RNA–Protein interactions for RNA: ENST00000472170.1

TSPAN1-205, Transcript of tetraspanin 1, humanhuman

TSL 3

Gene TSPAN1, Length 519 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-205ENST00000472170 CABP1Q9NZU7 370 aa11.79□□□□□ -0.52
TSPAN1-205ENST00000472170 SRCAPQ6ZRS2 3230 aa11.79□□□□□ -0.52
TSPAN1-205ENST00000472170 BRD4O60885 1362 aaPredicted RBP11.79□□□□□ -0.52
TSPAN1-205ENST00000472170 CDK12Q9NYV4 1490 aaPredicted RBP11.78□□□□□ -0.52
TSPAN1-205ENST00000472170 TRPM1Q7Z4N2 1603 aa11.78□□□□□ -0.52
TSPAN1-205ENST00000472170 PPIP5K1Q6PFW1 1433 aa11.77□□□□□ -0.52
TSPAN1-205ENST00000472170 EVA1CP58658 441 aa11.77□□□□□ -0.53
TSPAN1-205ENST00000472170 PRDM11Q9NQV5 511 aa11.77□□□□□ -0.53
TSPAN1-205ENST00000472170 USP32Q8NFA0 1604 aa11.77□□□□□ -0.53
TSPAN1-205ENST00000472170 MARF1Q9Y4F3 1742 aaKnown RBP11.77□□□□□ -0.53
TSPAN1-205ENST00000472170 QRICH2Q9H0J4 1663 aa11.76□□□□□ -0.53
TSPAN1-205ENST00000472170 A0A0G2JS52 829 aa11.76□□□□□ -0.53
TSPAN1-205ENST00000472170 FAM83GA6ND36 823 aa11.76□□□□□ -0.53
TSPAN1-205ENST00000472170 MYT1Q01538 1121 aa11.76□□□□□ -0.53
TSPAN1-205ENST00000472170 TMC1Q8TDI8 760 aa11.76□□□□□ -0.53
TSPAN1-205ENST00000472170 POLR3AO14802 1390 aaPredicted RBP11.76□□□□□ -0.53
TSPAN1-205ENST00000472170 ATAD2Q6PL18 1390 aa11.76□□□□□ -0.53
TSPAN1-205ENST00000472170 ATP7BP35670 1465 aa11.76□□□□□ -0.53
TSPAN1-205ENST00000472170 NLRP6P59044 892 aa11.75□□□□□ -0.53
TSPAN1-205ENST00000472170 NUTM2GQ5VZR2 741 aa11.75□□□□□ -0.53
TSPAN1-205ENST00000472170 HDGFL2Q7Z4V5 671 aaPredicted RBP11.75□□□□□ -0.53
TSPAN1-205ENST00000472170 BTG4Q9NY30 223 aa11.75□□□□□ -0.53
TSPAN1-205ENST00000472170 VPS72Q15906 364 aa11.74□□□□□ -0.53
TSPAN1-205ENST00000472170 CDCA8Q53HL2 280 aa11.74□□□□□ -0.53
TSPAN1-205ENST00000472170 PUS7Q96PZ0 661 aaKnown RBP11.74□□□□□ -0.53
TSPAN1-205ENST00000472170 TERF2IPQ9NYB0 399 aa11.74□□□□□ -0.53
TSPAN1-205ENST00000472170 ZC3H6P61129 1189 aaKnown RBP11.73□□□□□ -0.53
TSPAN1-205ENST00000472170 BCL9LQ86UU0 1499 aa11.72□□□□□ -0.53
TSPAN1-205ENST00000472170 ATRNO75882 1429 aa11.72□□□□□ -0.53
TSPAN1-205ENST00000472170 SF3B2Q13435 895 aaKnown RBP11.72□□□□□ -0.53
TSPAN1-205ENST00000472170 CCDC125Q86Z20 511 aa11.72□□□□□ -0.53
TSPAN1-205ENST00000472170 KCNH5Q8NCM2 988 aa11.72□□□□□ -0.53
TSPAN1-205ENST00000472170 RALGAPBQ86X10 1494 aa11.71□□□□□ -0.53
TSPAN1-205ENST00000472170 SBNO2Q9Y2G9 1366 aa11.71□□□□□ -0.53
TSPAN1-205ENST00000472170 ST20-MTHFSA0A0A6YYL1 179 aa11.71□□□□□ -0.53
TSPAN1-205ENST00000472170 ZBTB7CA1YPR0 619 aa11.71□□□□□ -0.53
TSPAN1-205ENST00000472170 GCP02774 474 aa11.71□□□□□ -0.53
TSPAN1-205ENST00000472170 TMF1P82094 1093 aa11.71□□□□□ -0.53
TSPAN1-205ENST00000472170 SLIT2O94813 1529 aa11.7□□□□□ -0.54
TSPAN1-205ENST00000472170 KTN1Q86UP2 1357 aaKnown RBP11.7□□□□□ -0.54
TSPAN1-205ENST00000472170 TTC21AQ8NDW8 1320 aa11.7□□□□□ -0.54
TSPAN1-205ENST00000472170 TRPM3Q9HCF6 1732 aaPredicted RBP11.7□□□□□ -0.54
TSPAN1-205ENST00000472170 STRN4Q9NRL3 753 aa11.7□□□□□ -0.54
TSPAN1-205ENST00000472170 ALS2Q96Q42 1657 aa11.7□□□□□ -0.54
TSPAN1-205ENST00000472170 NWD2Q9ULI1 1742 aa11.69□□□□□ -0.54
TSPAN1-205ENST00000472170 SEPT12Q8IYM1 358 aa11.69□□□□□ -0.54
TSPAN1-205ENST00000472170 USP6P35125 1406 aa11.69□□□□□ -0.54
TSPAN1-205ENST00000472170 KIAA0232Q92628 1395 aa11.68□□□□□ -0.54
TSPAN1-205ENST00000472170 CHRNA2Q15822 529 aa11.68□□□□□ -0.54
TSPAN1-205ENST00000472170 COL14A1Q05707 1796 aaKnown RBP11.68□□□□□ -0.54
TSPAN1-205ENST00000472170 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.68□□□□□ -0.54
TSPAN1-205ENST00000472170 TOPAZ1Q8N9V7 1692 aa11.68□□□□□ -0.54
TSPAN1-205ENST00000472170 RGS12O14924 1447 aa11.68□□□□□ -0.54
TSPAN1-205ENST00000472170 TTC21BQ7Z4L5 1316 aa11.67□□□□□ -0.54
TSPAN1-205ENST00000472170 ONECUT3O60422 494 aaPredicted RBP11.67□□□□□ -0.54
TSPAN1-205ENST00000472170 KRT27Q7Z3Y8 459 aa11.67□□□□□ -0.54
TSPAN1-205ENST00000472170 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.67□□□□□ -0.54
TSPAN1-205ENST00000472170 NINLQ9Y2I6 1382 aa11.67□□□□□ -0.54
TSPAN1-205ENST00000472170 FAM98CQ17RN3 349 aaKnown RBP11.66□□□□□ -0.54
TSPAN1-205ENST00000472170 SLC12A5Q9H2X9 1139 aa11.66□□□□□ -0.54
TSPAN1-205ENST00000472170 SPATA31A5Q5VU36 1347 aa11.65□□□□□ -0.54
TSPAN1-205ENST00000472170 SPATA31A7Q8IWB4 1347 aa11.65□□□□□ -0.54
TSPAN1-205ENST00000472170 PDE3BQ13370 1112 aa11.65□□□□□ -0.54
TSPAN1-205ENST00000472170 USP35Q9P2H5 1018 aa11.65□□□□□ -0.54
TSPAN1-205ENST00000472170 PLCH1Q4KWH8 1693 aa11.65□□□□□ -0.55
TSPAN1-205ENST00000472170 ABCA3Q99758 1704 aa11.64□□□□□ -0.55
TSPAN1-205ENST00000472170 SOX12O15370 315 aa11.64□□□□□ -0.55
TSPAN1-205ENST00000472170 CSB-PGBD3P0DP91 1061 aa11.64□□□□□ -0.55
TSPAN1-205ENST00000472170 THRAP3Q9Y2W1 955 aaKnown RBP11.64□□□□□ -0.55
TSPAN1-205ENST00000472170 CPDO75976 1380 aa11.64□□□□□ -0.55
TSPAN1-205ENST00000472170 USP47Q96K76 1375 aa11.64□□□□□ -0.55
TSPAN1-205ENST00000472170 USP19O94966 1318 aa11.63□□□□□ -0.55
TSPAN1-205ENST00000472170 C11orf95C9JLR9 678 aaPredicted RBP11.63□□□□□ -0.55
TSPAN1-205ENST00000472170 TOM1L2Q6ZVM7 507 aa11.63□□□□□ -0.55
TSPAN1-205ENST00000472170 TCP11L2Q8N4U5 519 aa11.63□□□□□ -0.55
TSPAN1-205ENST00000472170 SPATA31A1Q5TZJ5 1347 aa11.62□□□□□ -0.55
TSPAN1-205ENST00000472170 EIF4G2P78344 907 aaKnown RBP eCLIP11.62□□□□□ -0.55
TSPAN1-205ENST00000472170 COG3Q96JB2 828 aa11.62□□□□□ -0.55
TSPAN1-205ENST00000472170 TESK2Q96S53 571 aa11.62□□□□□ -0.55
TSPAN1-205ENST00000472170 CPSF1Q10570 1443 aaKnown RBP11.61□□□□□ -0.55
TSPAN1-205ENST00000472170 FAM196AQ6ZSG2 479 aa11.61□□□□□ -0.55
TSPAN1-205ENST00000472170 BARGINQ6ZT62 677 aa11.61□□□□□ -0.55
TSPAN1-205ENST00000472170 CDCA7Q9BWT1 371 aaPredicted RBP11.61□□□□□ -0.55
TSPAN1-205ENST00000472170 AATKQ6ZMQ8 1374 aa11.61□□□□□ -0.55
TSPAN1-205ENST00000472170 AKAP12Q02952 1782 aa11.6□□□□□ -0.55
TSPAN1-205ENST00000472170 LARP1Q6PKG0 1096 aaKnown RBP11.6□□□□□ -0.55
TSPAN1-205ENST00000472170 POLR3GLQ9BT43 218 aa11.6□□□□□ -0.55
TSPAN1-205ENST00000472170 ZRANB1Q9UGI0 708 aa11.6□□□□□ -0.55
TSPAN1-205ENST00000472170 PHRF1Q9P1Y6 1649 aaKnown RBP11.6□□□□□ -0.55
TSPAN1-205ENST00000472170 EDC4Q6P2E9 1401 aaKnown RBP11.6□□□□□ -0.55
TSPAN1-205ENST00000472170 GLI3P10071 1580 aa11.59□□□□□ -0.55
TSPAN1-205ENST00000472170 BAG6P46379 1132 aa11.59□□□□□ -0.55
TSPAN1-205ENST00000472170 ARHGEF25Q86VW2 580 aa11.59□□□□□ -0.55
TSPAN1-205ENST00000472170 NME9Q86XW9 330 aa11.59□□□□□ -0.55
TSPAN1-205ENST00000472170 SSH2Q76I76 1423 aa11.59□□□□□ -0.55
TSPAN1-205ENST00000472170 CRYBG1Q9Y4K1 1723 aa11.57□□□□□ -0.56
TSPAN1-205ENST00000472170 USP31Q70CQ4 1352 aa11.57□□□□□ -0.56
TSPAN1-205ENST00000472170 AMPHP49418 695 aa11.57□□□□□ -0.56
TSPAN1-205ENST00000472170 BLMP54132 1417 aaPredicted RBP11.57□□□□□ -0.56
TSPAN1-205ENST00000472170 CRB1P82279 1406 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms