RNA–Protein interactions for RNA: ENST00000472648.1

SIK3-208, Transcript of SIK family kinase 3, humanhuman

TSL 3

Gene SIK3, Length 267 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-208ENST00000472648 SPATA31A7Q8IWB4 1347 aa9.09□□□□□ -0.95
SIK3-208ENST00000472648 PHRF1Q9P1Y6 1649 aaKnown RBP9.09□□□□□ -0.95
SIK3-208ENST00000472648 SHANK3Q9BYB0 1731 aa9.08□□□□□ -0.96
SIK3-208ENST00000472648 PARP4Q9UKK3 1724 aaKnown RBP9.08□□□□□ -0.96
SIK3-208ENST00000472648 VGFO15240 615 aaPredicted RBP9.08□□□□□ -0.96
SIK3-208ENST00000472648 FAM50AQ14320 339 aaKnown RBP9.08□□□□□ -0.96
SIK3-208ENST00000472648 SBNO1A3KN83 1393 aa9.08□□□□□ -0.96
SIK3-208ENST00000472648 NRXN1Q9ULB1 1477 aa9.07□□□□□ -0.96
SIK3-208ENST00000472648 GOLGB1Q14789 3259 aaKnown RBP9.07□□□□□ -0.96
SIK3-208ENST00000472648 APLP2Q06481 763 aa9.06□□□□□ -0.96
SIK3-208ENST00000472648 WNK3Q9BYP7 1800 aa9.05□□□□□ -0.96
SIK3-208ENST00000472648 PHF8Q9UPP1 1060 aa9.05□□□□□ -0.96
SIK3-208ENST00000472648 TECPR2O15040 1411 aa9.05□□□□□ -0.96
SIK3-208ENST00000472648 PDE3BQ13370 1112 aa9.04□□□□□ -0.96
SIK3-208ENST00000472648 ITSN1Q15811 1721 aa9.04□□□□□ -0.96
SIK3-208ENST00000472648 PEAK1Q9H792 1746 aa9.04□□□□□ -0.96
SIK3-208ENST00000472648 SPATA31A1Q5TZJ5 1347 aa9.04□□□□□ -0.96
SIK3-208ENST00000472648 TOPAZ1Q8N9V7 1692 aa9.04□□□□□ -0.96
SIK3-208ENST00000472648 ROCK1Q13464 1354 aa9.03□□□□□ -0.96
SIK3-208ENST00000472648 ZBTB7AO95365 584 aa9.03□□□□□ -0.96
SIK3-208ENST00000472648 SYT17Q9BSW7 474 aa9.03□□□□□ -0.96
SIK3-208ENST00000472648 FHDC1Q9C0D6 1143 aaPredicted RBP9.03□□□□□ -0.96
SIK3-208ENST00000472648 WAPLQ7Z5K2 1190 aa9.02□□□□□ -0.97
SIK3-208ENST00000472648 STK26Q9P289 416 aa9.02□□□□□ -0.97
SIK3-208ENST00000472648 LRRC37A3O60309 1634 aa9.02□□□□□ -0.97
SIK3-208ENST00000472648 PLEKHH1Q9ULM0 1364 aa9.01□□□□□ -0.97
SIK3-208ENST00000472648 PTGER2P43116 358 aa9.01□□□□□ -0.97
SIK3-208ENST00000472648 PRDM11Q9NQV5 511 aa9.01□□□□□ -0.97
SIK3-208ENST00000472648 ATF5Q9Y2D1 282 aaPredicted RBP9.01□□□□□ -0.97
SIK3-208ENST00000472648 GPR162Q16538 588 aa9□□□□□ -0.97
SIK3-208ENST00000472648 ANO8Q9HCE9 1232 aaPredicted RBP9□□□□□ -0.97
SIK3-208ENST00000472648 STRN4Q9NRL3 753 aa9□□□□□ -0.97
SIK3-208ENST00000472648 USP35Q9P2H5 1018 aa9□□□□□ -0.97
SIK3-208ENST00000472648 RPGRIP1LQ68CZ1 1315 aa9□□□□□ -0.97
SIK3-208ENST00000472648 PDGFDQ9GZP0 370 aaPredicted RBP8.99□□□□□ -0.97
SIK3-208ENST00000472648 QSER1Q2KHR3 1735 aa8.99□□□□□ -0.97
SIK3-208ENST00000472648 ABCC11Q96J66 1382 aa8.99□□□□□ -0.97
SIK3-208ENST00000472648 OVOS2A0A0G2JMS6 1433 aa8.98□□□□□ -0.97
SIK3-208ENST00000472648 OVOS2A0A0J9YW53 1432 aa8.98□□□□□ -0.97
SIK3-208ENST00000472648 OVOS2Q6IE36 1432 aa8.98□□□□□ -0.97
SIK3-208ENST00000472648 LMO7Q8WWI1 1683 aa8.98□□□□□ -0.97
SIK3-208ENST00000472648 C11orf95C9JLR9 678 aaPredicted RBP8.98□□□□□ -0.97
SIK3-208ENST00000472648 BCL11BQ9C0K0 894 aaPredicted RBP8.98□□□□□ -0.97
SIK3-208ENST00000472648 KAT6BQ8WYB5 2073 aa8.98□□□□□ -0.97
SIK3-208ENST00000472648 GPRASP1Q5JY77 1395 aa8.98□□□□□ -0.97
SIK3-208ENST00000472648 SSH2Q76I76 1423 aa8.97□□□□□ -0.97
SIK3-208ENST00000472648 ANKARQ7Z5J8 1434 aa8.97□□□□□ -0.97
SIK3-208ENST00000472648 COL24A1Q17RW2 1714 aa8.97□□□□□ -0.97
SIK3-208ENST00000472648 BARGINQ6ZT62 677 aa8.97□□□□□ -0.97
SIK3-208ENST00000472648 PMFBP1Q8TBY8 1022 aa8.97□□□□□ -0.97
SIK3-208ENST00000472648 MTFR1LQ9H019 292 aa8.97□□□□□ -0.97
SIK3-208ENST00000472648 KIAA0232Q92628 1395 aa8.97□□□□□ -0.97
SIK3-208ENST00000472648 MAP3K5Q99683 1374 aa8.97□□□□□ -0.97
SIK3-208ENST00000472648 YTHDC2Q9H6S0 1430 aaKnown RBP8.97□□□□□ -0.97
SIK3-208ENST00000472648 PLSCR1O15162 318 aa8.96□□□□□ -0.98
SIK3-208ENST00000472648 HSPA6P17066 643 aa8.96□□□□□ -0.98
SIK3-208ENST00000472648 EVA1CP58658 441 aa8.96□□□□□ -0.98
SIK3-208ENST00000472648 PELP1Q8IZL8 1130 aaKnown RBP8.96□□□□□ -0.98
SIK3-208ENST00000472648 STK32BQ9NY57 414 aa8.96□□□□□ -0.98
SIK3-208ENST00000472648 TUBGCP6Q96RT7 1819 aa8.96□□□□□ -0.98
SIK3-208ENST00000472648 ATP7BP35670 1465 aa8.96□□□□□ -0.98
SIK3-208ENST00000472648 CHRNA2Q15822 529 aa8.95□□□□□ -0.98
SIK3-208ENST00000472648 ARXQ96QS3 562 aa8.95□□□□□ -0.98
SIK3-208ENST00000472648 WDR90Q96KV7 1748 aa8.94□□□□□ -0.98
SIK3-208ENST00000472648 CAPN15O75808 1086 aa8.94□□□□□ -0.98
SIK3-208ENST00000472648 PAK3O75914 559 aaPredicted RBP8.94□□□□□ -0.98
SIK3-208ENST00000472648 TMEM132EQ6IEE7 984 aa8.94□□□□□ -0.98
SIK3-208ENST00000472648 TCP11L2Q8N4U5 519 aa8.94□□□□□ -0.98
SIK3-208ENST00000472648 NHSQ6T4R5 1651 aa8.94□□□□□ -0.98
SIK3-208ENST00000472648 KLHL34Q8N239 644 aa8.93□□□□□ -0.98
SIK3-208ENST00000472648 SGIP1Q9BQI5 828 aa8.93□□□□□ -0.98
SIK3-208ENST00000472648 ADGRF5Q8IZF2 1346 aa8.93□□□□□ -0.98
SIK3-208ENST00000472648 ATP10DQ9P241 1426 aa8.93□□□□□ -0.98
SIK3-208ENST00000472648 TULP4Q9NRJ4 1543 aa8.93□□□□□ -0.98
SIK3-208ENST00000472648 PAPPAQ13219 1627 aa8.93□□□□□ -0.98
SIK3-208ENST00000472648 RGPD5Q99666 1765 aa8.93□□□□□ -0.98
SIK3-208ENST00000472648 BTAF1O14981 1849 aa8.93□□□□□ -0.98
SIK3-208ENST00000472648 PIK3C2GO75747 1445 aa8.92□□□□□ -0.98
SIK3-208ENST00000472648 DHX57Q6P158 1386 aaKnown RBP8.92□□□□□ -0.98
SIK3-208ENST00000472648 ACIN1Q9UKV3 1341 aaKnown RBP8.92□□□□□ -0.98
SIK3-208ENST00000472648 SLC15A2Q16348 729 aa8.92□□□□□ -0.98
SIK3-208ENST00000472648 THRAP3Q9Y2W1 955 aaKnown RBP8.92□□□□□ -0.98
SIK3-208ENST00000472648 EIF3AQ14152 1382 aaKnown RBP8.91□□□□□ -0.98
SIK3-208ENST00000472648 ITGAEP38570 1179 aa8.91□□□□□ -0.98
SIK3-208ENST00000472648 ZC3H6P61129 1189 aaKnown RBP8.91□□□□□ -0.98
SIK3-208ENST00000472648 SAFB2Q14151 953 aaKnown RBP eCLIP8.91□□□□□ -0.98
SIK3-208ENST00000472648 LARP1Q6PKG0 1096 aaKnown RBP8.91□□□□□ -0.98
SIK3-208ENST00000472648 GPBP1L1Q9HC44 474 aaPredicted RBP8.91□□□□□ -0.98
SIK3-208ENST00000472648 ANKRD30BQ9BXX2 1392 aa8.9□□□□□ -0.98
SIK3-208ENST00000472648 NGDNQ8NEJ9 315 aaKnown RBP8.9□□□□□ -0.98
SIK3-208ENST00000472648 SIRT1Q96EB6 747 aa8.9□□□□□ -0.98
SIK3-208ENST00000472648 ARHGEF28Q8N1W1 1705 aaKnown RBP8.9□□□□□ -0.98
SIK3-208ENST00000472648 PIK3C2AO00443 1686 aa8.9□□□□□ -0.98
SIK3-208ENST00000472648 COL5A2P05997 1499 aaPredicted RBP8.89□□□□□ -0.99
SIK3-208ENST00000472648 TXNRD1Q16881 649 aa8.89□□□□□ -0.99
SIK3-208ENST00000472648 PROM2Q8N271 834 aa8.89□□□□□ -0.99
SIK3-208ENST00000472648 DDB1Q16531 1140 aa8.88□□□□□ -0.99
SIK3-208ENST00000472648 PRAM1Q96QH2 718 aa8.88□□□□□ -0.99
SIK3-208ENST00000472648 POGKQ9P215 609 aa8.88□□□□□ -0.99
SIK3-208ENST00000472648 CRB1P82279 1406 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms