RNA–Protein interactions for RNA: ENST00000471824.6

PDE6B-207, Transcript of phosphodiesterase 6B, humanhuman

TSL 5

Gene PDE6B, Length 580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-207ENST00000471824 TRPM3Q9HCF6 1732 aaPredicted RBP13.5□□□□□ -0.25
PDE6B-207ENST00000471824 PLCH1Q4KWH8 1693 aa13.5□□□□□ -0.25
PDE6B-207ENST00000471824 ATP7BP35670 1465 aa13.5□□□□□ -0.25
PDE6B-207ENST00000471824 SPATA31A5Q5VU36 1347 aa13.5□□□□□ -0.25
PDE6B-207ENST00000471824 SPATA31A7Q8IWB4 1347 aa13.5□□□□□ -0.25
PDE6B-207ENST00000471824 PAK3O75914 559 aaPredicted RBP13.5□□□□□ -0.25
PDE6B-207ENST00000471824 PRDM11Q9NQV5 511 aa13.5□□□□□ -0.25
PDE6B-207ENST00000471824 BAG6P46379 1132 aa13.49□□□□□ -0.25
PDE6B-207ENST00000471824 ALS2Q96Q42 1657 aa13.49□□□□□ -0.25
PDE6B-207ENST00000471824 CDK19Q9BWU1 502 aa13.48□□□□□ -0.25
PDE6B-207ENST00000471824 CCDC61Q9Y6R9 512 aa13.48□□□□□ -0.25
PDE6B-207ENST00000471824 COL14A1Q05707 1796 aaKnown RBP13.48□□□□□ -0.25
PDE6B-207ENST00000471824 POLR3AO14802 1390 aaPredicted RBP13.47□□□□□ -0.25
PDE6B-207ENST00000471824 PLEKHG3A1L390 1219 aa13.46□□□□□ -0.25
PDE6B-207ENST00000471824 NRAPQ86VF7 1730 aa13.46□□□□□ -0.25
PDE6B-207ENST00000471824 KIAA0232Q92628 1395 aa13.45□□□□□ -0.26
PDE6B-207ENST00000471824 SPATA31A1Q5TZJ5 1347 aa13.45□□□□□ -0.26
PDE6B-207ENST00000471824 NBPF8Q3BBV2 869 aa13.45□□□□□ -0.26
PDE6B-207ENST00000471824 ACEP12821 1306 aa13.44□□□□□ -0.26
PDE6B-207ENST00000471824 BRWD3Q6RI45 1802 aa13.44□□□□□ -0.26
PDE6B-207ENST00000471824 DISP2A7MBM2 1401 aa13.43□□□□□ -0.26
PDE6B-207ENST00000471824 ARHGEF28Q8N1W1 1705 aaKnown RBP13.42□□□□□ -0.26
PDE6B-207ENST00000471824 ZC3H6P61129 1189 aaKnown RBP13.42□□□□□ -0.26
PDE6B-207ENST00000471824 CHRNA2Q15822 529 aa13.42□□□□□ -0.26
PDE6B-207ENST00000471824 NBPF1Q3BBV0 1214 aa13.42□□□□□ -0.26
PDE6B-207ENST00000471824 CPDO75976 1380 aa13.42□□□□□ -0.26
PDE6B-207ENST00000471824 THSD7AQ9UPZ6 1657 aa13.41□□□□□ -0.26
PDE6B-207ENST00000471824 EN1Q05925 392 aaPredicted RBP13.41□□□□□ -0.26
PDE6B-207ENST00000471824 FAM182BQ5T319 152 aa13.41□□□□□ -0.26
PDE6B-207ENST00000471824 NUTM2GQ5VZR2 741 aa13.41□□□□□ -0.26
PDE6B-207ENST00000471824 FAM196AQ6ZSG2 479 aa13.41□□□□□ -0.26
PDE6B-207ENST00000471824 BARGINQ6ZT62 677 aa13.41□□□□□ -0.26
PDE6B-207ENST00000471824 ABTB2Q8N961 1025 aa13.41□□□□□ -0.26
PDE6B-207ENST00000471824 STRN4Q9NRL3 753 aa13.41□□□□□ -0.26
PDE6B-207ENST00000471824 BRD4O60885 1362 aaPredicted RBP13.41□□□□□ -0.26
PDE6B-207ENST00000471824 CRYBG1Q9Y4K1 1723 aa13.41□□□□□ -0.26
PDE6B-207ENST00000471824 USP19O94966 1318 aa13.4□□□□□ -0.26
PDE6B-207ENST00000471824 ITSN1Q15811 1721 aa13.4□□□□□ -0.26
PDE6B-207ENST00000471824 EVA1CP58658 441 aa13.4□□□□□ -0.26
PDE6B-207ENST00000471824 CENPJQ9HC77 1338 aaPredicted RBP13.39□□□□□ -0.27
PDE6B-207ENST00000471824 SRPK2P78362 688 aaKnown RBP13.39□□□□□ -0.27
PDE6B-207ENST00000471824 NLRP13Q86W25 1043 aa13.39□□□□□ -0.27
PDE6B-207ENST00000471824 KIAA1210Q9ULL0 1709 aa13.39□□□□□ -0.27
PDE6B-207ENST00000471824 SSH2Q76I76 1423 aa13.39□□□□□ -0.27
PDE6B-207ENST00000471824 PSDA5PKW4 1024 aaPredicted RBP13.38□□□□□ -0.27
PDE6B-207ENST00000471824 PPIP5K1Q6PFW1 1433 aa13.38□□□□□ -0.27
PDE6B-207ENST00000471824 TOPAZ1Q8N9V7 1692 aa13.37□□□□□ -0.27
PDE6B-207ENST00000471824 PARD3Q8TEW0 1356 aa13.37□□□□□ -0.27
PDE6B-207ENST00000471824 GCP02774 474 aa13.37□□□□□ -0.27
PDE6B-207ENST00000471824 TCP11L2Q8N4U5 519 aa13.37□□□□□ -0.27
PDE6B-207ENST00000471824 USP35Q9P2H5 1018 aa13.37□□□□□ -0.27
PDE6B-207ENST00000471824 THRAP3Q9Y2W1 955 aaKnown RBP13.37□□□□□ -0.27
PDE6B-207ENST00000471824 LRP5O75197 1615 aa13.37□□□□□ -0.27
PDE6B-207ENST00000471824 PHRF1Q9P1Y6 1649 aaKnown RBP13.36□□□□□ -0.27
PDE6B-207ENST00000471824 TRIM37O94972 964 aa13.36□□□□□ -0.27
PDE6B-207ENST00000471824 PDE3BQ13370 1112 aa13.36□□□□□ -0.27
PDE6B-207ENST00000471824 LARP1Q6PKG0 1096 aaKnown RBP13.36□□□□□ -0.27
PDE6B-207ENST00000471824 CAMKK2Q96RR4 588 aa13.36□□□□□ -0.27
PDE6B-207ENST00000471824 CABP2Q9NPB3 220 aa13.36□□□□□ -0.27
PDE6B-207ENST00000471824 CAMTA1Q9Y6Y1 1673 aa13.35□□□□□ -0.27
PDE6B-207ENST00000471824 R3HDM1Q15032 1099 aaKnown RBP13.35□□□□□ -0.27
PDE6B-207ENST00000471824 EZH2Q15910 746 aaKnown RBP13.35□□□□□ -0.27
PDE6B-207ENST00000471824 NRKQ7Z2Y5 1582 aa13.35□□□□□ -0.27
PDE6B-207ENST00000471824 RGPD1P0DJD0 1748 aa13.34□□□□□ -0.27
PDE6B-207ENST00000471824 C11orf95C9JLR9 678 aaPredicted RBP13.34□□□□□ -0.27
PDE6B-207ENST00000471824 APBA3O96018 575 aa13.34□□□□□ -0.27
PDE6B-207ENST00000471824 CABP1Q9NZU7 370 aa13.34□□□□□ -0.27
PDE6B-207ENST00000471824 USP6P35125 1406 aa13.33□□□□□ -0.28
PDE6B-207ENST00000471824 L3MBTL2Q969R5 705 aa13.33□□□□□ -0.28
PDE6B-207ENST00000471824 AATKQ6ZMQ8 1374 aa13.32□□□□□ -0.28
PDE6B-207ENST00000471824 COL5A2P05997 1499 aaPredicted RBP13.32□□□□□ -0.28
PDE6B-207ENST00000471824 NLRP6P59044 892 aa13.32□□□□□ -0.28
PDE6B-207ENST00000471824 EVC2Q86UK5 1308 aa13.32□□□□□ -0.28
PDE6B-207ENST00000471824 LMO7Q8WWI1 1683 aa13.31□□□□□ -0.28
PDE6B-207ENST00000471824 CRB1P82279 1406 aa13.3□□□□□ -0.28
PDE6B-207ENST00000471824 ZNF692Q9BU19 519 aaPredicted RBP13.3□□□□□ -0.28
PDE6B-207ENST00000471824 TNS1Q9HBL0 1735 aaKnown RBP13.3□□□□□ -0.28
PDE6B-207ENST00000471824 SLIT3O75094 1523 aa13.29□□□□□ -0.28
PDE6B-207ENST00000471824 NBPF14Q5TI25 921 aa13.28□□□□□ -0.28
PDE6B-207ENST00000471824 KCNH5Q8NCM2 988 aa13.28□□□□□ -0.28
PDE6B-207ENST00000471824 TOM1L2Q6ZVM7 507 aa13.27□□□□□ -0.29
PDE6B-207ENST00000471824 ROCK2O75116 1388 aaKnown RBP13.27□□□□□ -0.29
PDE6B-207ENST00000471824 OVOS2A0A0G2JMS6 1433 aa13.27□□□□□ -0.29
PDE6B-207ENST00000471824 OVOS2A0A0J9YW53 1432 aa13.27□□□□□ -0.29
PDE6B-207ENST00000471824 OVOS2Q6IE36 1432 aa13.27□□□□□ -0.29
PDE6B-207ENST00000471824 ZBTB7CA1YPR0 619 aa13.26□□□□□ -0.29
PDE6B-207ENST00000471824 DDB1Q16531 1140 aa13.26□□□□□ -0.29
PDE6B-207ENST00000471824 TTC21BQ7Z4L5 1316 aa13.26□□□□□ -0.29
PDE6B-207ENST00000471824 ARHGEF25Q86VW2 580 aa13.26□□□□□ -0.29
PDE6B-207ENST00000471824 WDR17Q8IZU2 1322 aa13.26□□□□□ -0.29
PDE6B-207ENST00000471824 TTC21AQ8NDW8 1320 aa13.26□□□□□ -0.29
PDE6B-207ENST00000471824 CDCA7Q9BWT1 371 aaPredicted RBP13.26□□□□□ -0.29
PDE6B-207ENST00000471824 QRICH2Q9H0J4 1663 aa13.25□□□□□ -0.29
PDE6B-207ENST00000471824 CPSF1Q10570 1443 aaKnown RBP13.25□□□□□ -0.29
PDE6B-207ENST00000471824 PLSCR1O15162 318 aa13.25□□□□□ -0.29
PDE6B-207ENST00000471824 SIN3AQ96ST3 1273 aa13.25□□□□□ -0.29
PDE6B-207ENST00000471824 AXIN2Q9Y2T1 843 aa13.25□□□□□ -0.29
PDE6B-207ENST00000471824 BCL9O00512 1426 aa13.23□□□□□ -0.29
PDE6B-207ENST00000471824 SBNO2Q9Y2G9 1366 aa13.23□□□□□ -0.29
PDE6B-207ENST00000471824 PARP4Q9UKK3 1724 aaKnown RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms