RNA–Protein interactions for RNA: ENST00000472024.2

CHMP2B-204, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 5

Gene CHMP2B, Length 836 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-204ENST00000472024 CCER2I3L3R5 266 aa26.49■■□□□ 1.83
CHMP2B-204ENST00000472024 FYB1O15117 783 aa26.49■■□□□ 1.83
CHMP2B-204ENST00000472024 SLAIN2Q9P270 581 aa26.49■■□□□ 1.83
CHMP2B-204ENST00000472024 USP54Q70EL1 1684 aa26.49■■□□□ 1.83
CHMP2B-204ENST00000472024 USP31Q70CQ4 1352 aa26.46■■□□□ 1.83
CHMP2B-204ENST00000472024 TRPM3Q9HCF6 1732 aaPredicted RBP26.46■■□□□ 1.83
CHMP2B-204ENST00000472024 CC2D1BQ5T0F9 858 aaKnown RBP26.46■■□□□ 1.83
CHMP2B-204ENST00000472024 BRINP3Q76B58 766 aa26.45■■□□□ 1.82
CHMP2B-204ENST00000472024 MYBBP1AQ9BQG0 1328 aaKnown RBP26.44■■□□□ 1.82
CHMP2B-204ENST00000472024 OVOS2A0A0J9YW53 1432 aa26.44■■□□□ 1.82
CHMP2B-204ENST00000472024 OVOS2Q6IE36 1432 aa26.44■■□□□ 1.82
CHMP2B-204ENST00000472024 SCAF1Q9H7N4 1312 aaKnown RBP26.43■■□□□ 1.82
CHMP2B-204ENST00000472024 PXDNQ92626 1479 aa26.42■■□□□ 1.82
CHMP2B-204ENST00000472024 PIK3C2AO00443 1686 aa26.42■■□□□ 1.82
CHMP2B-204ENST00000472024 NPHP3Q7Z494 1330 aa26.41■■□□□ 1.82
CHMP2B-204ENST00000472024 SBNO1A3KN83 1393 aa26.41■■□□□ 1.82
CHMP2B-204ENST00000472024 NHSL1Q5SYE7 1610 aa26.4■■□□□ 1.82
CHMP2B-204ENST00000472024 FOXO3O43524 673 aa26.39■■□□□ 1.82
CHMP2B-204ENST00000472024 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.39■■□□□ 1.822e-7■■■■□ 24.8
CHMP2B-204ENST00000472024 PSME1Q06323 249 aa26.38■■□□□ 1.81
CHMP2B-204ENST00000472024 NME9Q86XW9 330 aa26.38■■□□□ 1.81
CHMP2B-204ENST00000472024 MORC1Q86VD1 984 aa26.37■■□□□ 1.81
CHMP2B-204ENST00000472024 NLRP13Q86W25 1043 aa26.37■■□□□ 1.81
CHMP2B-204ENST00000472024 GGNBP2Q9H3C7 697 aa26.37■■□□□ 1.81
CHMP2B-204ENST00000472024 ALS2Q96Q42 1657 aa26.37■■□□□ 1.81
CHMP2B-204ENST00000472024 MARF1Q9Y4F3 1742 aaKnown RBP26.36■■□□□ 1.81
CHMP2B-204ENST00000472024 AATKQ6ZMQ8 1374 aa26.36■■□□□ 1.81
CHMP2B-204ENST00000472024 PPP2R1AP30153 589 aa26.36■■□□□ 1.81
CHMP2B-204ENST00000472024 SOS2Q07890 1332 aaPredicted RBP26.36■■□□□ 1.81
CHMP2B-204ENST00000472024 KRT28Q7Z3Y7 464 aa26.35■■□□□ 1.81
CHMP2B-204ENST00000472024 AHDC1Q5TGY3 1603 aaPredicted RBP26.35■■□□□ 1.81
CHMP2B-204ENST00000472024 COG3Q96JB2 828 aa26.33■■□□□ 1.81
CHMP2B-204ENST00000472024 ROBO1Q9Y6N7 1651 aa26.33■■□□□ 1.81
CHMP2B-204ENST00000472024 SMG6Q86US8 1419 aaKnown RBP26.32■■□□□ 1.8
CHMP2B-204ENST00000472024 CERKQ8TCT0 537 aa26.32■■□□□ 1.8
CHMP2B-204ENST00000472024 TOM1O60784 492 aa26.31■■□□□ 1.8
CHMP2B-204ENST00000472024 TNS3Q68CZ2 1445 aa26.31■■□□□ 1.8
CHMP2B-204ENST00000472024 ZRANB1Q9UGI0 708 aa26.3■■□□□ 1.8
CHMP2B-204ENST00000472024 SLIT3O75094 1523 aa26.29■■□□□ 1.8
CHMP2B-204ENST00000472024 MED1Q15648 1581 aaPredicted RBP26.29■■□□□ 1.8
CHMP2B-204ENST00000472024 USP19O94966 1318 aa26.28■■□□□ 1.8
CHMP2B-204ENST00000472024 SPATA31A3Q5VYP0 1347 aa26.28■■□□□ 1.8
CHMP2B-204ENST00000472024 CNGB1Q14028 1251 aaPredicted RBP26.27■■□□□ 1.8
CHMP2B-204ENST00000472024 ABTB2Q8N961 1025 aa26.27■■□□□ 1.8
CHMP2B-204ENST00000472024 INSRP06213 1382 aa26.27■■□□□ 1.8
CHMP2B-204ENST00000472024 ARHGEF10O15013 1369 aa26.26■■□□□ 1.79
CHMP2B-204ENST00000472024 CCDC184Q52MB2 194 aa26.25■■□□□ 1.79
CHMP2B-204ENST00000472024 PNPLA6Q8IY17 1366 aa26.24■■□□□ 1.79
CHMP2B-204ENST00000472024 PAK3O75914 559 aaPredicted RBP26.24■■□□□ 1.79
CHMP2B-204ENST00000472024 NLRP6P59044 892 aa26.24■■□□□ 1.79
CHMP2B-204ENST00000472024 XPCQ01831 940 aaPredicted RBP26.24■■□□□ 1.79
CHMP2B-204ENST00000472024 DDX17Q92841 729 aaKnown RBP26.24■■□□□ 1.79
CHMP2B-204ENST00000472024 NFAT5O94916 1531 aa26.23■■□□□ 1.79
CHMP2B-204ENST00000472024 MRS2Q9HD23 443 aa26.22■■□□□ 1.79
CHMP2B-204ENST00000472024 CRYBG1Q9Y4K1 1723 aa26.22■■□□□ 1.79
CHMP2B-204ENST00000472024 KIF24Q5T7B8 1368 aa26.2■■□□□ 1.79
CHMP2B-204ENST00000472024 COL3A1P02461 1466 aaPredicted RBP26.2■■□□□ 1.78
CHMP2B-204ENST00000472024 CDK12Q9NYV4 1490 aaPredicted RBP26.2■■□□□ 1.78
CHMP2B-204ENST00000472024 POLKQ9UBT6 870 aa26.2■■□□□ 1.78
CHMP2B-204ENST00000472024 PHRF1Q9P1Y6 1649 aaKnown RBP26.19■■□□□ 1.78
CHMP2B-204ENST00000472024 ILDR2Q71H61 639 aa26.19■■□□□ 1.78
CHMP2B-204ENST00000472024 UBAP1LF5GYI3 381 aa26.18■■□□□ 1.78
CHMP2B-204ENST00000472024 MTHFSP49914 203 aa26.18■■□□□ 1.78
CHMP2B-204ENST00000472024 MAP2P11137 1827 aaKnown RBP26.18■■□□□ 1.78
CHMP2B-204ENST00000472024 COL16A1Q07092 1604 aaPredicted RBP26.17■■□□□ 1.78
CHMP2B-204ENST00000472024 TNNT2P45379 298 aaPredicted RBP26.17■■□□□ 1.78
CHMP2B-204ENST00000472024 KCNH5Q8NCM2 988 aa26.17■■□□□ 1.78
CHMP2B-204ENST00000472024 PNISRQ8TF01 805 aaKnown RBP26.17■■□□□ 1.78
CHMP2B-204ENST00000472024 COL22A1Q8NFW1 1626 aaPredicted RBP26.14■■□□□ 1.78
CHMP2B-204ENST00000472024 RTL1A6NKG5 1358 aa26.13■■□□□ 1.77
CHMP2B-204ENST00000472024 SOCS7O14512 581 aa26.13■■□□□ 1.77
CHMP2B-204ENST00000472024 NUTM2GQ5VZR2 741 aa26.13■■□□□ 1.77
CHMP2B-204ENST00000472024 PEAK1Q9H792 1746 aa26.13■■□□□ 1.77
CHMP2B-204ENST00000472024 PHLPP1O60346 1717 aa26.12■■□□□ 1.77
CHMP2B-204ENST00000472024 LRRC59Q96AG4 307 aaKnown RBP26.12■■□□□ 1.77
CHMP2B-204ENST00000472024 SHPRHQ149N8 1683 aa26.12■■□□□ 1.77
CHMP2B-204ENST00000472024 ABCC6O95255 1503 aa26.11■■□□□ 1.77
CHMP2B-204ENST00000472024 GCP02774 474 aa26.11■■□□□ 1.77
CHMP2B-204ENST00000472024 CFAP53Q96M91 514 aa26.11■■□□□ 1.77
CHMP2B-204ENST00000472024 EMILIN1Q9Y6C2 1016 aa26.11■■□□□ 1.77
CHMP2B-204ENST00000472024 MAP3K19Q56UN5 1328 aa26.11■■□□□ 1.77
CHMP2B-204ENST00000472024 FBLN1P23142 703 aa26.1■■□□□ 1.77
CHMP2B-204ENST00000472024 ABCA3Q99758 1704 aa26.1■■□□□ 1.77
CHMP2B-204ENST00000472024 RRS1Q15050 365 aaKnown RBP26.09■■□□□ 1.77
CHMP2B-204ENST00000472024 CPDO75976 1380 aa26.08■■□□□ 1.77
CHMP2B-204ENST00000472024 FLT4P35916 1363 aa26.08■■□□□ 1.77
CHMP2B-204ENST00000472024 ARHGEF25Q86VW2 580 aa26.07■■□□□ 1.76
CHMP2B-204ENST00000472024 LTN1O94822 1766 aa26.06■■□□□ 1.76
CHMP2B-204ENST00000472024 LMOD2Q6P5Q4 547 aa26.06■■□□□ 1.76
CHMP2B-204ENST00000472024 PIP4K2BP78356 416 aa26.05■■□□□ 1.76
CHMP2B-204ENST00000472024 IP6K1Q92551 441 aa26.02■■□□□ 1.76
CHMP2B-204ENST00000472024 HOXC9P31274 260 aa26.01■■□□□ 1.75
CHMP2B-204ENST00000472024 IL13P35225 146 aa26.01■■□□□ 1.75
CHMP2B-204ENST00000472024 COL18A1P39060 1754 aa26.01■■□□□ 1.75
CHMP2B-204ENST00000472024 BLMP54132 1417 aaPredicted RBP26.01■■□□□ 1.75
CHMP2B-204ENST00000472024 DIAPH1O60610 1272 aaKnown RBP26■■□□□ 1.75
CHMP2B-204ENST00000472024 RGPD1P0DJD0 1748 aa25.99■■□□□ 1.75
CHMP2B-204ENST00000472024 SOX12O15370 315 aa25.98■■□□□ 1.75
CHMP2B-204ENST00000472024 AMPHP49418 695 aa25.97■■□□□ 1.75
CHMP2B-204ENST00000472024 WDR43Q15061 677 aaKnown RBP eCLIP25.97■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms