RNA–Protein interactions for RNA: ENST00000472375.5

HMGCS2-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

TSL 5

Gene HMGCS2, Length 634 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-202ENST00000472375 SLC6A16Q9GZN6 736 aa8.88□□□□□ -0.99
HMGCS2-202ENST00000472375 GLMNQ92990 594 aa8.87□□□□□ -0.99
HMGCS2-202ENST00000472375 RNF166Q96A37 237 aaPredicted RBP8.87□□□□□ -0.99
HMGCS2-202ENST00000472375 CALR3Q96L12 384 aaKnown RBP8.87□□□□□ -0.99
HMGCS2-202ENST00000472375 EVA1BQ9NVM1 165 aa8.87□□□□□ -0.99
HMGCS2-202ENST00000472375 MAP10Q9P2G4 905 aa8.87□□□□□ -0.99
HMGCS2-202ENST00000472375 CTHP32929 405 aa8.86□□□□□ -0.99
HMGCS2-202ENST00000472375 KCNH2Q12809 1159 aa8.86□□□□□ -0.99
HMGCS2-202ENST00000472375 PRDM9Q9NQV7 894 aa8.86□□□□□ -0.99
HMGCS2-202ENST00000472375 GPSM3Q9Y4H4 160 aa8.86□□□□□ -0.99
HMGCS2-202ENST00000472375 ARID3AQ99856 593 aa8.85□□□□□ -0.99
HMGCS2-202ENST00000472375 POM121CA8CG34 1229 aa8.84□□□□□ -0.99
HMGCS2-202ENST00000472375 ZBBXA8MT70 800 aa8.84□□□□□ -0.99
HMGCS2-202ENST00000472375 ITGBL1O95965 494 aaPredicted RBP8.84□□□□□ -0.99
HMGCS2-202ENST00000472375 EIF4G2P78344 907 aaKnown RBP eCLIP8.84□□□□□ -0.99
HMGCS2-202ENST00000472375 NR1H3Q13133 447 aa8.84□□□□□ -0.99
HMGCS2-202ENST00000472375 VAC14Q08AM6 782 aa8.83□□□□□ -1
HMGCS2-202ENST00000472375 ZNF516Q92618 1163 aa8.83□□□□□ -1
HMGCS2-202ENST00000472375 KCNC4Q03721 635 aa8.82□□□□□ -1
HMGCS2-202ENST00000472375 PDXDC2PQ6P474 469 aa8.82□□□□□ -1
HMGCS2-202ENST00000472375 FBXO45P0C2W1 286 aa8.8□□□□□ -1
HMGCS2-202ENST00000472375 GGCXP38435 758 aa8.8□□□□□ -1
HMGCS2-202ENST00000472375 MCCD1P59942 119 aaPredicted RBP8.8□□□□□ -1
HMGCS2-202ENST00000472375 PTK2Q05397 1052 aa8.8□□□□□ -1
HMGCS2-202ENST00000472375 SPNS2Q8IVW8 549 aa8.8□□□□□ -1
HMGCS2-202ENST00000472375 UNC93B1Q9H1C4 597 aa8.8□□□□□ -1
HMGCS2-202ENST00000472375 ALG2Q9H553 416 aa8.8□□□□□ -1
HMGCS2-202ENST00000472375 S1PR4O95977 384 aa8.79□□□□□ -1
HMGCS2-202ENST00000472375 SEMA3FQ13275 785 aa8.79□□□□□ -1
HMGCS2-202ENST00000472375 HDGFL1Q5TGJ6 251 aa8.79□□□□□ -1
HMGCS2-202ENST00000472375 CCDC24Q8N4L8 307 aa8.78□□□□□ -1
HMGCS2-202ENST00000472375 ADAMTS19Q8TE59 1207 aa8.78□□□□□ -1
HMGCS2-202ENST00000472375 FCF1Q9Y324 198 aaKnown RBP8.78□□□□□ -1
HMGCS2-202ENST00000472375 PPP1R15AO75807 674 aaPredicted RBP8.77□□□□□ -1.01
HMGCS2-202ENST00000472375 ANKLE1Q8NAG6 615 aa8.75□□□□□ -1.01
HMGCS2-202ENST00000472375 NKX2-3Q8TAU0 364 aa8.75□□□□□ -1.01
HMGCS2-202ENST00000472375 SH3BP5LQ7L8J4 393 aa8.74□□□□□ -1.01
HMGCS2-202ENST00000472375 NFATC2IPQ8NCF5 419 aa8.74□□□□□ -1.01
HMGCS2-202ENST00000472375 ARHGAP9Q9BRR9 750 aa8.74□□□□□ -1.01
HMGCS2-202ENST00000472375 BPHLQ86WA6 291 aaPredicted RBP8.73□□□□□ -1.01
HMGCS2-202ENST00000472375 PPP1R12CQ9BZL4 782 aa8.73□□□□□ -1.01
HMGCS2-202ENST00000472375 ZBTB24O43167 697 aaPredicted RBP8.72□□□□□ -1.01
HMGCS2-202ENST00000472375 SH3RF1Q7Z6J0 888 aa8.72□□□□□ -1.01
HMGCS2-202ENST00000472375 ZBTB33Q86T24 672 aa8.72□□□□□ -1.01
HMGCS2-202ENST00000472375 ZNF511Q8NB15 262 aa8.72□□□□□ -1.01
HMGCS2-202ENST00000472375 IFFO2Q5TF58 517 aa8.71□□□□□ -1.02
HMGCS2-202ENST00000472375 PTCRAQ6ISU1 281 aaPredicted RBP8.71□□□□□ -1.02
HMGCS2-202ENST00000472375 ADAM32Q8TC27 787 aa8.71□□□□□ -1.02
HMGCS2-202ENST00000472375 PBXIP1Q96AQ6 731 aa8.71□□□□□ -1.02
HMGCS2-202ENST00000472375 UCN2Q96RP3 112 aa8.71□□□□□ -1.02
HMGCS2-202ENST00000472375 PALM3A6NDB9 673 aaPredicted RBP8.7□□□□□ -1.02
HMGCS2-202ENST00000472375 RNF223E7ERA6 249 aa8.7□□□□□ -1.02
HMGCS2-202ENST00000472375 CDV3Q9UKY7 258 aaKnown RBP8.7□□□□□ -1.02
HMGCS2-202ENST00000472375 ATP9BO43861 1147 aa8.69□□□□□ -1.02
HMGCS2-202ENST00000472375 WNT7BP56706 349 aa8.69□□□□□ -1.02
HMGCS2-202ENST00000472375 CFAP70Q5T0N1 1121 aa8.69□□□□□ -1.02
HMGCS2-202ENST00000472375 OCSTAMPQ9BR26 566 aa8.69□□□□□ -1.02
HMGCS2-202ENST00000472375 PCDHB9Q9Y5E1 797 aa8.69□□□□□ -1.02
HMGCS2-202ENST00000472375 RPIAP49247 311 aa8.68□□□□□ -1.02
HMGCS2-202ENST00000472375 PDE4CQ08493 712 aa8.68□□□□□ -1.02
HMGCS2-202ENST00000472375 TRIM32Q13049 653 aa8.68□□□□□ -1.02
HMGCS2-202ENST00000472375 AGERQ15109 404 aa8.68□□□□□ -1.02
HMGCS2-202ENST00000472375 NBPF20Q3BBV1 942 aa8.68□□□□□ -1.02
HMGCS2-202ENST00000472375 CCDC125Q86Z20 511 aa8.68□□□□□ -1.02
HMGCS2-202ENST00000472375 SLC10A4Q96EP9 437 aa8.68□□□□□ -1.02
HMGCS2-202ENST00000472375 C1QTNF2Q9BXJ5 285 aa8.68□□□□□ -1.02
HMGCS2-202ENST00000472375 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.68□□□□□ -1.02
HMGCS2-202ENST00000472375 MAFBQ9Y5Q3 323 aaPredicted RBP8.68□□□□□ -1.02
HMGCS2-202ENST00000472375 MAGEB6P1A0A0J9YX57 407 aa8.67□□□□□ -1.02
HMGCS2-202ENST00000472375 MMRN1Q13201 1228 aa8.67□□□□□ -1.02
HMGCS2-202ENST00000472375 LINC01559Q495D7 138 aa8.67□□□□□ -1.02
HMGCS2-202ENST00000472375 SLFNL1Q499Z3 407 aa8.67□□□□□ -1.02
HMGCS2-202ENST00000472375 DZIP3Q86Y13 1208 aaKnown RBP8.67□□□□□ -1.02
HMGCS2-202ENST00000472375 TRMT44Q8IYL2 757 aaKnown RBP8.67□□□□□ -1.02
HMGCS2-202ENST00000472375 BAP1Q92560 729 aa8.67□□□□□ -1.02
HMGCS2-202ENST00000472375 CARD14Q9BXL6 1004 aa8.67□□□□□ -1.02
HMGCS2-202ENST00000472375 LZTS3O60299 673 aaPredicted RBP8.66□□□□□ -1.02
HMGCS2-202ENST00000472375 ERFEQ4G0M1 354 aa8.66□□□□□ -1.02
HMGCS2-202ENST00000472375 PLEKHM2Q8IWE5 1019 aa8.66□□□□□ -1.02
HMGCS2-202ENST00000472375 ACIN1Q9UKV3 1341 aaKnown RBP8.65□□□□□ -1.02
HMGCS2-202ENST00000472375 PPP1R18Q6NYC8 613 aa8.65□□□□□ -1.02
HMGCS2-202ENST00000472375 CEP126Q9P2H0 1117 aa8.65□□□□□ -1.02
HMGCS2-202ENST00000472375 TFIP11Q9UBB9 837 aaKnown RBP8.65□□□□□ -1.02
HMGCS2-202ENST00000472375 LMOD1P29536 600 aaPredicted RBP8.64□□□□□ -1.03
HMGCS2-202ENST00000472375 SH3BP2P78314 561 aa8.64□□□□□ -1.03
HMGCS2-202ENST00000472375 MAP7D1Q3KQU3 841 aa8.64□□□□□ -1.03
HMGCS2-202ENST00000472375 RNF20Q5VTR2 975 aa8.64□□□□□ -1.03
HMGCS2-202ENST00000472375 TBC1D9Q6ZT07 1266 aa8.64□□□□□ -1.03
HMGCS2-202ENST00000472375 RNF135Q8IUD6 432 aa8.64□□□□□ -1.03
HMGCS2-202ENST00000472375 SEPT12Q8IYM1 358 aa8.64□□□□□ -1.03
HMGCS2-202ENST00000472375 FOXJ1Q92949 421 aa8.64□□□□□ -1.03
HMGCS2-202ENST00000472375 USP17L5A8MUK1 530 aa8.63□□□□□ -1.03
HMGCS2-202ENST00000472375 PPEF1O14829 653 aaPredicted RBP8.63□□□□□ -1.03
HMGCS2-202ENST00000472375 VARSP26640 1264 aaKnown RBP8.63□□□□□ -1.03
HMGCS2-202ENST00000472375 FAM174AQ8TBP5 190 aa8.63□□□□□ -1.03
HMGCS2-202ENST00000472375 CHIC2Q9UKJ5 165 aa8.63□□□□□ -1.03
HMGCS2-202ENST00000472375 MAP4K5Q9Y4K4 846 aa8.63□□□□□ -1.03
HMGCS2-202ENST00000472375 USP17L3A6NCW0 530 aa8.62□□□□□ -1.03
HMGCS2-202ENST00000472375 USP17L4A6NCW7 530 aa8.62□□□□□ -1.03
HMGCS2-202ENST00000472375 CD2BP2O95400 341 aaKnown RBP8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms