RNA–Protein interactions for RNA: ENST00000472608.5

ABCF3-209, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 657 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-209ENST00000472608 TRPM3Q9HCF6 1732 aaPredicted RBP20.75■□□□□ 0.91
ABCF3-209ENST00000472608 DHX57Q6P158 1386 aaKnown RBP20.74■□□□□ 0.91
ABCF3-209ENST00000472608 PMFBP1Q8TBY8 1022 aa20.74■□□□□ 0.91
ABCF3-209ENST00000472608 FAM196AQ6ZSG2 479 aa20.73■□□□□ 0.91
ABCF3-209ENST00000472608 STAC3Q96MF2 364 aa20.73■□□□□ 0.91
ABCF3-209ENST00000472608 ALS2Q96Q42 1657 aa20.73■□□□□ 0.91
ABCF3-209ENST00000472608 ADGRB2O60241 1585 aa20.72■□□□□ 0.91
ABCF3-209ENST00000472608 PRAM1Q96QH2 718 aa20.72■□□□□ 0.91
ABCF3-209ENST00000472608 TRIM37O94972 964 aa20.71■□□□□ 0.91
ABCF3-209ENST00000472608 SPATA31A1Q5TZJ5 1347 aa20.71■□□□□ 0.91
ABCF3-209ENST00000472608 DLC1Q96QB1 1528 aa20.69■□□□□ 0.9
ABCF3-209ENST00000472608 CFAP70Q5T0N1 1121 aa20.69■□□□□ 0.9
ABCF3-209ENST00000472608 GPRASP1Q5JY77 1395 aa20.69■□□□□ 0.9
ABCF3-209ENST00000472608 CRYBG1Q9Y4K1 1723 aa20.68■□□□□ 0.9
ABCF3-209ENST00000472608 APBA3O96018 575 aa20.68■□□□□ 0.9
ABCF3-209ENST00000472608 SAFB2Q14151 953 aaKnown RBP eCLIP20.67■□□□□ 0.9
ABCF3-209ENST00000472608 PRDM11Q9NQV5 511 aa20.66■□□□□ 0.9
ABCF3-209ENST00000472608 RREB1Q92766 1687 aa20.66■□□□□ 0.9
ABCF3-209ENST00000472608 PRR36Q9H6K5 1346 aa20.65■□□□□ 0.9
ABCF3-209ENST00000472608 EIF3AQ14152 1382 aaKnown RBP20.63■□□□□ 0.89
ABCF3-209ENST00000472608 NINLQ9Y2I6 1382 aa20.63■□□□□ 0.89
ABCF3-209ENST00000472608 NBPF8Q3BBV2 869 aa20.63■□□□□ 0.89
ABCF3-209ENST00000472608 NBPF14Q5TI25 921 aa20.63■□□□□ 0.89
ABCF3-209ENST00000472608 BARGINQ6ZT62 677 aa20.63■□□□□ 0.89
ABCF3-209ENST00000472608 POGKQ9P215 609 aa20.63■□□□□ 0.89
ABCF3-209ENST00000472608 SPON1Q9HCB6 807 aa20.62■□□□□ 0.89
ABCF3-209ENST00000472608 NUP188Q5SRE5 1749 aa20.61■□□□□ 0.89
ABCF3-209ENST00000472608 KIAA0232Q92628 1395 aa20.61■□□□□ 0.89
ABCF3-209ENST00000472608 TULP4Q9NRJ4 1543 aa20.6■□□□□ 0.89
ABCF3-209ENST00000472608 KCNQ2O43526 872 aa20.6■□□□□ 0.89
ABCF3-209ENST00000472608 DCAF11Q8TEB1 546 aa20.6■□□□□ 0.89
ABCF3-209ENST00000472608 WASLO00401 505 aaPredicted RBP20.58■□□□□ 0.89
ABCF3-209ENST00000472608 PDE3BQ13370 1112 aa20.58■□□□□ 0.89
ABCF3-209ENST00000472608 SIN3AQ96ST3 1273 aa20.58■□□□□ 0.89
ABCF3-209ENST00000472608 ADGRB1O14514 1584 aa20.58■□□□□ 0.88
ABCF3-209ENST00000472608 CHRNA2Q15822 529 aa20.57■□□□□ 0.88
ABCF3-209ENST00000472608 NGDNQ8NEJ9 315 aaKnown RBP20.57■□□□□ 0.88
ABCF3-209ENST00000472608 HIRIP3Q9BW71 556 aaPredicted RBP20.57■□□□□ 0.88
ABCF3-209ENST00000472608 STRN4Q9NRL3 753 aa20.57■□□□□ 0.88
ABCF3-209ENST00000472608 DCAF8L1A6NGE4 600 aa20.56■□□□□ 0.88
ABCF3-209ENST00000472608 PAK3O75914 559 aaPredicted RBP20.56■□□□□ 0.88
ABCF3-209ENST00000472608 PPP1R1BQ9UD71 204 aaPredicted RBP20.56■□□□□ 0.88
ABCF3-209ENST00000472608 CLSPNQ9HAW4 1339 aa20.55■□□□□ 0.88
ABCF3-209ENST00000472608 SSH2Q76I76 1423 aa20.55■□□□□ 0.88
ABCF3-209ENST00000472608 MINK1Q8N4C8 1332 aaPredicted RBP20.54■□□□□ 0.88
ABCF3-209ENST00000472608 KDM2AQ9Y2K7 1162 aa20.54■□□□□ 0.88
ABCF3-209ENST00000472608 UTRNP46939 3433 aa20.54■□□□□ 0.88
ABCF3-209ENST00000472608 C11orf95C9JLR9 678 aaPredicted RBP20.53■□□□□ 0.88
ABCF3-209ENST00000472608 NEUROD1Q13562 356 aa20.53■□□□□ 0.88
ABCF3-209ENST00000472608 TRAK1Q9UPV9 953 aa20.53■□□□□ 0.88
ABCF3-209ENST00000472608 PHRF1Q9P1Y6 1649 aaKnown RBP20.53■□□□□ 0.88
ABCF3-209ENST00000472608 ATP7BP35670 1465 aa20.52■□□□□ 0.88
ABCF3-209ENST00000472608 ZC3H6P61129 1189 aaKnown RBP20.52■□□□□ 0.88
ABCF3-209ENST00000472608 TCP11L2Q8N4U5 519 aa20.52■□□□□ 0.88
ABCF3-209ENST00000472608 THRAP3Q9Y2W1 955 aaKnown RBP20.52■□□□□ 0.88
ABCF3-209ENST00000472608 L3MBTL2Q969R5 705 aa20.51■□□□□ 0.87
ABCF3-209ENST00000472608 USP35Q9P2H5 1018 aa20.51■□□□□ 0.87
ABCF3-209ENST00000472608 EVA1CP58658 441 aa20.5■□□□□ 0.87
ABCF3-209ENST00000472608 LARP1Q6PKG0 1096 aaKnown RBP20.5■□□□□ 0.87
ABCF3-209ENST00000472608 CAMTA1Q9Y6Y1 1673 aa20.5■□□□□ 0.87
ABCF3-209ENST00000472608 CPDO75976 1380 aa20.49■□□□□ 0.87
ABCF3-209ENST00000472608 PLSCR1O15162 318 aa20.49■□□□□ 0.87
ABCF3-209ENST00000472608 NUDT16Q96DE0 195 aaKnown RBP20.48■□□□□ 0.87
ABCF3-209ENST00000472608 ZNF784Q8NCA9 323 aaPredicted RBP20.47■□□□□ 0.87
ABCF3-209ENST00000472608 LMO7Q8WWI1 1683 aa20.47■□□□□ 0.87
ABCF3-209ENST00000472608 POLR3AO14802 1390 aaPredicted RBP20.46■□□□□ 0.87
ABCF3-209ENST00000472608 RGPD3A6NKT7 1758 aaPredicted RBP20.46■□□□□ 0.87
ABCF3-209ENST00000472608 RGPD4Q7Z3J3 1758 aa20.46■□□□□ 0.87
ABCF3-209ENST00000472608 PARP4Q9UKK3 1724 aaKnown RBP20.45■□□□□ 0.86
ABCF3-209ENST00000472608 CASZ1Q86V15 1759 aa20.44■□□□□ 0.86
ABCF3-209ENST00000472608 NRKQ7Z2Y5 1582 aa20.44■□□□□ 0.86
ABCF3-209ENST00000472608 ANO8Q9HCE9 1232 aaPredicted RBP20.44■□□□□ 0.86
ABCF3-209ENST00000472608 USP19O94966 1318 aa20.44■□□□□ 0.86
ABCF3-209ENST00000472608 ITSN1Q15811 1721 aa20.44■□□□□ 0.86
ABCF3-209ENST00000472608 PEAK1Q9H792 1746 aa20.44■□□□□ 0.86
ABCF3-209ENST00000472608 NUTM2GQ5VZR2 741 aa20.43■□□□□ 0.86
ABCF3-209ENST00000472608 TONSLQ96HA7 1378 aa20.43■□□□□ 0.86
ABCF3-209ENST00000472608 OVOS2A0A0G2JMS6 1433 aa20.43■□□□□ 0.86
ABCF3-209ENST00000472608 OVOS2A0A0J9YW53 1432 aa20.43■□□□□ 0.86
ABCF3-209ENST00000472608 OVOS2Q6IE36 1432 aa20.43■□□□□ 0.86
ABCF3-209ENST00000472608 KIAA1210Q9ULL0 1709 aa20.42■□□□□ 0.86
ABCF3-209ENST00000472608 PTGER2P43116 358 aa20.42■□□□□ 0.86
ABCF3-209ENST00000472608 TIMELESSQ9UNS1 1208 aa20.42■□□□□ 0.86
ABCF3-209ENST00000472608 PLEKHG3A1L390 1219 aa20.41■□□□□ 0.86
ABCF3-209ENST00000472608 ACEP12821 1306 aa20.41■□□□□ 0.86
ABCF3-209ENST00000472608 COL5A2P05997 1499 aaPredicted RBP20.4■□□□□ 0.86
ABCF3-209ENST00000472608 PROM2Q8N271 834 aa20.4■□□□□ 0.86
ABCF3-209ENST00000472608 BCL11BQ9C0K0 894 aaPredicted RBP20.4■□□□□ 0.86
ABCF3-209ENST00000472608 PDGFDQ9GZP0 370 aaPredicted RBP20.4■□□□□ 0.86
ABCF3-209ENST00000472608 CCER1Q8TC90 406 aaPredicted RBP20.39■□□□□ 0.85
ABCF3-209ENST00000472608 CCDC61Q9Y6R9 512 aa20.39■□□□□ 0.85
ABCF3-209ENST00000472608 BCL9O00512 1426 aa20.38■□□□□ 0.85
ABCF3-209ENST00000472608 CRB1P82279 1406 aa20.38■□□□□ 0.85
ABCF3-209ENST00000472608 GCP02774 474 aa20.38■□□□□ 0.85
ABCF3-209ENST00000472608 ABTB2Q8N961 1025 aa20.38■□□□□ 0.85
ABCF3-209ENST00000472608 CDK19Q9BWU1 502 aa20.38■□□□□ 0.85
ABCF3-209ENST00000472608 SBF2Q86WG5 1849 aa20.37■□□□□ 0.85
ABCF3-209ENST00000472608 TOPAZ1Q8N9V7 1692 aa20.35■□□□□ 0.85
ABCF3-209ENST00000472608 ZBTB7AO95365 584 aa20.35■□□□□ 0.85
ABCF3-209ENST00000472608 C1QTNF8P60827 252 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms