RNA–Protein interactions for RNA: ENST00000473334.1

PTP4A1-203, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 3

Gene PTP4A1, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-203ENST00000473334 CABP2Q9NPB3 220 aa32.16■■■□□ 2.74
PTP4A1-203ENST00000473334 ACEP12821 1306 aa32.16■■■□□ 2.74
PTP4A1-203ENST00000473334 RGS12O14924 1447 aa32.16■■■□□ 2.74
PTP4A1-203ENST00000473334 PPIP5K1Q6PFW1 1433 aa32.15■■■□□ 2.74
PTP4A1-203ENST00000473334 CRYBG1Q9Y4K1 1723 aa32.14■■■□□ 2.74
PTP4A1-203ENST00000473334 PLCH1Q4KWH8 1693 aa32.14■■■□□ 2.74
PTP4A1-203ENST00000473334 EVC2Q86UK5 1308 aa32.13■■■□□ 2.73
PTP4A1-203ENST00000473334 NWD2Q9ULI1 1742 aa32.12■■■□□ 2.73
PTP4A1-203ENST00000473334 CARD11Q9BXL7 1154 aa32.11■■■□□ 2.73
PTP4A1-203ENST00000473334 UNC5CLQ8IV45 518 aa32.09■■■□□ 2.73
PTP4A1-203ENST00000473334 PHRF1Q9P1Y6 1649 aaKnown RBP32.06■■■□□ 2.72
PTP4A1-203ENST00000473334 SBNO2Q9Y2G9 1366 aa32.06■■■□□ 2.72
PTP4A1-203ENST00000473334 GJD4Q96KN9 370 aaPredicted RBP32.04■■■□□ 2.72
PTP4A1-203ENST00000473334 COL14A1Q05707 1796 aaKnown RBP32.04■■■□□ 2.72
PTP4A1-203ENST00000473334 CABP1Q9NZU7 370 aa32.03■■■□□ 2.72
PTP4A1-203ENST00000473334 FAM83GA6ND36 823 aa32.02■■■□□ 2.72
PTP4A1-203ENST00000473334 PCGF6Q9BYE7 350 aa32.02■■■□□ 2.72
PTP4A1-203ENST00000473334 BRD4O60885 1362 aaPredicted RBP32.02■■■□□ 2.72
PTP4A1-203ENST00000473334 GLI3P10071 1580 aa32.01■■■□□ 2.71
PTP4A1-203ENST00000473334 NRAPQ86VF7 1730 aa32■■■□□ 2.71
PTP4A1-203ENST00000473334 USP6P35125 1406 aa31.99■■■□□ 2.71
PTP4A1-203ENST00000473334 ATAD2Q6PL18 1390 aa31.98■■■□□ 2.71
PTP4A1-203ENST00000473334 NUTM2GQ5VZR2 741 aa31.97■■■□□ 2.71
PTP4A1-203ENST00000473334 ABTB2Q8N961 1025 aa31.97■■■□□ 2.71
PTP4A1-203ENST00000473334 UPF1Q92900 1129 aaKnown RBP eCLIP31.97■■■□□ 2.71
PTP4A1-203ENST00000473334 CLSPNQ9HAW4 1339 aa31.97■■■□□ 2.71
PTP4A1-203ENST00000473334 VPS72Q15906 364 aa31.96■■■□□ 2.71
PTP4A1-203ENST00000473334 NRKQ7Z2Y5 1582 aa31.94■■■□□ 2.7
PTP4A1-203ENST00000473334 AKAP12Q02952 1782 aa31.94■■■□□ 2.7
PTP4A1-203ENST00000473334 PRDM11Q9NQV5 511 aa31.93■■■□□ 2.7
PTP4A1-203ENST00000473334 BTG4Q9NY30 223 aa31.93■■■□□ 2.7
PTP4A1-203ENST00000473334 KIAA0232Q92628 1395 aa31.92■■■□□ 2.7
PTP4A1-203ENST00000473334 USP19O94966 1318 aa31.91■■■□□ 2.7
PTP4A1-203ENST00000473334 NLRP13Q86W25 1043 aa31.9■■■□□ 2.7
PTP4A1-203ENST00000473334 CCDC9Q9Y3X0 531 aaKnown RBP31.9■■■□□ 2.7
PTP4A1-203ENST00000473334 SSH2Q76I76 1423 aa31.9■■■□□ 2.7
PTP4A1-203ENST00000473334 ZNF692Q9BU19 519 aaPredicted RBP31.88■■■□□ 2.69
PTP4A1-203ENST00000473334 PIK3C2AO00443 1686 aa31.87■■■□□ 2.69
PTP4A1-203ENST00000473334 TIMELESSQ9UNS1 1208 aa31.87■■■□□ 2.69
PTP4A1-203ENST00000473334 CPSF1Q10570 1443 aaKnown RBP31.86■■■□□ 2.69
PTP4A1-203ENST00000473334 ZC3H6P61129 1189 aaKnown RBP31.86■■■□□ 2.69
PTP4A1-203ENST00000473334 MON2Q7Z3U7 1717 aa31.84■■■□□ 2.69
PTP4A1-203ENST00000473334 CHRNA2Q15822 529 aa31.84■■■□□ 2.69
PTP4A1-203ENST00000473334 CPDO75976 1380 aa31.83■■■□□ 2.69
PTP4A1-203ENST00000473334 BRWD3Q6RI45 1802 aa31.82■■■□□ 2.68
PTP4A1-203ENST00000473334 ST20-MTHFSA0A0A6YYL1 179 aa31.82■■■□□ 2.68
PTP4A1-203ENST00000473334 NLRP6P59044 892 aa31.82■■■□□ 2.68
PTP4A1-203ENST00000473334 SLIT3O75094 1523 aa31.81■■■□□ 2.68
PTP4A1-203ENST00000473334 GCP02774 474 aa31.81■■■□□ 2.68
PTP4A1-203ENST00000473334 KTN1Q86UP2 1357 aaKnown RBP31.81■■■□□ 2.68
PTP4A1-203ENST00000473334 TTC21BQ7Z4L5 1316 aa31.8■■■□□ 2.68
PTP4A1-203ENST00000473334 ONECUT3O60422 494 aaPredicted RBP31.8■■■□□ 2.68
PTP4A1-203ENST00000473334 PUS7Q96PZ0 661 aaKnown RBP31.8■■■□□ 2.68
PTP4A1-203ENST00000473334 TESK2Q96S53 571 aa31.8■■■□□ 2.68
PTP4A1-203ENST00000473334 TTC21AQ8NDW8 1320 aa31.79■■■□□ 2.68
PTP4A1-203ENST00000473334 SEPT12Q8IYM1 358 aa31.79■■■□□ 2.68
PTP4A1-203ENST00000473334 LMO7Q8WWI1 1683 aa31.79■■■□□ 2.68
PTP4A1-203ENST00000473334 SLC24A1O60721 1099 aa31.78■■■□□ 2.68
PTP4A1-203ENST00000473334 USP47Q96K76 1375 aa31.78■■■□□ 2.68
PTP4A1-203ENST00000473334 SPATA31A5Q5VU36 1347 aa31.77■■■□□ 2.68
PTP4A1-203ENST00000473334 SPATA31A7Q8IWB4 1347 aa31.77■■■□□ 2.68
PTP4A1-203ENST00000473334 CD163L1Q9NR16 1453 aa31.77■■■□□ 2.68
PTP4A1-203ENST00000473334 EP400Q96L91 3159 aa31.76■■■□□ 2.68
PTP4A1-203ENST00000473334 TMC1Q8TDI8 760 aa31.76■■■□□ 2.67
PTP4A1-203ENST00000473334 CAMTA1Q9Y6Y1 1673 aa31.74■■■□□ 2.67
PTP4A1-203ENST00000473334 FAM98CQ17RN3 349 aaKnown RBP31.74■■■□□ 2.67
PTP4A1-203ENST00000473334 STRN4Q9NRL3 753 aa31.74■■■□□ 2.67
PTP4A1-203ENST00000473334 CCER1Q8TC90 406 aaPredicted RBP31.73■■■□□ 2.67
PTP4A1-203ENST00000473334 SLC12A5Q9H2X9 1139 aa31.72■■■□□ 2.67
PTP4A1-203ENST00000473334 A0A0G2JS52 829 aa31.71■■■□□ 2.67
PTP4A1-203ENST00000473334 MYT1Q01538 1121 aa31.71■■■□□ 2.67
PTP4A1-203ENST00000473334 HDGFL2Q7Z4V5 671 aaPredicted RBP31.71■■■□□ 2.67
PTP4A1-203ENST00000473334 SPATA31A1Q5TZJ5 1347 aa31.7■■■□□ 2.66
PTP4A1-203ENST00000473334 THSD7AQ9UPZ6 1657 aa31.7■■■□□ 2.66
PTP4A1-203ENST00000473334 NINLQ9Y2I6 1382 aa31.69■■■□□ 2.66
PTP4A1-203ENST00000473334 EVA1CP58658 441 aa31.69■■■□□ 2.66
PTP4A1-203ENST00000473334 USP54Q70EL1 1684 aa31.68■■■□□ 2.66
PTP4A1-203ENST00000473334 TERF2IPQ9NYB0 399 aa31.68■■■□□ 2.66
PTP4A1-203ENST00000473334 EDC4Q6P2E9 1401 aaKnown RBP31.67■■■□□ 2.66
PTP4A1-203ENST00000473334 KRT27Q7Z3Y8 459 aa31.67■■■□□ 2.66
PTP4A1-203ENST00000473334 A0A1W2PP64 1363 aa31.67■■■□□ 2.66
PTP4A1-203ENST00000473334 SUGP2Q8IX01 1082 aaKnown RBP eCLIP31.66■■■□□ 2.66
PTP4A1-203ENST00000473334 KCNH5Q8NCM2 988 aa31.66■■■□□ 2.66
PTP4A1-203ENST00000473334 AATKQ6ZMQ8 1374 aa31.66■■■□□ 2.66
PTP4A1-203ENST00000473334 COL5A2P05997 1499 aaPredicted RBP31.65■■■□□ 2.66
PTP4A1-203ENST00000473334 ZBTB7CA1YPR0 619 aa31.65■■■□□ 2.66
PTP4A1-203ENST00000473334 TMF1P82094 1093 aa31.65■■■□□ 2.66
PTP4A1-203ENST00000473334 COL18A1P39060 1754 aa31.64■■■□□ 2.66
PTP4A1-203ENST00000473334 CCDC125Q86Z20 511 aa31.64■■■□□ 2.66
PTP4A1-203ENST00000473334 USP31Q70CQ4 1352 aa31.64■■■□□ 2.66
PTP4A1-203ENST00000473334 NFAT5O94916 1531 aa31.63■■■□□ 2.65
PTP4A1-203ENST00000473334 LARP1Q6PKG0 1096 aaKnown RBP31.62■■■□□ 2.65
PTP4A1-203ENST00000473334 NME9Q86XW9 330 aa31.6■■■□□ 2.65
PTP4A1-203ENST00000473334 BLMP54132 1417 aaPredicted RBP31.59■■■□□ 2.65
PTP4A1-203ENST00000473334 SOX12O15370 315 aa31.59■■■□□ 2.65
PTP4A1-203ENST00000473334 ARHGEF25Q86VW2 580 aa31.59■■■□□ 2.65
PTP4A1-203ENST00000473334 USP35Q9P2H5 1018 aa31.59■■■□□ 2.65
PTP4A1-203ENST00000473334 ZRANB1Q9UGI0 708 aa31.59■■■□□ 2.65
PTP4A1-203ENST00000473334 BARGINQ6ZT62 677 aa31.57■■■□□ 2.64
PTP4A1-203ENST00000473334 CRB1P82279 1406 aa31.57■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms