RNA–Protein interactions for RNA: ENST00000473073.1

PCCB-211, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 2

Gene PCCB, Length 1,964 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-211ENST00000473073 PHF8Q9UPP1 1060 aa17■□□□□ 0.31
PCCB-211ENST00000473073 TTC21BQ7Z4L5 1316 aa17■□□□□ 0.31
PCCB-211ENST00000473073 ATF3P18847 181 aa16.99■□□□□ 0.31
PCCB-211ENST00000473073 C1orf167Q5SNV9 1468 aa16.99■□□□□ 0.31
PCCB-211ENST00000473073 FBLN1P23142 703 aa16.98■□□□□ 0.31
PCCB-211ENST00000473073 PNISRQ8TF01 805 aaKnown RBP16.98■□□□□ 0.31
PCCB-211ENST00000473073 MSH6P52701 1360 aa16.98■□□□□ 0.31
PCCB-211ENST00000473073 NCOA3Q9Y6Q9 1424 aa16.98■□□□□ 0.31
PCCB-211ENST00000473073 MST1RQ04912 1400 aa16.98■□□□□ 0.31
PCCB-211ENST00000473073 SSH2Q76I76 1423 aa16.98■□□□□ 0.31
PCCB-211ENST00000473073 DCCP43146 1447 aa16.96■□□□□ 0.31
PCCB-211ENST00000473073 SENP3-EIF4A1A0A087X0R7 540 aa16.96■□□□□ 0.31
PCCB-211ENST00000473073 XPCQ01831 940 aaPredicted RBP16.95■□□□□ 0.3
PCCB-211ENST00000473073 FOXO3O43524 673 aa16.95■□□□□ 0.3
PCCB-211ENST00000473073 MTHFSP49914 203 aa16.95■□□□□ 0.3
PCCB-211ENST00000473073 PIK3C2AO00443 1686 aa16.94■□□□□ 0.3
PCCB-211ENST00000473073 PAK3O75914 559 aaPredicted RBP16.94■□□□□ 0.3
PCCB-211ENST00000473073 CADPS2Q86UW7 1296 aa16.94■□□□□ 0.3
PCCB-211ENST00000473073 COG3Q96JB2 828 aa16.94■□□□□ 0.3
PCCB-211ENST00000473073 HNRNPUQ00839 825 aaKnown RBP eCLIP16.93■□□□□ 0.3
PCCB-211ENST00000473073 NUTM2GQ5VZR2 741 aa16.93■□□□□ 0.3
PCCB-211ENST00000473073 PSME1Q06323 249 aa16.92■□□□□ 0.3
PCCB-211ENST00000473073 DDX17Q92841 729 aaKnown RBP16.92■□□□□ 0.3
PCCB-211ENST00000473073 SOX12O15370 315 aa16.91■□□□□ 0.3
PCCB-211ENST00000473073 AEBP2Q6ZN18 517 aaPredicted RBP16.91■□□□□ 0.3
PCCB-211ENST00000473073 OVOS2A0A0J9YW53 1432 aa16.91■□□□□ 0.3
PCCB-211ENST00000473073 OVOS2Q6IE36 1432 aa16.91■□□□□ 0.3
PCCB-211ENST00000473073 TTC21AQ8NDW8 1320 aa16.91■□□□□ 0.3
PCCB-211ENST00000473073 KIF1AQ12756 1690 aa16.91■□□□□ 0.3
PCCB-211ENST00000473073 PPM1GO15355 546 aaPredicted RBP16.89■□□□□ 0.3
PCCB-211ENST00000473073 MAP2P11137 1827 aaKnown RBP16.89■□□□□ 0.29
PCCB-211ENST00000473073 SHPRHQ149N8 1683 aa16.89■□□□□ 0.29
PCCB-211ENST00000473073 RRS1Q15050 365 aaKnown RBP16.89■□□□□ 0.29
PCCB-211ENST00000473073 EMILIN1Q9Y6C2 1016 aa16.89■□□□□ 0.29
PCCB-211ENST00000473073 LTBP4Q8N2S1 1624 aa16.89■□□□□ 0.29
PCCB-211ENST00000473073 MARF1Q9Y4F3 1742 aaKnown RBP16.88■□□□□ 0.29
PCCB-211ENST00000473073 WDR43Q15061 677 aaKnown RBP eCLIP16.88■□□□□ 0.29
PCCB-211ENST00000473073 ABTB2Q8N961 1025 aa16.88■□□□□ 0.29
PCCB-211ENST00000473073 POLKQ9UBT6 870 aa16.88■□□□□ 0.29
PCCB-211ENST00000473073 ADAMTS8Q9UP79 889 aa16.88■□□□□ 0.29
PCCB-211ENST00000473073 PLEKHG5O94827 1062 aa16.88■□□□□ 0.29
PCCB-211ENST00000473073 NLRP6P59044 892 aa16.88■□□□□ 0.29
PCCB-211ENST00000473073 CENPBP07199 599 aaPredicted RBP16.87■□□□□ 0.29
PCCB-211ENST00000473073 TRPM3Q9HCF6 1732 aaPredicted RBP16.87■□□□□ 0.29
PCCB-211ENST00000473073 KRT28Q7Z3Y7 464 aa16.86■□□□□ 0.29
PCCB-211ENST00000473073 SCAF1Q9H7N4 1312 aaKnown RBP16.86■□□□□ 0.29
PCCB-211ENST00000473073 CFAP53Q96M91 514 aa16.86■□□□□ 0.29
PCCB-211ENST00000473073 SLAIN2Q9P270 581 aa16.86■□□□□ 0.29
PCCB-211ENST00000473073 LMOD2Q6P5Q4 547 aa16.85■□□□□ 0.29
PCCB-211ENST00000473073 BRINP3Q76B58 766 aa16.85■□□□□ 0.29
PCCB-211ENST00000473073 COL3A1P02461 1466 aaPredicted RBP16.85■□□□□ 0.29
PCCB-211ENST00000473073 USP31Q70CQ4 1352 aa16.85■□□□□ 0.29
PCCB-211ENST00000473073 AATKQ6ZMQ8 1374 aa16.84■□□□□ 0.29
PCCB-211ENST00000473073 USP54Q70EL1 1684 aa16.83■□□□□ 0.28
PCCB-211ENST00000473073 CCDC146Q8IYE0 955 aa16.82■□□□□ 0.28
PCCB-211ENST00000473073 BLMP54132 1417 aaPredicted RBP16.82■□□□□ 0.28
PCCB-211ENST00000473073 SMG6Q86US8 1419 aaKnown RBP16.82■□□□□ 0.28
PCCB-211ENST00000473073 PEAK1Q9H792 1746 aa16.82■□□□□ 0.28
PCCB-211ENST00000473073 SALL2Q9Y467 1007 aaPredicted RBP16.82■□□□□ 0.28
PCCB-211ENST00000473073 NPHP3Q7Z494 1330 aa16.81■□□□□ 0.28
PCCB-211ENST00000473073 PNPLA6Q8IY17 1366 aa16.8■□□□□ 0.28
PCCB-211ENST00000473073 U2SURPO15042 1029 aaKnown RBP16.8■□□□□ 0.28
PCCB-211ENST00000473073 PXDNQ92626 1479 aa16.8■□□□□ 0.28
PCCB-211ENST00000473073 CDK12Q9NYV4 1490 aaPredicted RBP16.8■□□□□ 0.28
PCCB-211ENST00000473073 ALS2Q96Q42 1657 aa16.8■□□□□ 0.28
PCCB-211ENST00000473073 MAP3K19Q56UN5 1328 aa16.79■□□□□ 0.28
PCCB-211ENST00000473073 DIAPH1O60610 1272 aaKnown RBP16.78■□□□□ 0.28
PCCB-211ENST00000473073 U2AF1L5P0DN76 240 aaPredicted RBP16.78■□□□□ 0.28
PCCB-211ENST00000473073 U2AF1Q01081 240 aaKnown RBP eCLIP16.78■□□□□ 0.28
PCCB-211ENST00000473073 ZBED9Q6R2W3 1325 aa16.77■□□□□ 0.28
PCCB-211ENST00000473073 INSRP06213 1382 aa16.76■□□□□ 0.27
PCCB-211ENST00000473073 HSP90AB2PQ58FF8 381 aa16.76■□□□□ 0.27
PCCB-211ENST00000473073 NFAT5O94916 1531 aa16.76■□□□□ 0.27
PCCB-211ENST00000473073 LTN1O94822 1766 aa16.75■□□□□ 0.27
PCCB-211ENST00000473073 ZBTB7CA1YPR0 619 aa16.75■□□□□ 0.27
PCCB-211ENST00000473073 TNS3Q68CZ2 1445 aa16.75■□□□□ 0.27
PCCB-211ENST00000473073 SBNO1A3KN83 1393 aa16.75■□□□□ 0.27
PCCB-211ENST00000473073 ROBO1Q9Y6N7 1651 aa16.75■□□□□ 0.27
PCCB-211ENST00000473073 NUDCQ9Y266 331 aa16.75■□□□□ 0.27
PCCB-211ENST00000473073 MED1Q15648 1581 aaPredicted RBP16.74■□□□□ 0.27
PCCB-211ENST00000473073 IL13P35225 146 aa16.74■□□□□ 0.27
PCCB-211ENST00000473073 AMPHP49418 695 aa16.74■□□□□ 0.27
PCCB-211ENST00000473073 SLIT3O75094 1523 aa16.74■□□□□ 0.27
PCCB-211ENST00000473073 NHSL1Q5SYE7 1610 aa16.74■□□□□ 0.27
PCCB-211ENST00000473073 SPATA31A3Q5VYP0 1347 aa16.73■□□□□ 0.27
PCCB-211ENST00000473073 CABLES1Q8TDN4 633 aa16.73■□□□□ 0.27
PCCB-211ENST00000473073 FLT4P35916 1363 aa16.73■□□□□ 0.27
PCCB-211ENST00000473073 USP19O94966 1318 aa16.72■□□□□ 0.27
PCCB-211ENST00000473073 APAF1O14727 1248 aa16.72■□□□□ 0.27
PCCB-211ENST00000473073 GCP02774 474 aa16.72■□□□□ 0.27
PCCB-211ENST00000473073 EIF4A2Q14240 407 aaKnown RBP16.72■□□□□ 0.27
PCCB-211ENST00000473073 SOS2Q07890 1332 aaPredicted RBP16.72■□□□□ 0.27
PCCB-211ENST00000473073 HMOX1P09601 288 aa16.71■□□□□ 0.27
PCCB-211ENST00000473073 HOXC9P31274 260 aa16.71■□□□□ 0.27
PCCB-211ENST00000473073 PHRF1Q9P1Y6 1649 aaKnown RBP16.71■□□□□ 0.26
PCCB-211ENST00000473073 KCNH5Q8NCM2 988 aa16.7■□□□□ 0.26
PCCB-211ENST00000473073 RRP7AQ9Y3A4 280 aaKnown RBP16.69■□□□□ 0.26
PCCB-211ENST00000473073 ZC3H6P61129 1189 aaKnown RBP16.69■□□□□ 0.26
PCCB-211ENST00000473073 RUNDC1Q96C34 613 aa16.69■□□□□ 0.26
PCCB-211ENST00000473073 LTV1Q96GA3 475 aaPredicted RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms