–Protein interactions for RNA: ENST00000473344.1

CKS1B-205, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-205ENST00000473344 PLEKHH1Q9ULM0 1364 aa10.26□□□□□ -0.77
CKS1B-205ENST00000473344 SPATA31E1Q6ZUB1 1445 aa10.26□□□□□ -0.77
CKS1B-205ENST00000473344 YTHDC2Q9H6S0 1430 aaKnown RBP10.26□□□□□ -0.77
CKS1B-205ENST00000473344 RALGAPBQ86X10 1494 aa10.26□□□□□ -0.77
CKS1B-205ENST00000473344 ZNF579Q8NAF0 562 aaKnown RBP10.26□□□□□ -0.77
CKS1B-205ENST00000473344 PHF8Q9UPP1 1060 aa10.26□□□□□ -0.77
CKS1B-205ENST00000473344 PIK3C2GO75747 1445 aa10.25□□□□□ -0.77
CKS1B-205ENST00000473344 BLMP54132 1417 aaPredicted RBP10.25□□□□□ -0.77
CKS1B-205ENST00000473344 KIF1AQ12756 1690 aa10.25□□□□□ -0.77
CKS1B-205ENST00000473344 MARF1Q9Y4F3 1742 aaKnown RBP10.25□□□□□ -0.77
CKS1B-205ENST00000473344 SLIT2O94813 1529 aa10.25□□□□□ -0.77
CKS1B-205ENST00000473344 A0A0G2JS52 829 aa10.25□□□□□ -0.77
CKS1B-205ENST00000473344 SIRT1Q96EB6 747 aa10.25□□□□□ -0.77
CKS1B-205ENST00000473344 CREBZFQ9NS37 354 aa10.25□□□□□ -0.77
CKS1B-205ENST00000473344 DHX57Q6P158 1386 aaKnown RBP10.25□□□□□ -0.77
CKS1B-205ENST00000473344 SEPT12Q8IYM1 358 aa10.24□□□□□ -0.77
CKS1B-205ENST00000473344 CABLES1Q8TDN4 633 aa10.24□□□□□ -0.77
CKS1B-205ENST00000473344 KNDC1Q76NI1 1749 aa10.24□□□□□ -0.77
CKS1B-205ENST00000473344 TNS3Q68CZ2 1445 aa10.24□□□□□ -0.77
CKS1B-205ENST00000473344 USP32Q8NFA0 1604 aa10.23□□□□□ -0.77
CKS1B-205ENST00000473344 PAK3O75914 559 aaPredicted RBP10.23□□□□□ -0.77
CKS1B-205ENST00000473344 SAFB2Q14151 953 aaKnown RBP eCLIP10.23□□□□□ -0.77
CKS1B-205ENST00000473344 VPS72Q15906 364 aa10.23□□□□□ -0.77
CKS1B-205ENST00000473344 DCBLD2Q96PD2 775 aa10.23□□□□□ -0.77
CKS1B-205ENST00000473344 PRAM1Q96QH2 718 aa10.23□□□□□ -0.77
CKS1B-205ENST00000473344 C14orf93Q9H972 538 aaKnown RBP10.23□□□□□ -0.77
CKS1B-205ENST00000473344 POGKQ9P215 609 aa10.23□□□□□ -0.77
CKS1B-205ENST00000473344 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.23□□□□□ -0.77
CKS1B-205ENST00000473344 FMN2Q9NZ56 1722 aa10.23□□□□□ -0.77
CKS1B-205ENST00000473344 ACIN1Q9UKV3 1341 aaKnown RBP10.23□□□□□ -0.77
CKS1B-205ENST00000473344 ARHGEF10O15013 1369 aa10.23□□□□□ -0.77
CKS1B-205ENST00000473344 GLI3P10071 1580 aa10.22□□□□□ -0.77
CKS1B-205ENST00000473344 CFAP70Q5T0N1 1121 aa10.22□□□□□ -0.77
CKS1B-205ENST00000473344 KRT27Q7Z3Y8 459 aa10.22□□□□□ -0.77
CKS1B-205ENST00000473344 DEFB132Q7Z7B7 95 aa10.22□□□□□ -0.77
CKS1B-205ENST00000473344 IFT172Q9UG01 1749 aa10.21□□□□□ -0.77
CKS1B-205ENST00000473344 PMFBP1Q8TBY8 1022 aa10.21□□□□□ -0.77
CKS1B-205ENST00000473344 SBNO1A3KN83 1393 aa10.21□□□□□ -0.78
CKS1B-205ENST00000473344 NRXN1Q9ULB1 1477 aa10.2□□□□□ -0.78
CKS1B-205ENST00000473344 FAM83GA6ND36 823 aa10.19□□□□□ -0.78
CKS1B-205ENST00000473344 ONECUT3O60422 494 aaPredicted RBP10.19□□□□□ -0.78
CKS1B-205ENST00000473344 BAG6P46379 1132 aa10.19□□□□□ -0.78
CKS1B-205ENST00000473344 ANKARQ7Z5J8 1434 aa10.18□□□□□ -0.78
CKS1B-205ENST00000473344 GPRASP1Q5JY77 1395 aa10.18□□□□□ -0.78
CKS1B-205ENST00000473344 POTEIP0CG38 1075 aa10.18□□□□□ -0.78
CKS1B-205ENST00000473344 FAM98CQ17RN3 349 aaKnown RBP10.18□□□□□ -0.78
CKS1B-205ENST00000473344 BTG4Q9NY30 223 aa10.18□□□□□ -0.78
CKS1B-205ENST00000473344 EIF3AQ14152 1382 aaKnown RBP10.17□□□□□ -0.78
CKS1B-205ENST00000473344 NWD2Q9ULI1 1742 aa10.17□□□□□ -0.78
CKS1B-205ENST00000473344 HIRIP3Q9BW71 556 aaPredicted RBP10.17□□□□□ -0.78
CKS1B-205ENST00000473344 TRAK1Q9UPV9 953 aa10.17□□□□□ -0.78
CKS1B-205ENST00000473344 PLCH1Q4KWH8 1693 aa10.17□□□□□ -0.78
CKS1B-205ENST00000473344 MINK1Q8N4C8 1332 aaPredicted RBP10.16□□□□□ -0.78
CKS1B-205ENST00000473344 NGDNQ8NEJ9 315 aaKnown RBP10.16□□□□□ -0.78
CKS1B-205ENST00000473344 PSDA5PKW4 1024 aaPredicted RBP10.15□□□□□ -0.78
CKS1B-205ENST00000473344 DLC1Q96QB1 1528 aa10.15□□□□□ -0.78
CKS1B-205ENST00000473344 BRWD3Q6RI45 1802 aa10.14□□□□□ -0.79
CKS1B-205ENST00000473344 RGPD8O14715 1765 aaPredicted RBP10.14□□□□□ -0.79
CKS1B-205ENST00000473344 DCAF11Q8TEB1 546 aa10.14□□□□□ -0.79
CKS1B-205ENST00000473344 PRDM11Q9NQV5 511 aa10.14□□□□□ -0.79
CKS1B-205ENST00000473344 KDM2AQ9Y2K7 1162 aa10.14□□□□□ -0.79
CKS1B-205ENST00000473344 ABCA3Q99758 1704 aa10.13□□□□□ -0.79
CKS1B-205ENST00000473344 WASLO00401 505 aaPredicted RBP10.13□□□□□ -0.79
CKS1B-205ENST00000473344 EN1Q05925 392 aaPredicted RBP10.13□□□□□ -0.79
CKS1B-205ENST00000473344 ADGRB2O60241 1585 aa10.13□□□□□ -0.79
CKS1B-205ENST00000473344 SPATA31A5Q5VU36 1347 aa10.12□□□□□ -0.79
CKS1B-205ENST00000473344 SPATA31A7Q8IWB4 1347 aa10.12□□□□□ -0.79
CKS1B-205ENST00000473344 HRCP23327 699 aa10.12□□□□□ -0.79
CKS1B-205ENST00000473344 FAM182BQ5T319 152 aa10.12□□□□□ -0.79
CKS1B-205ENST00000473344 TULP4Q9NRJ4 1543 aa10.12□□□□□ -0.79
CKS1B-205ENST00000473344 COL14A1Q05707 1796 aaKnown RBP10.11□□□□□ -0.79
CKS1B-205ENST00000473344 PRR36Q9H6K5 1346 aa10.11□□□□□ -0.79
CKS1B-205ENST00000473344 ADGRB1O14514 1584 aa10.11□□□□□ -0.79
CKS1B-205ENST00000473344 STAC3Q96MF2 364 aa10.11□□□□□ -0.79
CKS1B-205ENST00000473344 RAB3GAP2Q9H2M9 1393 aa10.11□□□□□ -0.79
CKS1B-205ENST00000473344 EVA1CP58658 441 aa10.1□□□□□ -0.79
CKS1B-205ENST00000473344 R3HDM1Q15032 1099 aaKnown RBP10.1□□□□□ -0.79
CKS1B-205ENST00000473344 STRN4Q9NRL3 753 aa10.1□□□□□ -0.79
CKS1B-205ENST00000473344 LRP5O75197 1615 aa10.1□□□□□ -0.79
CKS1B-205ENST00000473344 NRAPQ86VF7 1730 aa10.1□□□□□ -0.79
CKS1B-205ENST00000473344 TRPM3Q9HCF6 1732 aaPredicted RBP10.1□□□□□ -0.79
CKS1B-205ENST00000473344 CHRNA2Q15822 529 aa10.09□□□□□ -0.79
CKS1B-205ENST00000473344 FAM196AQ6ZSG2 479 aa10.09□□□□□ -0.79
CKS1B-205ENST00000473344 NUDT16Q96DE0 195 aaKnown RBP10.09□□□□□ -0.79
CKS1B-205ENST00000473344 USP35Q9P2H5 1018 aa10.09□□□□□ -0.79
CKS1B-205ENST00000473344 KIAA0232Q92628 1395 aa10.09□□□□□ -0.79
CKS1B-205ENST00000473344 ALS2Q96Q42 1657 aa10.09□□□□□ -0.79
CKS1B-205ENST00000473344 SPATA31A1Q5TZJ5 1347 aa10.08□□□□□ -0.8
CKS1B-205ENST00000473344 TRIM37O94972 964 aa10.08□□□□□ -0.8
CKS1B-205ENST00000473344 ZC3H6P61129 1189 aaKnown RBP10.08□□□□□ -0.8
CKS1B-205ENST00000473344 PDE3BQ13370 1112 aa10.08□□□□□ -0.8
CKS1B-205ENST00000473344 EZH2Q15910 746 aaKnown RBP10.08□□□□□ -0.8
CKS1B-205ENST00000473344 RGPD1P0DJD0 1748 aa10.07□□□□□ -0.8
CKS1B-205ENST00000473344 APBA3O96018 575 aa10.07□□□□□ -0.8
CKS1B-205ENST00000473344 NUTM2GQ5VZR2 741 aa10.07□□□□□ -0.8
CKS1B-205ENST00000473344 ATP7BP35670 1465 aa10.06□□□□□ -0.8
CKS1B-205ENST00000473344 ABTB2Q8N961 1025 aa10.06□□□□□ -0.8
CKS1B-205ENST00000473344 CDK19Q9BWU1 502 aa10.06□□□□□ -0.8
CKS1B-205ENST00000473344 DISP2A7MBM2 1401 aa10.06□□□□□ -0.8
CKS1B-205ENST00000473344 ACEP12821 1306 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms