RNA–Protein interactions for RNA: ENST00000472397.5

SCAMP3-205, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 3

Gene SCAMP3, Length 1,030 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-205ENST00000472397 USP35Q9P2H5 1018 aa14.86□□□□□ -0.03
SCAMP3-205ENST00000472397 BAG6P46379 1132 aa14.84□□□□□ -0.03
SCAMP3-205ENST00000472397 PRDM11Q9NQV5 511 aa14.84□□□□□ -0.03
SCAMP3-205ENST00000472397 ANKARQ7Z5J8 1434 aa14.83□□□□□ -0.03
SCAMP3-205ENST00000472397 ADGRB1O14514 1584 aa14.83□□□□□ -0.04
SCAMP3-205ENST00000472397 R3HDM1Q15032 1099 aaKnown RBP14.83□□□□□ -0.04
SCAMP3-205ENST00000472397 NRAPQ86VF7 1730 aa14.83□□□□□ -0.04
SCAMP3-205ENST00000472397 TRPM3Q9HCF6 1732 aaPredicted RBP14.83□□□□□ -0.04
SCAMP3-205ENST00000472397 NWD2Q9ULI1 1742 aa14.83□□□□□ -0.04
SCAMP3-205ENST00000472397 ZBTB7CA1YPR0 619 aa14.82□□□□□ -0.04
SCAMP3-205ENST00000472397 EZH2Q15910 746 aaKnown RBP14.82□□□□□ -0.04
SCAMP3-205ENST00000472397 NUDT16Q96DE0 195 aaKnown RBP14.82□□□□□ -0.04
SCAMP3-205ENST00000472397 SPATA31A5Q5VU36 1347 aa14.82□□□□□ -0.04
SCAMP3-205ENST00000472397 SPATA31A7Q8IWB4 1347 aa14.82□□□□□ -0.04
SCAMP3-205ENST00000472397 DLC1Q96QB1 1528 aa14.82□□□□□ -0.04
SCAMP3-205ENST00000472397 TRIM37O94972 964 aa14.81□□□□□ -0.04
SCAMP3-205ENST00000472397 HRCP23327 699 aa14.81□□□□□ -0.04
SCAMP3-205ENST00000472397 CDK19Q9BWU1 502 aa14.81□□□□□ -0.04
SCAMP3-205ENST00000472397 KIAA0232Q92628 1395 aa14.81□□□□□ -0.04
SCAMP3-205ENST00000472397 ALS2Q96Q42 1657 aa14.79□□□□□ -0.04
SCAMP3-205ENST00000472397 TULP4Q9NRJ4 1543 aa14.79□□□□□ -0.04
SCAMP3-205ENST00000472397 COL14A1Q05707 1796 aaKnown RBP14.78□□□□□ -0.04
SCAMP3-205ENST00000472397 ADGRB2O60241 1585 aa14.78□□□□□ -0.04
SCAMP3-205ENST00000472397 EVA1CP58658 441 aa14.78□□□□□ -0.04
SCAMP3-205ENST00000472397 ACEP12821 1306 aa14.76□□□□□ -0.05
SCAMP3-205ENST00000472397 SPATA31A1Q5TZJ5 1347 aa14.76□□□□□ -0.05
SCAMP3-205ENST00000472397 APBA3O96018 575 aa14.76□□□□□ -0.05
SCAMP3-205ENST00000472397 NBPF1Q3BBV0 1214 aa14.76□□□□□ -0.05
SCAMP3-205ENST00000472397 LARP1Q6PKG0 1096 aaKnown RBP14.76□□□□□ -0.05
SCAMP3-205ENST00000472397 EIF3AQ14152 1382 aaKnown RBP14.74□□□□□ -0.05
SCAMP3-205ENST00000472397 NBPF8Q3BBV2 869 aa14.74□□□□□ -0.05
SCAMP3-205ENST00000472397 ABTB2Q8N961 1025 aa14.74□□□□□ -0.05
SCAMP3-205ENST00000472397 ATP7BP35670 1465 aa14.74□□□□□ -0.05
SCAMP3-205ENST00000472397 CRYBG1Q9Y4K1 1723 aa14.73□□□□□ -0.05
SCAMP3-205ENST00000472397 CABP2Q9NPB3 220 aa14.73□□□□□ -0.05
SCAMP3-205ENST00000472397 ARHGEF28Q8N1W1 1705 aaKnown RBP14.72□□□□□ -0.05
SCAMP3-205ENST00000472397 THSD7AQ9UPZ6 1657 aa14.71□□□□□ -0.05
SCAMP3-205ENST00000472397 SRPK2P78362 688 aaKnown RBP14.71□□□□□ -0.05
SCAMP3-205ENST00000472397 PDE3BQ13370 1112 aa14.71□□□□□ -0.05
SCAMP3-205ENST00000472397 CAMKK2Q96RR4 588 aa14.71□□□□□ -0.05
SCAMP3-205ENST00000472397 RGPD1P0DJD0 1748 aa14.71□□□□□ -0.05
SCAMP3-205ENST00000472397 PHRF1Q9P1Y6 1649 aaKnown RBP14.7□□□□□ -0.06
SCAMP3-205ENST00000472397 TNS1Q9HBL0 1735 aaKnown RBP14.69□□□□□ -0.06
SCAMP3-205ENST00000472397 SSH2Q76I76 1423 aa14.69□□□□□ -0.06
SCAMP3-205ENST00000472397 SOX12O15370 315 aa14.69□□□□□ -0.06
SCAMP3-205ENST00000472397 FAM196AQ6ZSG2 479 aa14.69□□□□□ -0.06
SCAMP3-205ENST00000472397 LRP5O75197 1615 aa14.69□□□□□ -0.06
SCAMP3-205ENST00000472397 CAMTA1Q9Y6Y1 1673 aa14.68□□□□□ -0.06
SCAMP3-205ENST00000472397 CCDC61Q9Y6R9 512 aa14.68□□□□□ -0.06
SCAMP3-205ENST00000472397 PLEKHG3A1L390 1219 aa14.66□□□□□ -0.06
SCAMP3-205ENST00000472397 PTF1AQ7RTS3 328 aa14.66□□□□□ -0.06
SCAMP3-205ENST00000472397 TCP11L2Q8N4U5 519 aa14.66□□□□□ -0.06
SCAMP3-205ENST00000472397 ITSN1Q15811 1721 aa14.66□□□□□ -0.06
SCAMP3-205ENST00000472397 PPIP5K1Q6PFW1 1433 aa14.66□□□□□ -0.06
SCAMP3-205ENST00000472397 POLR3AO14802 1390 aaPredicted RBP14.65□□□□□ -0.06
SCAMP3-205ENST00000472397 GCP02774 474 aa14.65□□□□□ -0.06
SCAMP3-205ENST00000472397 CABP1Q9NZU7 370 aa14.65□□□□□ -0.06
SCAMP3-205ENST00000472397 NRKQ7Z2Y5 1582 aa14.64□□□□□ -0.07
SCAMP3-205ENST00000472397 NLRP6P59044 892 aa14.64□□□□□ -0.07
SCAMP3-205ENST00000472397 BARGINQ6ZT62 677 aa14.63□□□□□ -0.07
SCAMP3-205ENST00000472397 NLRP13Q86W25 1043 aa14.63□□□□□ -0.07
SCAMP3-205ENST00000472397 CENPJQ9HC77 1338 aaPredicted RBP14.63□□□□□ -0.07
SCAMP3-205ENST00000472397 TOPAZ1Q8N9V7 1692 aa14.62□□□□□ -0.07
SCAMP3-205ENST00000472397 USP19O94966 1318 aa14.62□□□□□ -0.07
SCAMP3-205ENST00000472397 DISP2A7MBM2 1401 aa14.61□□□□□ -0.07
SCAMP3-205ENST00000472397 NBPF14Q5TI25 921 aa14.61□□□□□ -0.07
SCAMP3-205ENST00000472397 TOM1L2Q6ZVM7 507 aa14.61□□□□□ -0.07
SCAMP3-205ENST00000472397 STAC3Q96MF2 364 aa14.61□□□□□ -0.07
SCAMP3-205ENST00000472397 SIN3AQ96ST3 1273 aa14.61□□□□□ -0.07
SCAMP3-205ENST00000472397 NEUROD1Q13562 356 aa14.6□□□□□ -0.07
SCAMP3-205ENST00000472397 PDGFDQ9GZP0 370 aaPredicted RBP14.6□□□□□ -0.07
SCAMP3-205ENST00000472397 PPP1R1BQ9UD71 204 aaPredicted RBP14.6□□□□□ -0.07
SCAMP3-205ENST00000472397 AXIN2Q9Y2T1 843 aa14.6□□□□□ -0.07
SCAMP3-205ENST00000472397 COL5A2P05997 1499 aaPredicted RBP14.59□□□□□ -0.07
SCAMP3-205ENST00000472397 LMO7Q8WWI1 1683 aa14.58□□□□□ -0.07
SCAMP3-205ENST00000472397 NUP188Q5SRE5 1749 aa14.58□□□□□ -0.07
SCAMP3-205ENST00000472397 L3MBTL2Q969R5 705 aa14.58□□□□□ -0.08
SCAMP3-205ENST00000472397 CPDO75976 1380 aa14.58□□□□□ -0.08
SCAMP3-205ENST00000472397 CSB-PGBD3P0DP91 1061 aa14.57□□□□□ -0.08
SCAMP3-205ENST00000472397 ANO8Q9HCE9 1232 aaPredicted RBP14.57□□□□□ -0.08
SCAMP3-205ENST00000472397 QRICH2Q9H0J4 1663 aa14.56□□□□□ -0.08
SCAMP3-205ENST00000472397 DDB1Q16531 1140 aa14.56□□□□□ -0.08
SCAMP3-205ENST00000472397 MARCH10Q8NA82 808 aaPredicted RBP14.56□□□□□ -0.08
SCAMP3-205ENST00000472397 CRB1P82279 1406 aa14.56□□□□□ -0.08
SCAMP3-205ENST00000472397 RREB1Q92766 1687 aa14.55□□□□□ -0.08
SCAMP3-205ENST00000472397 ZBTB7AO95365 584 aa14.55□□□□□ -0.08
SCAMP3-205ENST00000472397 YY1P25490 414 aa14.55□□□□□ -0.08
SCAMP3-205ENST00000472397 BCL11BQ9C0K0 894 aaPredicted RBP14.55□□□□□ -0.08
SCAMP3-205ENST00000472397 THRAP3Q9Y2W1 955 aaKnown RBP14.55□□□□□ -0.08
SCAMP3-205ENST00000472397 USP6P35125 1406 aa14.55□□□□□ -0.08
SCAMP3-205ENST00000472397 KCNQ2O43526 872 aa14.54□□□□□ -0.08
SCAMP3-205ENST00000472397 SPON1Q9HCB6 807 aa14.54□□□□□ -0.08
SCAMP3-205ENST00000472397 ATF5Q9Y2D1 282 aaPredicted RBP14.54□□□□□ -0.08
SCAMP3-205ENST00000472397 KIAA1210Q9ULL0 1709 aa14.53□□□□□ -0.08
SCAMP3-205ENST00000472397 PARD3Q8TEW0 1356 aa14.53□□□□□ -0.08
SCAMP3-205ENST00000472397 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.53□□□□□ -0.08
SCAMP3-205ENST00000472397 OVOS2A0A0G2JMS6 1433 aa14.52□□□□□ -0.08
SCAMP3-205ENST00000472397 OVOS2A0A0J9YW53 1432 aa14.52□□□□□ -0.08
SCAMP3-205ENST00000472397 OVOS2Q6IE36 1432 aa14.52□□□□□ -0.08
SCAMP3-205ENST00000472397 TTC21BQ7Z4L5 1316 aa14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 104.8 ms